RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 CCR10P46092 362 aa8.98□□□□□ -0.97
SF3A1-206ENST00000471037 ACTR1AP61163 376 aa8.98□□□□□ -0.97
SF3A1-206ENST00000471037 SLC7A5Q01650 507 aa8.98□□□□□ -0.97
SF3A1-206ENST00000471037 GUCY2DQ02846 1103 aa8.98□□□□□ -0.97
SF3A1-206ENST00000471037 TRAF2Q12933 501 aa8.98□□□□□ -0.97
SF3A1-206ENST00000471037 ZBTB17Q13105 803 aa8.98□□□□□ -0.97
SF3A1-206ENST00000471037 BIRC2Q13490 618 aa8.98□□□□□ -0.97
SF3A1-206ENST00000471037 LRP8Q14114 963 aa8.98□□□□□ -0.97
SF3A1-206ENST00000471037 ZNF235Q14590 738 aa8.98□□□□□ -0.97
SF3A1-206ENST00000471037 ERCC6LQ2NKX8 1250 aa8.98□□□□□ -0.97
SF3A1-206ENST00000471037 ANKRD20A2Q5SQ80 823 aa8.98□□□□□ -0.97
SF3A1-206ENST00000471037 DCAF12Q5T6F0 453 aa8.98□□□□□ -0.97
SF3A1-206ENST00000471037 ANKRD20A1Q5TYW2 823 aa8.98□□□□□ -0.97
SF3A1-206ENST00000471037 MARC1Q5VT66 337 aa8.98□□□□□ -0.97
SF3A1-206ENST00000471037 ANKRD20A3Q5VUR7 823 aa8.98□□□□□ -0.97
SF3A1-206ENST00000471037 NKAIN2Q5VXU1 208 aa8.98□□□□□ -0.97
SF3A1-206ENST00000471037 DUPD1Q68J44 220 aa8.98□□□□□ -0.97
SF3A1-206ENST00000471037 RAET1GQ6H3X3 334 aa8.98□□□□□ -0.97
SF3A1-206ENST00000471037 CLEC18BQ6UXF7 455 aa8.98□□□□□ -0.97
SF3A1-206ENST00000471037 ADAMTSL4Q6UY14 1074 aa8.98□□□□□ -0.97
SF3A1-206ENST00000471037 ARHGEF18Q6ZSZ5 1173 aa8.98□□□□□ -0.97
SF3A1-206ENST00000471037 Q6ZVL8 140 aa8.98□□□□□ -0.97
SF3A1-206ENST00000471037 PID1Q7Z2X4 250 aa8.98□□□□□ -0.97
SF3A1-206ENST00000471037 HSD11B1LQ7Z5J1 315 aa8.98□□□□□ -0.97
SF3A1-206ENST00000471037 TECPR1Q7Z6L1 1165 aa8.98□□□□□ -0.97
SF3A1-206ENST00000471037 IFT20Q8IY31 132 aa8.98□□□□□ -0.97
SF3A1-206ENST00000471037 ZNF567Q8N184 647 aa8.98□□□□□ -0.97
SF3A1-206ENST00000471037 BMPERQ8N8U9 685 aa8.98□□□□□ -0.97
SF3A1-206ENST00000471037 CLEC18CQ8NCF0 446 aa8.98□□□□□ -0.97
SF3A1-206ENST00000471037 BBOF1Q8ND07 529 aa8.98□□□□□ -0.97
SF3A1-206ENST00000471037 CCDC110Q8TBZ0 833 aa8.98□□□□□ -0.97
SF3A1-206ENST00000471037 LRRN4Q8WUT4 740 aa8.98□□□□□ -0.97
SF3A1-206ENST00000471037 SEC14L1Q92503 715 aa8.98□□□□□ -0.97
SF3A1-206ENST00000471037 SCRN2Q96FV2 425 aa8.98□□□□□ -0.97
SF3A1-206ENST00000471037 TEKT5Q96M29 485 aa8.98□□□□□ -0.97
SF3A1-206ENST00000471037 PPP1R2P1Q96PQ5 205 aa8.98□□□□□ -0.97
SF3A1-206ENST00000471037 OR2M4Q96R27 311 aa8.98□□□□□ -0.97
SF3A1-206ENST00000471037 MGME1Q9BQP7 344 aa8.98□□□□□ -0.97
SF3A1-206ENST00000471037 FAM129AQ9BZQ8 928 aa8.98□□□□□ -0.97
SF3A1-206ENST00000471037 SPRY4Q9C004 299 aa8.98□□□□□ -0.97
SF3A1-206ENST00000471037 EPN3Q9H201 632 aa8.98□□□□□ -0.97
SF3A1-206ENST00000471037 GBA3Q9H227 469 aa8.98□□□□□ -0.97
SF3A1-206ENST00000471037 SUDS3Q9H7L9 328 aaPredicted RBP8.98□□□□□ -0.97
SF3A1-206ENST00000471037 RBM22Q9NW64 420 aaKnown RBP eCLIP8.98□□□□□ -0.97
SF3A1-206ENST00000471037 OCIAD1Q9NX40 245 aa8.98□□□□□ -0.97
SF3A1-206ENST00000471037 SLC39A1Q9NY26 324 aa8.98□□□□□ -0.97
SF3A1-206ENST00000471037 KCNK4Q9NYG8 393 aa8.98□□□□□ -0.97
SF3A1-206ENST00000471037 TMEM9Q9P0T7 183 aa8.98□□□□□ -0.97
SF3A1-206ENST00000471037 WHRNQ9P202 907 aa8.98□□□□□ -0.97
SF3A1-206ENST00000471037 ANKMY1Q9P2S6 941 aa8.98□□□□□ -0.97
SF3A1-206ENST00000471037 DMGDHQ9UI17 866 aaKnown RBP8.98□□□□□ -0.97
SF3A1-206ENST00000471037 ANAPC2Q9UJX6 822 aa8.98□□□□□ -0.97
SF3A1-206ENST00000471037 PILRAQ9UKJ1 303 aa8.98□□□□□ -0.97
SF3A1-206ENST00000471037 PPIL1Q9Y3C6 166 aa8.98□□□□□ -0.97
SF3A1-206ENST00000471037 TTC24A2A3L6 582 aaPredicted RBP8.97□□□□□ -0.97
SF3A1-206ENST00000471037 NPIPB15A6NHN6 443 aaPredicted RBP8.97□□□□□ -0.97
SF3A1-206ENST00000471037 BHMG1C9JSJ3 638 aaPredicted RBP8.97□□□□□ -0.97
SF3A1-206ENST00000471037 SMAPO00193 183 aa8.97□□□□□ -0.97
SF3A1-206ENST00000471037 DUX1O43812 170 aa8.97□□□□□ -0.97
SF3A1-206ENST00000471037 PGLSO95336 258 aa8.97□□□□□ -0.97
SF3A1-206ENST00000471037 PYGLP06737 847 aa8.97□□□□□ -0.97
SF3A1-206ENST00000471037 ZSCAN5DPP0CG00 497 aa8.97□□□□□ -0.97
SF3A1-206ENST00000471037 ETS1P14921 441 aa8.97□□□□□ -0.97
SF3A1-206ENST00000471037 POLD2P49005 469 aa8.97□□□□□ -0.97
SF3A1-206ENST00000471037 VPS41P49754 854 aa8.97□□□□□ -0.97
SF3A1-206ENST00000471037 TERF1P54274 439 aa8.97□□□□□ -0.97
SF3A1-206ENST00000471037 MRPS25P82663 173 aaKnown RBP8.97□□□□□ -0.97
SF3A1-206ENST00000471037 FOXK1P85037 733 aa8.97□□□□□ -0.97
SF3A1-206ENST00000471037 GPS1Q13098 491 aa8.97□□□□□ -0.97
SF3A1-206ENST00000471037 CALCOCO2Q13137 446 aa8.97□□□□□ -0.97
SF3A1-206ENST00000471037 CUL1Q13616 776 aa8.97□□□□□ -0.97
SF3A1-206ENST00000471037 PRPSAP1Q14558 356 aa8.97□□□□□ -0.97
SF3A1-206ENST00000471037 TRIP13Q15645 432 aaPredicted RBP8.97□□□□□ -0.97
SF3A1-206ENST00000471037 SKIDA1Q1XH10 827 aa8.97□□□□□ -0.97
SF3A1-206ENST00000471037 PARP6Q2NL67 630 aa8.97□□□□□ -0.97
SF3A1-206ENST00000471037 PYCR3Q53H96 274 aa8.97□□□□□ -0.97
SF3A1-206ENST00000471037 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.97□□□□□ -0.97
SF3A1-206ENST00000471037 DENND2CQ68D51 928 aa8.97□□□□□ -0.97
SF3A1-206ENST00000471037 USP45Q70EL2 814 aa8.97□□□□□ -0.97
SF3A1-206ENST00000471037 ZNF765Q7L2R6 523 aa8.97□□□□□ -0.97
SF3A1-206ENST00000471037 ARHGAP22Q7Z5H3 698 aa8.97□□□□□ -0.97
SF3A1-206ENST00000471037 PCGF5Q86SE9 256 aa8.97□□□□□ -0.97
SF3A1-206ENST00000471037 TSPAN33Q86UF1 283 aa8.97□□□□□ -0.97
SF3A1-206ENST00000471037 NLRP8Q86W28 1048 aa8.97□□□□□ -0.97
SF3A1-206ENST00000471037 PTRH1Q86Y79 214 aaKnown RBP8.97□□□□□ -0.97
SF3A1-206ENST00000471037 PGBD5Q8N414 524 aa8.97□□□□□ -0.97
SF3A1-206ENST00000471037 SFRP1Q8N474 314 aa8.97□□□□□ -0.97
SF3A1-206ENST00000471037 EIF1ADQ8N9N8 165 aaKnown RBP8.97□□□□□ -0.97
SF3A1-206ENST00000471037 GLIS1Q8NBF1 620 aa8.97□□□□□ -0.97
SF3A1-206ENST00000471037 SLC37A2Q8TED4 501 aa8.97□□□□□ -0.97
SF3A1-206ENST00000471037 PDCD6IPQ8WUM4 868 aaKnown RBP8.97□□□□□ -0.97
SF3A1-206ENST00000471037 SNF8Q96H20 258 aa8.97□□□□□ -0.97
SF3A1-206ENST00000471037 AGAP3Q96P47 875 aa8.97□□□□□ -0.97
SF3A1-206ENST00000471037 EFHD1Q9BUP0 239 aa8.97□□□□□ -0.97
SF3A1-206ENST00000471037 TRIM31Q9BZY9 425 aa8.97□□□□□ -0.97
SF3A1-206ENST00000471037 ANKZF1Q9H8Y5 726 aa8.97□□□□□ -0.97
SF3A1-206ENST00000471037 NOD2Q9HC29 1040 aa8.97□□□□□ -0.97
SF3A1-206ENST00000471037 FAM114A2Q9NRY5 505 aa8.97□□□□□ -0.97
SF3A1-206ENST00000471037 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.97□□□□□ -0.97
SF3A1-206ENST00000471037 RSPH14Q9UHP6 348 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms