RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 CNTFP26441 200 aa17.48■□□□□ 0.39
MRPL28-208ENST00000469744 HTR1BP28222 390 aa17.48■□□□□ 0.39
MRPL28-208ENST00000469744 SRP54P61011 504 aaKnown RBP17.48■□□□□ 0.39
MRPL28-208ENST00000469744 FRG1Q14331 258 aaKnown RBP17.48■□□□□ 0.39
MRPL28-208ENST00000469744 ARMC12Q5T9G4 340 aa17.48■□□□□ 0.39
MRPL28-208ENST00000469744 TIGD7Q6NT04 549 aaPredicted RBP17.48■□□□□ 0.39
MRPL28-208ENST00000469744 CRTC1Q6UUV9 634 aa17.48■□□□□ 0.39
MRPL28-208ENST00000469744 HSD11B1LQ7Z5J1 315 aa17.48■□□□□ 0.39
MRPL28-208ENST00000469744 KLHDC8BQ8IXV7 354 aa17.48■□□□□ 0.39
MRPL28-208ENST00000469744 SPOCK2Q92563 424 aa17.48■□□□□ 0.39
MRPL28-208ENST00000469744 NUS1Q96E22 293 aa17.48■□□□□ 0.39
MRPL28-208ENST00000469744 STAMBPL1Q96FJ0 436 aa17.48■□□□□ 0.39
MRPL28-208ENST00000469744 COQ10AQ96MF6 247 aa17.48■□□□□ 0.39
MRPL28-208ENST00000469744 WDR92Q96MX6 357 aa17.48■□□□□ 0.39
MRPL28-208ENST00000469744 ELAC2Q9BQ52 826 aaKnown RBP17.48■□□□□ 0.39
MRPL28-208ENST00000469744 POLR1EQ9GZS1 481 aaKnown RBP17.48■□□□□ 0.39
MRPL28-208ENST00000469744 RBM22Q9NW64 420 aaKnown RBP eCLIP17.48■□□□□ 0.39
MRPL28-208ENST00000469744 MKS1Q9NXB0 559 aa17.48■□□□□ 0.39
MRPL28-208ENST00000469744 MOCS1Q9NZB8 636 aa17.48■□□□□ 0.39
MRPL28-208ENST00000469744 PHTF1Q9UMS5 762 aa17.48■□□□□ 0.39
MRPL28-208ENST00000469744 CLCA2Q9UQC9 943 aa17.48■□□□□ 0.39
MRPL28-208ENST00000469744 FAM208BQ5VWN6 2430 aa17.47■□□□□ 0.39
MRPL28-208ENST00000469744 TMEM202A6NGA9 273 aa17.47■□□□□ 0.39
MRPL28-208ENST00000469744 CCT8L1PA6NM43 557 aa17.47■□□□□ 0.39
MRPL28-208ENST00000469744 LMO7DNF2Z398 122 aa17.47■□□□□ 0.39
MRPL28-208ENST00000469744 YY2O15391 372 aa17.47■□□□□ 0.39
MRPL28-208ENST00000469744 RASGRP1O95267 797 aa17.47■□□□□ 0.39
MRPL28-208ENST00000469744 HLA-DQB2P05538 268 aa17.47■□□□□ 0.39
MRPL28-208ENST00000469744 SNRPAP09012 282 aaKnown RBP17.47■□□□□ 0.39
MRPL28-208ENST00000469744 CTSEP14091 401 aa17.47■□□□□ 0.39
MRPL28-208ENST00000469744 CCNB1P14635 433 aa17.47■□□□□ 0.39
MRPL28-208ENST00000469744 CCNCP24863 283 aa17.47■□□□□ 0.39
MRPL28-208ENST00000469744 RPA3P35244 121 aaPredicted RBP17.47■□□□□ 0.39
MRPL28-208ENST00000469744 ETV3P41162 512 aa17.47■□□□□ 0.39
MRPL28-208ENST00000469744 RALGPS1Q5JS13 557 aa17.47■□□□□ 0.39
MRPL28-208ENST00000469744 HHATQ5VTY9 493 aa17.47■□□□□ 0.39
MRPL28-208ENST00000469744 SH2D5Q6ZV89 423 aa17.47■□□□□ 0.39
MRPL28-208ENST00000469744 PID1Q7Z2X4 250 aa17.47■□□□□ 0.39
MRPL28-208ENST00000469744 SLC35F3Q8IY50 421 aa17.47■□□□□ 0.39
MRPL28-208ENST00000469744 C4orf33Q8N1A6 199 aa17.47■□□□□ 0.39
MRPL28-208ENST00000469744 GDAP1Q8TB36 358 aa17.47■□□□□ 0.39
MRPL28-208ENST00000469744 OR1E3Q8WZA6 343 aa17.47■□□□□ 0.39
MRPL28-208ENST00000469744 LGR4Q9BXB1 951 aa17.47■□□□□ 0.39
MRPL28-208ENST00000469744 FGF22Q9HCT0 170 aa17.47■□□□□ 0.39
MRPL28-208ENST00000469744 MRPL40Q9NQ50 206 aaKnown RBP17.47■□□□□ 0.39
MRPL28-208ENST00000469744 SIRPGQ9P1W8 387 aa17.47■□□□□ 0.39
MRPL28-208ENST00000469744 KLHL8Q9P2G9 620 aaPredicted RBP17.47■□□□□ 0.39
MRPL28-208ENST00000469744 URB1O60287 2271 aaKnown RBP17.47■□□□□ 0.39
MRPL28-208ENST00000469744 KCNK1O00180 336 aa17.46■□□□□ 0.39
MRPL28-208ENST00000469744 TPP1O14773 563 aa17.46■□□□□ 0.39
MRPL28-208ENST00000469744 CASC3O15234 703 aaKnown RBP17.46■□□□□ 0.39
MRPL28-208ENST00000469744 AP2A1O95782 977 aa17.46■□□□□ 0.39
MRPL28-208ENST00000469744 MT-CO3P00414 261 aa17.46■□□□□ 0.39
MRPL28-208ENST00000469744 PSMB4P28070 264 aa17.46■□□□□ 0.39
MRPL28-208ENST00000469744 FOXN2P32314 431 aa17.46■□□□□ 0.39
MRPL28-208ENST00000469744 BLKP51451 505 aa17.46■□□□□ 0.39
MRPL28-208ENST00000469744 DUSP3P51452 185 aaPredicted RBP17.46■□□□□ 0.39
MRPL28-208ENST00000469744 E2F1Q01094 437 aa17.46■□□□□ 0.39
MRPL28-208ENST00000469744 NIPAL4Q0D2K0 466 aa17.46■□□□□ 0.39
MRPL28-208ENST00000469744 NR0B2Q15466 257 aa17.46■□□□□ 0.39
MRPL28-208ENST00000469744 TEX44Q53QW1 395 aa17.46■□□□□ 0.39
MRPL28-208ENST00000469744 PNCKQ6P2M8 343 aa17.46■□□□□ 0.39
MRPL28-208ENST00000469744 RFLNAQ6ZTI6 216 aa17.46■□□□□ 0.39
MRPL28-208ENST00000469744 USP45Q70EL2 814 aa17.46■□□□□ 0.39
MRPL28-208ENST00000469744 EFL1Q7Z2Z2 1120 aaKnown RBP17.46■□□□□ 0.39
MRPL28-208ENST00000469744 PIH1D2Q8WWB5 315 aa17.46■□□□□ 0.39
MRPL28-208ENST00000469744 MRRFQ96E11 262 aaKnown RBP17.46■□□□□ 0.39
MRPL28-208ENST00000469744 SCRN2Q96FV2 425 aa17.46■□□□□ 0.39
MRPL28-208ENST00000469744 APOPT1Q96IL0 206 aa17.46■□□□□ 0.39
MRPL28-208ENST00000469744 TBATAQ96M53 351 aa17.46■□□□□ 0.39
MRPL28-208ENST00000469744 PPP1R2P1Q96PQ5 205 aa17.46■□□□□ 0.39
MRPL28-208ENST00000469744 BOCQ9BWV1 1114 aa17.46■□□□□ 0.39
MRPL28-208ENST00000469744 CEP41Q9BYV8 373 aa17.46■□□□□ 0.39
MRPL28-208ENST00000469744 GBA3Q9H227 469 aa17.46■□□□□ 0.39
MRPL28-208ENST00000469744 VPS11Q9H270 941 aa17.46■□□□□ 0.39
MRPL28-208ENST00000469744 WDR26Q9H7D7 661 aa17.46■□□□□ 0.39
MRPL28-208ENST00000469744 SUDS3Q9H7L9 328 aaPredicted RBP17.46■□□□□ 0.39
MRPL28-208ENST00000469744 DOLKQ9UPQ8 538 aa17.46■□□□□ 0.39
MRPL28-208ENST00000469744 CHKBQ9Y259 395 aa17.46■□□□□ 0.39
MRPL28-208ENST00000469744 A0A1W2PQ67 120 aa17.45■□□□□ 0.38
MRPL28-208ENST00000469744 CACNB4O00305 520 aaPredicted RBP17.45■□□□□ 0.38
MRPL28-208ENST00000469744 KRT38O76015 456 aa17.45■□□□□ 0.38
MRPL28-208ENST00000469744 CYP2A6P11509 494 aaPredicted RBP17.45■□□□□ 0.38
MRPL28-208ENST00000469744 PGAM1P18669 254 aa17.45■□□□□ 0.38
MRPL28-208ENST00000469744 CCNFP41002 786 aa17.45■□□□□ 0.38
MRPL28-208ENST00000469744 KIAA1024LP59773 190 aa17.45■□□□□ 0.38
MRPL28-208ENST00000469744 ELOCQ15369 112 aa17.45■□□□□ 0.38
MRPL28-208ENST00000469744 SLC1A5Q15758 541 aa17.45■□□□□ 0.38
MRPL28-208ENST00000469744 SEPT7Q16181 437 aaKnown RBP17.45■□□□□ 0.38
MRPL28-208ENST00000469744 PERM1Q5SV97 790 aa17.45■□□□□ 0.38
MRPL28-208ENST00000469744 C6orf132Q5T0Z8 1188 aa17.45■□□□□ 0.38
MRPL28-208ENST00000469744 ALG1LQ6GMV1 187 aa17.45■□□□□ 0.38
MRPL28-208ENST00000469744 ESRP1Q6NXG1 681 aaKnown RBP17.45■□□□□ 0.38
MRPL28-208ENST00000469744 TIFABQ6ZNK6 161 aa17.45■□□□□ 0.38
MRPL28-208ENST00000469744 Q6ZVL8 140 aa17.45■□□□□ 0.38
MRPL28-208ENST00000469744 MARK2Q7KZI7 788 aaKnown RBP17.45■□□□□ 0.38
MRPL28-208ENST00000469744 PPM1NQ8N819 430 aa17.45■□□□□ 0.38
MRPL28-208ENST00000469744 DCBLD1Q8N8Z6 715 aa17.45■□□□□ 0.38
MRPL28-208ENST00000469744 OR56A4Q8NGH8 313 aa17.45■□□□□ 0.38
MRPL28-208ENST00000469744 ARRDC2Q8TBH0 407 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms