RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 ZNF776Q68DI1 518 aaPredicted RBP18.73■□□□□ 0.59
SMC4-209ENST00000468653 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.73■□□□□ 0.59
SMC4-209ENST00000468653 ZNF781Q8N8C0 355 aa18.73■□□□□ 0.59
SMC4-209ENST00000468653 DDHD1Q8NEL9 900 aa18.73■□□□□ 0.59
SMC4-209ENST00000468653 OR2T3Q8NH03 318 aa18.73■□□□□ 0.59
SMC4-209ENST00000468653 GLYATL1Q969I3 302 aa18.73■□□□□ 0.59
SMC4-209ENST00000468653 CNDP1Q96KN2 507 aa18.73■□□□□ 0.59
SMC4-209ENST00000468653 VPS35Q96QK1 796 aa18.73■□□□□ 0.59
SMC4-209ENST00000468653 KDM4CQ9H3R0 1056 aa18.73■□□□□ 0.59
SMC4-209ENST00000468653 KCTD5Q9NXV2 234 aa18.73■□□□□ 0.59
SMC4-209ENST00000468653 TSR3Q9UJK0 312 aaKnown RBP18.73■□□□□ 0.59
SMC4-209ENST00000468653 RAP2CQ9Y3L5 183 aa18.73■□□□□ 0.59
SMC4-209ENST00000468653 PLXNB3Q9ULL4 1909 aa18.73■□□□□ 0.59
SMC4-209ENST00000468653 ATXN2Q99700 1313 aaKnown RBP18.72■□□□□ 0.59
SMC4-209ENST00000468653 KLF8O95600 359 aaPredicted RBP18.72■□□□□ 0.59
SMC4-209ENST00000468653 ASGR2P07307 311 aa18.72■□□□□ 0.59
SMC4-209ENST00000468653 IMPDH1P20839 514 aa18.72■□□□□ 0.59
SMC4-209ENST00000468653 CCR10P46092 362 aa18.72■□□□□ 0.59
SMC4-209ENST00000468653 CCDC15Q0P6D6 951 aa18.72■□□□□ 0.59
SMC4-209ENST00000468653 PRKAA1Q13131 559 aa18.72■□□□□ 0.59
SMC4-209ENST00000468653 PFKFB4Q16877 469 aa18.72■□□□□ 0.59
SMC4-209ENST00000468653 ZNF765Q7L2R6 523 aa18.72■□□□□ 0.59
SMC4-209ENST00000468653 MYO1HQ8N1T3 1032 aa18.72■□□□□ 0.59
SMC4-209ENST00000468653 HDDC3Q8N4P3 179 aa18.72■□□□□ 0.59
SMC4-209ENST00000468653 AADATQ8N5Z0 425 aa18.72■□□□□ 0.59
SMC4-209ENST00000468653 PTGR2Q8N8N7 351 aaPredicted RBP18.72■□□□□ 0.59
SMC4-209ENST00000468653 IL17RCQ8NAC3 791 aa18.72■□□□□ 0.59
SMC4-209ENST00000468653 FUBP1Q96AE4 644 aaKnown RBP18.72■□□□□ 0.59
SMC4-209ENST00000468653 LRRC37BQ96QE4 947 aa18.72■□□□□ 0.59
SMC4-209ENST00000468653 GABRG3Q99928 467 aa18.72■□□□□ 0.59
SMC4-209ENST00000468653 LATS2Q9NRM7 1088 aa18.72■□□□□ 0.59
SMC4-209ENST00000468653 PLXNA2O75051 1894 aa18.72■□□□□ 0.59
SMC4-209ENST00000468653 F5P12259 2224 aa18.72■□□□□ 0.59
SMC4-209ENST00000468653 SNUPNO95149 360 aaKnown RBP18.71■□□□□ 0.59
SMC4-209ENST00000468653 MTHFD2P13995 350 aa18.71■□□□□ 0.59
SMC4-209ENST00000468653 ZBTB16Q05516 673 aa18.71■□□□□ 0.59
SMC4-209ENST00000468653 CRY1Q16526 586 aa18.71■□□□□ 0.59
SMC4-209ENST00000468653 KIAA1211LQ6NV74 962 aa18.71■□□□□ 0.59
SMC4-209ENST00000468653 TRMT11Q7Z4G4 463 aaKnown RBP18.71■□□□□ 0.59
SMC4-209ENST00000468653 GPSM1Q86YR5 675 aa18.71■□□□□ 0.59
SMC4-209ENST00000468653 FBXO39Q8N4B4 442 aa18.71■□□□□ 0.59
SMC4-209ENST00000468653 AGR3Q8TD06 166 aa18.71■□□□□ 0.59
SMC4-209ENST00000468653 WWP1Q9H0M0 922 aa18.71■□□□□ 0.59
SMC4-209ENST00000468653 KLHL42Q9P2K6 505 aa18.71■□□□□ 0.59
SMC4-209ENST00000468653 HEY2Q9UBP5 337 aa18.71■□□□□ 0.59
SMC4-209ENST00000468653 INPP4BO15327 924 aa18.7■□□□□ 0.58
SMC4-209ENST00000468653 AP2A2O94973 939 aa18.7■□□□□ 0.58
SMC4-209ENST00000468653 HOXB2P14652 356 aa18.7■□□□□ 0.58
SMC4-209ENST00000468653 MPSTP25325 297 aa18.7■□□□□ 0.58
SMC4-209ENST00000468653 RPS14P62263 151 aaKnown RBP18.7■□□□□ 0.58
SMC4-209ENST00000468653 HERVK_113P63132 956 aa18.7■□□□□ 0.58
SMC4-209ENST00000468653 ACSBG2Q5FVE4 666 aa18.7■□□□□ 0.58
SMC4-209ENST00000468653 ZNF678Q5SXM1 525 aa18.7■□□□□ 0.58
SMC4-209ENST00000468653 ZNF648Q5T619 568 aaPredicted RBP18.7■□□□□ 0.58
SMC4-209ENST00000468653 RAET1GQ6H3X3 334 aa18.7■□□□□ 0.58
SMC4-209ENST00000468653 PHYKPLQ8IUZ5 450 aa18.7■□□□□ 0.58
SMC4-209ENST00000468653 LSMEM2Q8N112 164 aa18.7■□□□□ 0.58
SMC4-209ENST00000468653 FITM2Q8N6M3 262 aa18.7■□□□□ 0.58
SMC4-209ENST00000468653 GBP7Q8N8V2 638 aaPredicted RBP18.7■□□□□ 0.58
SMC4-209ENST00000468653 GANCQ8TET4 914 aa18.7■□□□□ 0.58
SMC4-209ENST00000468653 L3HYPDHQ96EM0 354 aa18.7■□□□□ 0.58
SMC4-209ENST00000468653 ERVK-6Q9BXR3 956 aa18.7■□□□□ 0.58
SMC4-209ENST00000468653 SHCBP1LQ9BZQ2 653 aa18.7■□□□□ 0.58
SMC4-209ENST00000468653 FBRSQ9HAH7 460 aa18.7■□□□□ 0.58
SMC4-209ENST00000468653 EML4Q9HC35 981 aaKnown RBP18.7■□□□□ 0.58
SMC4-209ENST00000468653 CKAP5Q14008 2032 aa18.7■□□□□ 0.58
SMC4-209ENST00000468653 A0A1W2PP55 124 aa18.7■□□□□ 0.58
SMC4-209ENST00000468653 TSPAN6O43657 245 aa18.7■□□□□ 0.58
SMC4-209ENST00000468653 SUPT7LO94864 414 aa18.7■□□□□ 0.58
SMC4-209ENST00000468653 PCDH8O95206 1070 aa18.7■□□□□ 0.58
SMC4-209ENST00000468653 CBSLP0DN79 551 aa18.7■□□□□ 0.58
SMC4-209ENST00000468653 CCR7P32248 378 aa18.7■□□□□ 0.58
SMC4-209ENST00000468653 CBSP35520 551 aa18.7■□□□□ 0.58
SMC4-209ENST00000468653 GPR1P46091 355 aa18.7■□□□□ 0.58
SMC4-209ENST00000468653 RPL14P50914 215 aaKnown RBP18.7■□□□□ 0.58
SMC4-209ENST00000468653 CREB5Q02930 508 aa18.7■□□□□ 0.58
SMC4-209ENST00000468653 KHDC1Q4VXA5 237 aaKnown RBP18.7■□□□□ 0.58
SMC4-209ENST00000468653 AGBL4Q5VU57 503 aa18.7■□□□□ 0.58
SMC4-209ENST00000468653 FRA10AC1Q70Z53 315 aa18.7■□□□□ 0.58
SMC4-209ENST00000468653 ADAMTSL2Q86TH1 951 aa18.7■□□□□ 0.58
SMC4-209ENST00000468653 HLA-CQ95604 372 aa18.7■□□□□ 0.58
SMC4-209ENST00000468653 RILPQ96NA2 401 aa18.7■□□□□ 0.58
SMC4-209ENST00000468653 CDX2Q99626 313 aaPredicted RBP18.7■□□□□ 0.58
SMC4-209ENST00000468653 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.7■□□□□ 0.58
SMC4-209ENST00000468653 ATG2BQ96BY7 2078 aa18.69■□□□□ 0.58
SMC4-209ENST00000468653 NCF1BA6NI72 391 aaPredicted RBP18.69■□□□□ 0.58
SMC4-209ENST00000468653 NCF1CA8MVU1 366 aaPredicted RBP18.69■□□□□ 0.58
SMC4-209ENST00000468653 AP1G1O43747 822 aa18.69■□□□□ 0.58
SMC4-209ENST00000468653 NARSO43776 548 aaKnown RBP18.69■□□□□ 0.58
SMC4-209ENST00000468653 SNX2O60749 519 aa18.69■□□□□ 0.58
SMC4-209ENST00000468653 RNASEH2AO75792 299 aaKnown RBP18.69■□□□□ 0.58
SMC4-209ENST00000468653 NCF1P14598 390 aaPredicted RBP18.69■□□□□ 0.58
SMC4-209ENST00000468653 GLULP15104 373 aa18.69■□□□□ 0.58
SMC4-209ENST00000468653 COPAP53621 1224 aa18.69■□□□□ 0.58
SMC4-209ENST00000468653 MRPS21P82921 87 aaKnown RBP18.69■□□□□ 0.58
SMC4-209ENST00000468653 DPTQ07507 201 aa18.69■□□□□ 0.58
SMC4-209ENST00000468653 MTDHQ86UE4 582 aaKnown RBP18.69■□□□□ 0.58
SMC4-209ENST00000468653 ERP27Q96DN0 273 aa18.69■□□□□ 0.58
SMC4-209ENST00000468653 CD274Q9NZQ7 290 aa18.69■□□□□ 0.58
SMC4-209ENST00000468653 MBD1Q9UIS9 605 aaPredicted RBP18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms