RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 TTC13Q8NBP0 860 aa18.79■□□□□ 0.6
COL7A1-207ENST00000467985 NCSTNQ92542 709 aa18.79■□□□□ 0.6
COL7A1-207ENST00000467985 SPATA13Q96N96 652 aa18.79■□□□□ 0.6
COL7A1-207ENST00000467985 FICDQ9BVA6 458 aa18.79■□□□□ 0.6
COL7A1-207ENST00000467985 DDA1Q9BW61 102 aa18.79■□□□□ 0.6
COL7A1-207ENST00000467985 C10orf88Q9H8K7 445 aa18.79■□□□□ 0.6
COL7A1-207ENST00000467985 WASH6PQ9NQA3 447 aa18.79■□□□□ 0.6
COL7A1-207ENST00000467985 SMOXQ9NWM0 555 aa18.79■□□□□ 0.6
COL7A1-207ENST00000467985 TMEM9Q9P0T7 183 aa18.79■□□□□ 0.6
COL7A1-207ENST00000467985 DNAJC16Q9Y2G8 782 aa18.79■□□□□ 0.6
COL7A1-207ENST00000467985 C5orf60A6NFR6 353 aa18.78■□□□□ 0.6
COL7A1-207ENST00000467985 PDZK1P1A8MUH7 402 aa18.78■□□□□ 0.6
COL7A1-207ENST00000467985 VIPP01282 170 aa18.78■□□□□ 0.6
COL7A1-207ENST00000467985 LPOP22079 712 aaPredicted RBP18.78■□□□□ 0.6
COL7A1-207ENST00000467985 MPSTP25325 297 aa18.78■□□□□ 0.6
COL7A1-207ENST00000467985 PDE1BQ01064 536 aa18.78■□□□□ 0.6
COL7A1-207ENST00000467985 TAF1AQ15573 450 aaPredicted RBP18.78■□□□□ 0.6
COL7A1-207ENST00000467985 TGIF1Q15583 401 aa18.78■□□□□ 0.6
COL7A1-207ENST00000467985 CHRNA6Q15825 494 aa18.78■□□□□ 0.6
COL7A1-207ENST00000467985 KHDC1Q4VXA5 237 aaKnown RBP18.78■□□□□ 0.6
COL7A1-207ENST00000467985 TAF1BQ53T94 588 aaPredicted RBP18.78■□□□□ 0.6
COL7A1-207ENST00000467985 ABRAXAS1Q6UWZ7 409 aa18.78■□□□□ 0.6
COL7A1-207ENST00000467985 RANBP10Q6VN20 620 aa18.78■□□□□ 0.6
COL7A1-207ENST00000467985 ARHGAP22Q7Z5H3 698 aa18.78■□□□□ 0.6
COL7A1-207ENST00000467985 ZFAND4Q86XD8 727 aa18.78■□□□□ 0.6
COL7A1-207ENST00000467985 DTX1Q86Y01 620 aa18.78■□□□□ 0.6
COL7A1-207ENST00000467985 PLXDC1Q8IUK5 500 aa18.78■□□□□ 0.6
COL7A1-207ENST00000467985 TMEM139Q8IV31 216 aa18.78■□□□□ 0.6
COL7A1-207ENST00000467985 LRRC8AQ8IWT6 810 aa18.78■□□□□ 0.6
COL7A1-207ENST00000467985 DDHD1Q8NEL9 900 aa18.78■□□□□ 0.6
COL7A1-207ENST00000467985 ZNF514Q96K75 400 aaPredicted RBP18.78■□□□□ 0.6
COL7A1-207ENST00000467985 SLC39A1Q9NY26 324 aa18.78■□□□□ 0.6
COL7A1-207ENST00000467985 DNMT3AQ9Y6K1 912 aaPredicted RBP18.78■□□□□ 0.6
COL7A1-207ENST00000467985 BOD1L1Q8NFC6 3051 aa18.77■□□□□ 0.6
COL7A1-207ENST00000467985 PSMB4P28070 264 aa18.77■□□□□ 0.6
COL7A1-207ENST00000467985 ADRA1AP35348 466 aa18.77■□□□□ 0.6
COL7A1-207ENST00000467985 MAPK9P45984 424 aa18.77■□□□□ 0.6
COL7A1-207ENST00000467985 C19orf57Q0VDD7 668 aa18.77■□□□□ 0.6
COL7A1-207ENST00000467985 MANEAQ5SRI9 462 aa18.77■□□□□ 0.6
COL7A1-207ENST00000467985 DCAF12Q5T6F0 453 aa18.77■□□□□ 0.6
COL7A1-207ENST00000467985 TMEM26Q6ZUK4 368 aa18.77■□□□□ 0.6
COL7A1-207ENST00000467985 C11orf96Q7Z7L8 435 aa18.77■□□□□ 0.6
COL7A1-207ENST00000467985 AMZ2Q86W34 360 aa18.77■□□□□ 0.6
COL7A1-207ENST00000467985 FAM129CQ86XR2 697 aa18.77■□□□□ 0.6
COL7A1-207ENST00000467985 ART4Q93070 314 aa18.77■□□□□ 0.6
COL7A1-207ENST00000467985 TEFMQ96QE5 360 aaKnown RBP18.77■□□□□ 0.6
COL7A1-207ENST00000467985 C19orf43Q9BQ61 176 aa18.77■□□□□ 0.6
COL7A1-207ENST00000467985 GORASP1Q9BQQ3 440 aa18.77■□□□□ 0.6
COL7A1-207ENST00000467985 POT1Q9NUX5 634 aa18.77■□□□□ 0.6
COL7A1-207ENST00000467985 FEZ2Q9UHY8 353 aaPredicted RBP18.77■□□□□ 0.6
COL7A1-207ENST00000467985 BUD23O43709 281 aaKnown RBP18.76■□□□□ 0.59
COL7A1-207ENST00000467985 UGT1A9O60656 530 aa18.76■□□□□ 0.59
COL7A1-207ENST00000467985 CRTAMO95727 393 aa18.76■□□□□ 0.59
COL7A1-207ENST00000467985 UGT1A6P19224 532 aa18.76■□□□□ 0.59
COL7A1-207ENST00000467985 UGT1A1P22309 533 aa18.76■□□□□ 0.59
COL7A1-207ENST00000467985 UGT1A4P22310 534 aa18.76■□□□□ 0.59
COL7A1-207ENST00000467985 UGT1A3P35503 534 aa18.76■□□□□ 0.59
COL7A1-207ENST00000467985 SLC19A1P41440 591 aa18.76■□□□□ 0.59
COL7A1-207ENST00000467985 HALP42357 657 aa18.76■□□□□ 0.59
COL7A1-207ENST00000467985 DMPKQ09013 629 aa18.76■□□□□ 0.59
COL7A1-207ENST00000467985 SEPT7Q16181 437 aaKnown RBP18.76■□□□□ 0.59
COL7A1-207ENST00000467985 SNAP47Q5SQN1 464 aa18.76■□□□□ 0.59
COL7A1-207ENST00000467985 GPRC6AQ5T6X5 926 aa18.76■□□□□ 0.59
COL7A1-207ENST00000467985 ZSCAN1Q8NBB4 408 aa18.76■□□□□ 0.59
COL7A1-207ENST00000467985 ZNF398Q8TD17 642 aa18.76■□□□□ 0.59
COL7A1-207ENST00000467985 UBE2Q2Q8WVN8 375 aa18.76■□□□□ 0.59
COL7A1-207ENST00000467985 FAM118BQ9BPY3 351 aa18.76■□□□□ 0.59
COL7A1-207ENST00000467985 ZPBPQ9BS86 351 aa18.76■□□□□ 0.59
COL7A1-207ENST00000467985 UGT1A7Q9HAW7 530 aa18.76■□□□□ 0.59
COL7A1-207ENST00000467985 UGT1A10Q9HAW8 530 aa18.76■□□□□ 0.59
COL7A1-207ENST00000467985 UGT1A8Q9HAW9 530 aa18.76■□□□□ 0.59
COL7A1-207ENST00000467985 SCHIP1Q9P0W5 487 aaPredicted RBP18.76■□□□□ 0.59
COL7A1-207ENST00000467985 ZNF624Q9P2J8 865 aaPredicted RBP18.76■□□□□ 0.59
COL7A1-207ENST00000467985 ARL5AQ9Y689 179 aa18.76■□□□□ 0.59
COL7A1-207ENST00000467985 ZNF462Q96JM2 2506 aa18.76■□□□□ 0.59
COL7A1-207ENST00000467985 KLHL33A6NCF5 533 aa18.75■□□□□ 0.59
COL7A1-207ENST00000467985 EFCAB7A8K855 629 aa18.75■□□□□ 0.59
COL7A1-207ENST00000467985 GAPDHSO14556 408 aaPredicted RBP18.75■□□□□ 0.59
COL7A1-207ENST00000467985 UBXN7O94888 489 aa18.75■□□□□ 0.59
COL7A1-207ENST00000467985 PRAMEF1O95521 474 aa18.75■□□□□ 0.59
COL7A1-207ENST00000467985 MSH3P20585 1137 aa18.75■□□□□ 0.59
COL7A1-207ENST00000467985 RPL10P27635 214 aaKnown RBP18.75■□□□□ 0.59
COL7A1-207ENST00000467985 ATP1A2P50993 1020 aa18.75■□□□□ 0.59
COL7A1-207ENST00000467985 LONRF2Q1L5Z9 754 aa18.75■□□□□ 0.59
COL7A1-207ENST00000467985 AADACL2Q6P093 401 aa18.75■□□□□ 0.59
COL7A1-207ENST00000467985 PCSK4Q6UW60 755 aa18.75■□□□□ 0.59
COL7A1-207ENST00000467985 ARHGEF18Q6ZSZ5 1173 aa18.75■□□□□ 0.59
COL7A1-207ENST00000467985 RNF10Q8N5U6 811 aaKnown RBP18.75■□□□□ 0.59
COL7A1-207ENST00000467985 RASGEF1AQ8N9B8 481 aa18.75■□□□□ 0.59
COL7A1-207ENST00000467985 CCDC110Q8TBZ0 833 aa18.75■□□□□ 0.59
COL7A1-207ENST00000467985 TTC9Q92623 222 aa18.75■□□□□ 0.59
COL7A1-207ENST00000467985 CXorf40BQ96DE9 158 aa18.75■□□□□ 0.59
COL7A1-207ENST00000467985 SGF29Q96ES7 293 aa18.75■□□□□ 0.59
COL7A1-207ENST00000467985 TBC1D10AQ9BXI6 508 aa18.75■□□□□ 0.59
COL7A1-207ENST00000467985 ARNT2Q9HBZ2 717 aa18.75■□□□□ 0.59
COL7A1-207ENST00000467985 SLC40A1Q9NP59 571 aa18.75■□□□□ 0.59
COL7A1-207ENST00000467985 FBXO8Q9NRD0 319 aa18.75■□□□□ 0.59
COL7A1-207ENST00000467985 OCIAD1Q9NX40 245 aa18.75■□□□□ 0.59
COL7A1-207ENST00000467985 MN1Q10571 1320 aaPredicted RBP18.74■□□□□ 0.59
COL7A1-207ENST00000467985 ZNF106Q9H2Y7 1883 aaKnown RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms