RNA–Protein interactions for RNA: ENST00000469054.1

VPS13D-204, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-204ENST00000469054 FAM169AQ9Y6X4 670 aa11.78□□□□□ -0.52
VPS13D-204ENST00000469054 FRYLO94915 3013 aa11.78□□□□□ -0.52
VPS13D-204ENST00000469054 GOLGA8KD6RF30 607 aa11.77□□□□□ -0.53
VPS13D-204ENST00000469054 E7ESA3 106 aa11.77□□□□□ -0.53
VPS13D-204ENST00000469054 GOLGA8TH3BQL2 631 aa11.77□□□□□ -0.53
VPS13D-204ENST00000469054 SGTAO43765 313 aa11.77□□□□□ -0.53
VPS13D-204ENST00000469054 KCNJ13O60928 360 aa11.77□□□□□ -0.53
VPS13D-204ENST00000469054 POLBP06746 335 aa11.77□□□□□ -0.53
VPS13D-204ENST00000469054 CKMT2P17540 419 aa11.77□□□□□ -0.53
VPS13D-204ENST00000469054 ELK3P41970 407 aa11.77□□□□□ -0.53
VPS13D-204ENST00000469054 NSG1P42857 185 aa11.77□□□□□ -0.53
VPS13D-204ENST00000469054 CLCNKAP51800 687 aa11.77□□□□□ -0.53
VPS13D-204ENST00000469054 PLTPP55058 493 aa11.77□□□□□ -0.53
VPS13D-204ENST00000469054 GUCY2DQ02846 1103 aa11.77□□□□□ -0.53
VPS13D-204ENST00000469054 CAV1Q03135 178 aa11.77□□□□□ -0.53
VPS13D-204ENST00000469054 PDIA2Q13087 525 aaKnown RBP11.77□□□□□ -0.53
VPS13D-204ENST00000469054 SEMA3AQ14563 771 aa11.77□□□□□ -0.53
VPS13D-204ENST00000469054 INSCQ1MX18 579 aa11.77□□□□□ -0.53
VPS13D-204ENST00000469054 PLA2G4EQ3MJ16 856 aa11.77□□□□□ -0.53
VPS13D-204ENST00000469054 BCL7AQ4VC05 210 aa11.77□□□□□ -0.53
VPS13D-204ENST00000469054 MRNIPQ6NTE8 343 aa11.77□□□□□ -0.53
VPS13D-204ENST00000469054 NEPROQ6NW34 567 aa11.77□□□□□ -0.53
VPS13D-204ENST00000469054 OGFOD3Q6PK18 319 aa11.77□□□□□ -0.53
VPS13D-204ENST00000469054 PACS1Q6VY07 963 aa11.77□□□□□ -0.53
VPS13D-204ENST00000469054 LDB1Q86U70 411 aaPredicted RBP11.77□□□□□ -0.53
VPS13D-204ENST00000469054 IGDCC3Q8IVU1 814 aa11.77□□□□□ -0.53
VPS13D-204ENST00000469054 NAT14Q8WUY8 206 aa11.77□□□□□ -0.53
VPS13D-204ENST00000469054 GLMNQ92990 594 aa11.77□□□□□ -0.53
VPS13D-204ENST00000469054 LINC00615Q96LM1 132 aaPredicted RBP11.77□□□□□ -0.53
VPS13D-204ENST00000469054 KLC4Q9NSK0 619 aa11.77□□□□□ -0.53
VPS13D-204ENST00000469054 NCKIPSDQ9NZQ3 722 aa11.77□□□□□ -0.53
VPS13D-204ENST00000469054 MARCH4Q9P2E8 410 aaPredicted RBP11.77□□□□□ -0.53
VPS13D-204ENST00000469054 DMGDHQ9UI17 866 aaKnown RBP11.77□□□□□ -0.53
VPS13D-204ENST00000469054 KCNK6Q9Y257 313 aa11.77□□□□□ -0.53
VPS13D-204ENST00000469054 TEX264Q9Y6I9 313 aa11.77□□□□□ -0.53
VPS13D-204ENST00000469054 TMEM131Q92545 1883 aa11.76□□□□□ -0.53
VPS13D-204ENST00000469054 ZNF292O60281 2723 aa11.76□□□□□ -0.53
VPS13D-204ENST00000469054 LY6G6EA0A0G2JKS1 128 aa11.76□□□□□ -0.53
VPS13D-204ENST00000469054 SPAARA0A1B0GVQ0 90 aa11.76□□□□□ -0.53
VPS13D-204ENST00000469054 ESYT3A0FGR9 886 aa11.76□□□□□ -0.53
VPS13D-204ENST00000469054 BHMG1C9JSJ3 638 aaPredicted RBP11.76□□□□□ -0.53
VPS13D-204ENST00000469054 QSOX1O00391 747 aa11.76□□□□□ -0.53
VPS13D-204ENST00000469054 OR1I1O60431 355 aa11.76□□□□□ -0.53
VPS13D-204ENST00000469054 AP2A2O94973 939 aa11.76□□□□□ -0.53
VPS13D-204ENST00000469054 CKMT1AP12532 417 aa11.76□□□□□ -0.53
VPS13D-204ENST00000469054 MYF5P13349 255 aa11.76□□□□□ -0.53
VPS13D-204ENST00000469054 VCLP18206 1134 aa11.76□□□□□ -0.53
VPS13D-204ENST00000469054 PMLP29590 882 aa11.76□□□□□ -0.53
VPS13D-204ENST00000469054 RPIAP49247 311 aa11.76□□□□□ -0.53
VPS13D-204ENST00000469054 TTPAP49638 278 aa11.76□□□□□ -0.53
VPS13D-204ENST00000469054 PRLHRP49683 370 aa11.76□□□□□ -0.53
VPS13D-204ENST00000469054 DUSP3P51452 185 aaPredicted RBP11.76□□□□□ -0.53
VPS13D-204ENST00000469054 SIM1P81133 766 aaPredicted RBP11.76□□□□□ -0.53
VPS13D-204ENST00000469054 DAB2P98082 770 aa11.76□□□□□ -0.53
VPS13D-204ENST00000469054 DNAJC3Q13217 504 aa11.76□□□□□ -0.53
VPS13D-204ENST00000469054 CRYMQ14894 314 aa11.76□□□□□ -0.53
VPS13D-204ENST00000469054 NR0B2Q15466 257 aa11.76□□□□□ -0.53
VPS13D-204ENST00000469054 LONRF1Q17RB8 773 aa11.76□□□□□ -0.53
VPS13D-204ENST00000469054 SPANXN3Q5MJ09 141 aa11.76□□□□□ -0.53
VPS13D-204ENST00000469054 HP1BP3Q5SSJ5 553 aaPredicted RBP11.76□□□□□ -0.53
VPS13D-204ENST00000469054 ZDHHC24Q6UX98 284 aa11.76□□□□□ -0.53
VPS13D-204ENST00000469054 CENPUQ71F23 418 aa11.76□□□□□ -0.53
VPS13D-204ENST00000469054 SDCCAG8Q86SQ7 713 aaPredicted RBP11.76□□□□□ -0.53
VPS13D-204ENST00000469054 AMZ2Q86W34 360 aa11.76□□□□□ -0.53
VPS13D-204ENST00000469054 SLC35F3Q8IY50 421 aa11.76□□□□□ -0.53
VPS13D-204ENST00000469054 CLDN19Q8N6F1 224 aa11.76□□□□□ -0.53
VPS13D-204ENST00000469054 OTUD6BQ8N6M0 293 aa11.76□□□□□ -0.53
VPS13D-204ENST00000469054 BEND7Q8N7W2 519 aaPredicted RBP11.76□□□□□ -0.53
VPS13D-204ENST00000469054 ARL10Q8N8L6 244 aa11.76□□□□□ -0.53
VPS13D-204ENST00000469054 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.76□□□□□ -0.53
VPS13D-204ENST00000469054 GPR156Q8NFN8 814 aa11.76□□□□□ -0.53
VPS13D-204ENST00000469054 GPR150Q8NGU9 434 aa11.76□□□□□ -0.53
VPS13D-204ENST00000469054 FBXO25Q8TCJ0 367 aa11.76□□□□□ -0.53
VPS13D-204ENST00000469054 ZDHHC1Q8WTX9 485 aa11.76□□□□□ -0.53
VPS13D-204ENST00000469054 WDR83Q9BRX9 315 aaKnown RBP11.76□□□□□ -0.53
VPS13D-204ENST00000469054 EPB41L5Q9HCM4 733 aa11.76□□□□□ -0.53
VPS13D-204ENST00000469054 C20orf96Q9NUD7 363 aaPredicted RBP11.76□□□□□ -0.53
VPS13D-204ENST00000469054 EVA1BQ9NVM1 165 aa11.76□□□□□ -0.53
VPS13D-204ENST00000469054 IL1RAPL1Q9NZN1 696 aa11.76□□□□□ -0.53
VPS13D-204ENST00000469054 SIRPGQ9P1W8 387 aa11.76□□□□□ -0.53
VPS13D-204ENST00000469054 GULP1Q9UBP9 304 aa11.76□□□□□ -0.53
VPS13D-204ENST00000469054 TBC1D29Q9UFV1 150 aa11.76□□□□□ -0.53
VPS13D-204ENST00000469054 ZC3H7BQ9UGR2 993 aaKnown RBP11.76□□□□□ -0.53
VPS13D-204ENST00000469054 CHMP2BQ9UQN3 213 aa11.76□□□□□ -0.53
VPS13D-204ENST00000469054 DNAJC16Q9Y2G8 782 aa11.76□□□□□ -0.53
VPS13D-204ENST00000469054 PRSS21Q9Y6M0 314 aa11.76□□□□□ -0.53
VPS13D-204ENST00000469054 U3KQA8 63 aa11.76□□□□□ -0.53
VPS13D-204ENST00000469054 SCN8AQ9UQD0 1980 aa11.76□□□□□ -0.53
VPS13D-204ENST00000469054 CEP250Q9BV73 2442 aa11.75□□□□□ -0.53
VPS13D-204ENST00000469054 C17orf113A0A1B0GUU1 675 aa11.75□□□□□ -0.53
VPS13D-204ENST00000469054 EME2A4GXA9 379 aaPredicted RBP11.75□□□□□ -0.53
VPS13D-204ENST00000469054 KLHL33A6NCF5 533 aa11.75□□□□□ -0.53
VPS13D-204ENST00000469054 MGAT4DA6NG13 374 aa11.75□□□□□ -0.53
VPS13D-204ENST00000469054 PRR19A6NJB7 356 aa11.75□□□□□ -0.53
VPS13D-204ENST00000469054 B4DGG1 531 aa11.75□□□□□ -0.53
VPS13D-204ENST00000469054 PFDN6O15212 129 aa11.75□□□□□ -0.53
VPS13D-204ENST00000469054 EIF3HO15372 352 aaKnown RBP eCLIP11.75□□□□□ -0.533e-7■■■■■ 34.1
VPS13D-204ENST00000469054 NOBOXO60393 691 aa11.75□□□□□ -0.53
VPS13D-204ENST00000469054 SNX2O60749 519 aa11.75□□□□□ -0.53
VPS13D-204ENST00000469054 OGNP20774 298 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms