RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 GLT6D1Q7Z4J2 308 aa16.03■□□□□ 0.16
COL9A3-208ENST00000469802 ZNF605Q86T29 641 aa16.03■□□□□ 0.16
COL9A3-208ENST00000469802 PLXDC1Q8IUK5 500 aa16.03■□□□□ 0.16
COL9A3-208ENST00000469802 TRAPPC5Q8IUR0 188 aa16.03■□□□□ 0.16
COL9A3-208ENST00000469802 TMTC1Q8IUR5 882 aa16.03■□□□□ 0.16
COL9A3-208ENST00000469802 EXD3Q8N9H8 876 aa16.03■□□□□ 0.16
COL9A3-208ENST00000469802 LRRC57Q8N9N7 239 aa16.03■□□□□ 0.16
COL9A3-208ENST00000469802 BRSK1Q8TDC3 778 aa16.03■□□□□ 0.16
COL9A3-208ENST00000469802 BLOC1S5Q8TDH9 187 aa16.03■□□□□ 0.16
COL9A3-208ENST00000469802 JPH3Q8WXH2 748 aaPredicted RBP16.03■□□□□ 0.16
COL9A3-208ENST00000469802 FSD1LQ9BXM9 530 aa16.03■□□□□ 0.16
COL9A3-208ENST00000469802 C10orf88Q9H8K7 445 aa16.03■□□□□ 0.16
COL9A3-208ENST00000469802 FBXO8Q9NRD0 319 aa16.03■□□□□ 0.16
COL9A3-208ENST00000469802 PILRAQ9UKJ1 303 aa16.03■□□□□ 0.16
COL9A3-208ENST00000469802 SLC30A1Q9Y6M5 507 aa16.03■□□□□ 0.16
COL9A3-208ENST00000469802 DUSP10Q9Y6W6 482 aa16.03■□□□□ 0.16
COL9A3-208ENST00000469802 GLYATL1P3A0A0U1RQE8 302 aa16.02■□□□□ 0.16
COL9A3-208ENST00000469802 CCDC66A2RUB6 948 aa16.02■□□□□ 0.16
COL9A3-208ENST00000469802 PDZK1P1A8MUH7 402 aa16.02■□□□□ 0.16
COL9A3-208ENST00000469802 KCNJ13O60928 360 aa16.02■□□□□ 0.16
COL9A3-208ENST00000469802 VIPP01282 170 aa16.02■□□□□ 0.16
COL9A3-208ENST00000469802 IDSP22304 550 aa16.02■□□□□ 0.16
COL9A3-208ENST00000469802 TNNT3P45378 269 aaPredicted RBP16.02■□□□□ 0.16
COL9A3-208ENST00000469802 CAPZBP47756 277 aa16.02■□□□□ 0.16
COL9A3-208ENST00000469802 PPM1FP49593 454 aaPredicted RBP16.02■□□□□ 0.16
COL9A3-208ENST00000469802 CTSCP53634 463 aa16.02■□□□□ 0.16
COL9A3-208ENST00000469802 GEMP55040 296 aa16.02■□□□□ 0.16
COL9A3-208ENST00000469802 GTF2H3Q13889 308 aa16.02■□□□□ 0.16
COL9A3-208ENST00000469802 SEPT7Q16181 437 aaKnown RBP16.02■□□□□ 0.16
COL9A3-208ENST00000469802 LDLRAP1Q5SW96 308 aa16.02■□□□□ 0.16
COL9A3-208ENST00000469802 ITPRIPL1Q6GPH6 555 aa16.02■□□□□ 0.16
COL9A3-208ENST00000469802 RAD9BQ6WBX8 426 aa16.02■□□□□ 0.16
COL9A3-208ENST00000469802 CDKL3Q8IVW4 592 aaPredicted RBP16.02■□□□□ 0.16
COL9A3-208ENST00000469802 TRIM48Q8IWZ4 208 aa16.02■□□□□ 0.16
COL9A3-208ENST00000469802 RASGEF1AQ8N9B8 481 aa16.02■□□□□ 0.16
COL9A3-208ENST00000469802 ALG3Q92685 438 aa16.02■□□□□ 0.16
COL9A3-208ENST00000469802 EXTL1Q92935 676 aa16.02■□□□□ 0.16
COL9A3-208ENST00000469802 ZPBPQ9BS86 351 aa16.02■□□□□ 0.16
COL9A3-208ENST00000469802 SLC12A9Q9BXP2 914 aa16.02■□□□□ 0.16
COL9A3-208ENST00000469802 OSBPL8Q9BZF1 889 aa16.02■□□□□ 0.16
COL9A3-208ENST00000469802 ZCCHC2Q9C0B9 1178 aaKnown RBP16.02■□□□□ 0.16
COL9A3-208ENST00000469802 LACRTQ9GZZ8 138 aa16.02■□□□□ 0.16
COL9A3-208ENST00000469802 APMAPQ9HDC9 416 aa16.02■□□□□ 0.16
COL9A3-208ENST00000469802 SLC40A1Q9NP59 571 aa16.02■□□□□ 0.16
COL9A3-208ENST00000469802 TMEM184BQ9Y519 407 aaPredicted RBP16.02■□□□□ 0.16
COL9A3-208ENST00000469802 PIKFYVEQ9Y2I7 2098 aa16.02■□□□□ 0.15
COL9A3-208ENST00000469802 OR52A4PA6NMU1 304 aa16.01■□□□□ 0.15
COL9A3-208ENST00000469802 B8ZZF3 427 aa16.01■□□□□ 0.15
COL9A3-208ENST00000469802 H7C0C1 242 aa16.01■□□□□ 0.15
COL9A3-208ENST00000469802 TOX3O15405 576 aaPredicted RBP16.01■□□□□ 0.15
COL9A3-208ENST00000469802 BUD23O43709 281 aaKnown RBP16.01■□□□□ 0.15
COL9A3-208ENST00000469802 RAD1O60671 282 aa16.01■□□□□ 0.15
COL9A3-208ENST00000469802 ANXA9O76027 345 aa16.01■□□□□ 0.15
COL9A3-208ENST00000469802 UBXN7O94888 489 aa16.01■□□□□ 0.15
COL9A3-208ENST00000469802 AGTP01019 485 aa16.01■□□□□ 0.15
COL9A3-208ENST00000469802 LIFP15018 202 aa16.01■□□□□ 0.15
COL9A3-208ENST00000469802 VCLP18206 1134 aa16.01■□□□□ 0.15
COL9A3-208ENST00000469802 RPL10P27635 214 aaKnown RBP16.01■□□□□ 0.15
COL9A3-208ENST00000469802 ATP5OP48047 213 aa16.01■□□□□ 0.15
COL9A3-208ENST00000469802 DRG2P55039 364 aaKnown RBP16.01■□□□□ 0.15
COL9A3-208ENST00000469802 MSLNQ13421 630 aaPredicted RBP16.01■□□□□ 0.15
COL9A3-208ENST00000469802 ITGA9Q13797 1035 aa16.01■□□□□ 0.15
COL9A3-208ENST00000469802 GPR18Q14330 331 aa16.01■□□□□ 0.15
COL9A3-208ENST00000469802 GPRC6AQ5T6X5 926 aa16.01■□□□□ 0.15
COL9A3-208ENST00000469802 CEACAM20Q6UY09 585 aa16.01■□□□□ 0.15
COL9A3-208ENST00000469802 RANBP10Q6VN20 620 aa16.01■□□□□ 0.15
COL9A3-208ENST00000469802 RBM12BQ8IXT5 1001 aaKnown RBP16.01■□□□□ 0.15
COL9A3-208ENST00000469802 KLHDC8BQ8IXV7 354 aa16.01■□□□□ 0.15
COL9A3-208ENST00000469802 CACNA2D3Q8IZS8 1091 aa16.01■□□□□ 0.15
COL9A3-208ENST00000469802 ZSCAN1Q8NBB4 408 aa16.01■□□□□ 0.15
COL9A3-208ENST00000469802 GDAP1Q8TB36 358 aa16.01■□□□□ 0.15
COL9A3-208ENST00000469802 RSC1A1Q92681 617 aa16.01■□□□□ 0.15
COL9A3-208ENST00000469802 C9orf72Q96LT7 481 aa16.01■□□□□ 0.15
COL9A3-208ENST00000469802 CTRCQ99895 268 aa16.01■□□□□ 0.15
COL9A3-208ENST00000469802 FICDQ9BVA6 458 aa16.01■□□□□ 0.15
COL9A3-208ENST00000469802 RBSNQ9H1K0 784 aa16.01■□□□□ 0.15
COL9A3-208ENST00000469802 KLHL3Q9UH77 587 aa16.01■□□□□ 0.15
COL9A3-208ENST00000469802 WDR37Q9Y2I8 494 aa16.01■□□□□ 0.15
COL9A3-208ENST00000469802 PKP3Q9Y446 797 aa16.01■□□□□ 0.15
COL9A3-208ENST00000469802 GRID2IPA4D2P6 1211 aa16■□□□□ 0.15
COL9A3-208ENST00000469802 UGT1A9O60656 530 aa16■□□□□ 0.15
COL9A3-208ENST00000469802 PRAMEF1O95521 474 aa16■□□□□ 0.15
COL9A3-208ENST00000469802 DLGAP3O95886 979 aa16■□□□□ 0.15
COL9A3-208ENST00000469802 RBP3P10745 1247 aa16■□□□□ 0.15
COL9A3-208ENST00000469802 UGT1A6P19224 532 aa16■□□□□ 0.15
COL9A3-208ENST00000469802 UGT1A1P22309 533 aa16■□□□□ 0.15
COL9A3-208ENST00000469802 UGT1A4P22310 534 aa16■□□□□ 0.15
COL9A3-208ENST00000469802 PSMB4P28070 264 aa16■□□□□ 0.15
COL9A3-208ENST00000469802 VAV2P52735 878 aa16■□□□□ 0.15
COL9A3-208ENST00000469802 CYP4F2P78329 520 aa16■□□□□ 0.15
COL9A3-208ENST00000469802 PTPRCAPQ14761 206 aa16■□□□□ 0.15
COL9A3-208ENST00000469802 CLCA4Q14CN2 919 aa16■□□□□ 0.15
COL9A3-208ENST00000469802 TAF1AQ15573 450 aaPredicted RBP16■□□□□ 0.15
COL9A3-208ENST00000469802 ANKRD20A2Q5SQ80 823 aa16■□□□□ 0.15
COL9A3-208ENST00000469802 CCDC181Q5TID7 509 aa16■□□□□ 0.15
COL9A3-208ENST00000469802 ANKRD20A1Q5TYW2 823 aa16■□□□□ 0.15
COL9A3-208ENST00000469802 ANKRD20A3Q5VUR7 823 aa16■□□□□ 0.15
COL9A3-208ENST00000469802 FAM83HQ6ZRV2 1179 aaPredicted RBP16■□□□□ 0.15
COL9A3-208ENST00000469802 TIPARPQ7Z3E1 657 aaKnown RBP16■□□□□ 0.15
COL9A3-208ENST00000469802 PRSS42Q7Z5A4 293 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms