RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 EML2O95834 649 aa13.31□□□□□ -0.28
HMGN1-211ENST00000471260 XRCC1P18887 633 aaPredicted RBP13.31□□□□□ -0.28
HMGN1-211ENST00000471260 TNFRSF8P28908 595 aa13.31□□□□□ -0.28
HMGN1-211ENST00000471260 ETV5P41161 510 aa13.31□□□□□ -0.28
HMGN1-211ENST00000471260 TSPAN7P41732 249 aa13.31□□□□□ -0.28
HMGN1-211ENST00000471260 MARCKSL1P49006 195 aa13.31□□□□□ -0.28
HMGN1-211ENST00000471260 MAPK10P53779 464 aa13.31□□□□□ -0.28
HMGN1-211ENST00000471260 RWDD2BP57060 319 aa13.31□□□□□ -0.28
HMGN1-211ENST00000471260 RAB15P59190 212 aa13.31□□□□□ -0.28
HMGN1-211ENST00000471260 CFHR1Q03591 330 aa13.31□□□□□ -0.28
HMGN1-211ENST00000471260 NOMO1Q15155 1222 aa13.31□□□□□ -0.28
HMGN1-211ENST00000471260 LLGL1Q15334 1064 aa13.31□□□□□ -0.28
HMGN1-211ENST00000471260 TAF1BQ53T94 588 aaPredicted RBP13.31□□□□□ -0.28
HMGN1-211ENST00000471260 HSP90B2PQ58FF3 399 aa13.31□□□□□ -0.28
HMGN1-211ENST00000471260 SIRPB2Q5JXA9 342 aa13.31□□□□□ -0.28
HMGN1-211ENST00000471260 CCDC181Q5TID7 509 aa13.31□□□□□ -0.28
HMGN1-211ENST00000471260 NKAIN2Q5VXU1 208 aa13.31□□□□□ -0.28
HMGN1-211ENST00000471260 ITPRIPL1Q6GPH6 555 aa13.31□□□□□ -0.28
HMGN1-211ENST00000471260 MMGT1Q8N4V1 131 aa13.31□□□□□ -0.28
HMGN1-211ENST00000471260 RCBTB1Q8NDN9 531 aa13.31□□□□□ -0.28
HMGN1-211ENST00000471260 PPP1R2P1Q96PQ5 205 aa13.31□□□□□ -0.28
HMGN1-211ENST00000471260 DDA1Q9BW61 102 aa13.31□□□□□ -0.28
HMGN1-211ENST00000471260 FSD1LQ9BXM9 530 aa13.31□□□□□ -0.28
HMGN1-211ENST00000471260 ASPSCR1Q9BZE9 553 aa13.31□□□□□ -0.28
HMGN1-211ENST00000471260 KLC4Q9NSK0 619 aa13.31□□□□□ -0.28
HMGN1-211ENST00000471260 IL17CQ9P0M4 197 aa13.31□□□□□ -0.28
HMGN1-211ENST00000471260 CPNE7Q9UBL6 633 aa13.31□□□□□ -0.28
HMGN1-211ENST00000471260 RSPH14Q9UHP6 348 aa13.31□□□□□ -0.28
HMGN1-211ENST00000471260 SNX12Q9UMY4 172 aa13.31□□□□□ -0.28
HMGN1-211ENST00000471260 TFR2Q9UP52 801 aa13.31□□□□□ -0.28
HMGN1-211ENST00000471260 AAR2Q9Y312 384 aaKnown RBP13.31□□□□□ -0.28
HMGN1-211ENST00000471260 SPO11Q9Y5K1 396 aa13.31□□□□□ -0.28
HMGN1-211ENST00000471260 STMND1H3BQB6 276 aa13.3□□□□□ -0.28
HMGN1-211ENST00000471260 H7C0C1 242 aa13.3□□□□□ -0.28
HMGN1-211ENST00000471260 AURKAO14965 403 aa13.3□□□□□ -0.28
HMGN1-211ENST00000471260 SNX2O60749 519 aa13.3□□□□□ -0.28
HMGN1-211ENST00000471260 SLC4A1P02730 911 aa13.3□□□□□ -0.28
HMGN1-211ENST00000471260 FGF3P11487 239 aaPredicted RBP13.3□□□□□ -0.28
HMGN1-211ENST00000471260 CCL4P13236 92 aa13.3□□□□□ -0.28
HMGN1-211ENST00000471260 ZNF7P17097 686 aaPredicted RBP13.3□□□□□ -0.28
HMGN1-211ENST00000471260 VCLP18206 1134 aa13.3□□□□□ -0.28
HMGN1-211ENST00000471260 CTNNA2P26232 953 aa13.3□□□□□ -0.28
HMGN1-211ENST00000471260 CSF2RBP32927 897 aa13.3□□□□□ -0.28
HMGN1-211ENST00000471260 SPAM1P38567 509 aa13.3□□□□□ -0.28
HMGN1-211ENST00000471260 ATP5OP48047 213 aa13.3□□□□□ -0.28
HMGN1-211ENST00000471260 GEMP55040 296 aa13.3□□□□□ -0.28
HMGN1-211ENST00000471260 NAP1L1P55209 391 aaKnown RBP13.3□□□□□ -0.28
HMGN1-211ENST00000471260 VSNL1P62760 191 aa13.3□□□□□ -0.28
HMGN1-211ENST00000471260 UBE2IP63279 158 aaKnown RBP13.3□□□□□ -0.28
HMGN1-211ENST00000471260 TMEM115Q12893 351 aaPredicted RBP13.3□□□□□ -0.28
HMGN1-211ENST00000471260 ITGA9Q13797 1035 aa13.3□□□□□ -0.28
HMGN1-211ENST00000471260 GTF2H3Q13889 308 aa13.3□□□□□ -0.28
HMGN1-211ENST00000471260 INSCQ1MX18 579 aa13.3□□□□□ -0.28
HMGN1-211ENST00000471260 ATP13A5Q4VNC0 1218 aa13.3□□□□□ -0.28
HMGN1-211ENST00000471260 FAM182AQ5T1J6 154 aa13.3□□□□□ -0.28
HMGN1-211ENST00000471260 PCSK4Q6UW60 755 aa13.3□□□□□ -0.28
HMGN1-211ENST00000471260 ABRAXAS1Q6UWZ7 409 aa13.3□□□□□ -0.28
HMGN1-211ENST00000471260 XKR5Q6UX68 686 aa13.3□□□□□ -0.28
HMGN1-211ENST00000471260 WASH2PQ6VEQ5 465 aa13.3□□□□□ -0.28
HMGN1-211ENST00000471260 GLT6D1Q7Z4J2 308 aa13.3□□□□□ -0.28
HMGN1-211ENST00000471260 RBM12BQ8IXT5 1001 aaKnown RBP13.3□□□□□ -0.28
HMGN1-211ENST00000471260 TTC30BQ8N4P2 665 aa13.3□□□□□ -0.28
HMGN1-211ENST00000471260 TTC9Q92623 222 aa13.3□□□□□ -0.28
HMGN1-211ENST00000471260 HAUS1Q96CS2 278 aa13.3□□□□□ -0.28
HMGN1-211ENST00000471260 OXNAD1Q96HP4 312 aaPredicted RBP13.3□□□□□ -0.28
HMGN1-211ENST00000471260 TTC25Q96NG3 672 aa13.3□□□□□ -0.28
HMGN1-211ENST00000471260 TEFMQ96QE5 360 aaKnown RBP13.3□□□□□ -0.28
HMGN1-211ENST00000471260 C19orf43Q9BQ61 176 aa13.3□□□□□ -0.28
HMGN1-211ENST00000471260 HEMGNQ9BXL5 484 aa13.3□□□□□ -0.28
HMGN1-211ENST00000471260 OSBPL8Q9BZF1 889 aa13.3□□□□□ -0.28
HMGN1-211ENST00000471260 ZCCHC2Q9C0B9 1178 aaKnown RBP13.3□□□□□ -0.28
HMGN1-211ENST00000471260 GBA3Q9H227 469 aa13.3□□□□□ -0.28
HMGN1-211ENST00000471260 IL26Q9NPH9 171 aa13.3□□□□□ -0.28
HMGN1-211ENST00000471260 WASH6PQ9NQA3 447 aa13.3□□□□□ -0.28
HMGN1-211ENST00000471260 FOXJ2Q9P0K8 574 aa13.3□□□□□ -0.28
HMGN1-211ENST00000471260 PKP3Q9Y446 797 aa13.3□□□□□ -0.28
HMGN1-211ENST00000471260 DNMT3AQ9Y6K1 912 aaPredicted RBP13.3□□□□□ -0.28
HMGN1-211ENST00000471260 FASNP49327 2511 aaKnown RBP13.29□□□□□ -0.28
HMGN1-211ENST00000471260 RCCD1A6NED2 376 aa13.29□□□□□ -0.28
HMGN1-211ENST00000471260 PRR19A6NJB7 356 aa13.29□□□□□ -0.28
HMGN1-211ENST00000471260 CES2O00748 559 aa13.29□□□□□ -0.28
HMGN1-211ENST00000471260 EFSO43281 561 aa13.29□□□□□ -0.28
HMGN1-211ENST00000471260 STK10O94804 968 aaKnown RBP13.29□□□□□ -0.28
HMGN1-211ENST00000471260 TJP3O95049 919 aa13.29□□□□□ -0.28
HMGN1-211ENST00000471260 IDSP22304 550 aa13.29□□□□□ -0.28
HMGN1-211ENST00000471260 RBL1P28749 1068 aa13.29□□□□□ -0.28
HMGN1-211ENST00000471260 OTUD4Q01804 1114 aaKnown RBP13.29□□□□□ -0.28
HMGN1-211ENST00000471260 NFATC2Q13469 925 aa13.29□□□□□ -0.28
HMGN1-211ENST00000471260 CASP8Q14790 479 aa13.29□□□□□ -0.28
HMGN1-211ENST00000471260 GLE1Q53GS7 698 aaKnown RBP13.29□□□□□ -0.28
HMGN1-211ENST00000471260 MANEAQ5SRI9 462 aa13.29□□□□□ -0.28
HMGN1-211ENST00000471260 LDLRAP1Q5SW96 308 aa13.29□□□□□ -0.28
HMGN1-211ENST00000471260 ZNF648Q5T619 568 aaPredicted RBP13.29□□□□□ -0.28
HMGN1-211ENST00000471260 AGAP9Q5VTM2 703 aa13.29□□□□□ -0.28
HMGN1-211ENST00000471260 ARHGAP22Q7Z5H3 698 aa13.29□□□□□ -0.28
HMGN1-211ENST00000471260 PLXDC1Q8IUK5 500 aa13.29□□□□□ -0.28
HMGN1-211ENST00000471260 CDKL3Q8IVW4 592 aaPredicted RBP13.29□□□□□ -0.28
HMGN1-211ENST00000471260 SLC25A41Q8N5S1 370 aa13.29□□□□□ -0.28
HMGN1-211ENST00000471260 ZSCAN1Q8NBB4 408 aa13.29□□□□□ -0.28
HMGN1-211ENST00000471260 IPMKQ8NFU5 416 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms