RNA–Protein interactions for RNA: ENST00000467435.1

HDLBP-231, Transcript of high density lipoprotein binding protein, human

TSL 2

Gene HDLBP, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-231	ENST00000467435	CXorf40A	Q8TE69	158 aa		12.14	□□□□□ -0.47
HDLBP-231	ENST00000467435	FUBP1	Q96AE4	644 aa	Known RBP	12.14	□□□□□ -0.47
HDLBP-231	ENST00000467435	RAB7B	Q96AH8	199 aa		12.14	□□□□□ -0.47
HDLBP-231	ENST00000467435	PDLIM5	Q96HC4	596 aa	Known RBP	12.14	□□□□□ -0.47
HDLBP-231	ENST00000467435	FAM161B	Q96MY7	647 aa		12.14	□□□□□ -0.47
HDLBP-231	ENST00000467435	ERVK-6	Q9BXR3	956 aa		12.14	□□□□□ -0.47
HDLBP-231	ENST00000467435	HDAC8	Q9BY41	377 aa		12.14	□□□□□ -0.47
HDLBP-231	ENST00000467435	SHCBP1L	Q9BZQ2	653 aa		12.14	□□□□□ -0.47
HDLBP-231	ENST00000467435	RSPH9	Q9H1X1	276 aa	Predicted RBP	12.14	□□□□□ -0.47
HDLBP-231	ENST00000467435	GSTO2	Q9H4Y5	243 aa		12.14	□□□□□ -0.47
HDLBP-231	ENST00000467435	EML4	Q9HC35	981 aa	Known RBP	12.14	□□□□□ -0.47
HDLBP-231	ENST00000467435	SPATS2L	Q9NUQ6	558 aa	Known RBP	12.14	□□□□□ -0.47
HDLBP-231	ENST00000467435	KCTD5	Q9NXV2	234 aa		12.14	□□□□□ -0.47
HDLBP-231	ENST00000467435	NUDT4	Q9NZJ9	180 aa		12.14	□□□□□ -0.47
HDLBP-231	ENST00000467435	COQ6	Q9Y2Z9	468 aa		12.14	□□□□□ -0.47
HDLBP-231	ENST00000467435	STX16-NPEPL1	H3BU86	382 aa		12.13	□□□□□ -0.47
HDLBP-231	ENST00000467435	FCHO1	O14526	889 aa		12.13	□□□□□ -0.47
HDLBP-231	ENST00000467435	ZNF195	O14628	629 aa		12.13	□□□□□ -0.47
HDLBP-231	ENST00000467435	STX16	O14662	325 aa		12.13	□□□□□ -0.47
HDLBP-231	ENST00000467435	MBTPS2	O43462	519 aa		12.13	□□□□□ -0.47
HDLBP-231	ENST00000467435	KLK8	O60259	260 aa		12.13	□□□□□ -0.47
HDLBP-231	ENST00000467435	LZTS3	O60299	673 aa	Predicted RBP	12.13	□□□□□ -0.47
HDLBP-231	ENST00000467435	SYNCRIP	O60506	623 aa	Known RBP	12.13	□□□□□ -0.47
HDLBP-231	ENST00000467435	SNX2	O60749	519 aa		12.13	□□□□□ -0.47
HDLBP-231	ENST00000467435	RNASEH1	O60930	286 aa	Known RBP	12.13	□□□□□ -0.47
HDLBP-231	ENST00000467435	MTX2	O75431	263 aa		12.13	□□□□□ -0.47
HDLBP-231	ENST00000467435	SUPT7L	O94864	414 aa		12.13	□□□□□ -0.47
HDLBP-231	ENST00000467435	AP2A2	O94973	939 aa		12.13	□□□□□ -0.47
HDLBP-231	ENST00000467435	ADH1B	P00325	375 aa		12.13	□□□□□ -0.47
HDLBP-231	ENST00000467435	KIR2DL1	P43626	348 aa	Predicted RBP	12.13	□□□□□ -0.47
HDLBP-231	ENST00000467435	CORO7	P57737	925 aa		12.13	□□□□□ -0.47
HDLBP-231	ENST00000467435	SATB1	Q01826	763 aa		12.13	□□□□□ -0.47
HDLBP-231	ENST00000467435	BNIP1	Q12981	228 aa		12.13	□□□□□ -0.47
HDLBP-231	ENST00000467435	PON2	Q15165	354 aa		12.13	□□□□□ -0.47
HDLBP-231	ENST00000467435	CST6	Q15828	149 aa		12.13	□□□□□ -0.47
HDLBP-231	ENST00000467435	CRY1	Q16526	586 aa		12.13	□□□□□ -0.47
HDLBP-231	ENST00000467435	PFKFB4	Q16877	469 aa		12.13	□□□□□ -0.47
HDLBP-231	ENST00000467435	UNC50	Q53HI1	259 aa		12.13	□□□□□ -0.47
HDLBP-231	ENST00000467435	ACSBG2	Q5FVE4	666 aa		12.13	□□□□□ -0.47
HDLBP-231	ENST00000467435	SPDYA	Q5MJ70	313 aa		12.13	□□□□□ -0.47
HDLBP-231	ENST00000467435	LDLRAP1	Q5SW96	308 aa		12.13	□□□□□ -0.47
HDLBP-231	ENST00000467435	PIP5KL1	Q5T9C9	394 aa		12.13	□□□□□ -0.47
HDLBP-231	ENST00000467435	SEL1L3	Q68CR1	1132 aa		12.13	□□□□□ -0.47
HDLBP-231	ENST00000467435	FRA10AC1	Q70Z53	315 aa		12.13	□□□□□ -0.47
HDLBP-231	ENST00000467435	RPS27L	Q71UM5	84 aa	Known RBP	12.13	□□□□□ -0.47
HDLBP-231	ENST00000467435	CLNK	Q7Z7G1	428 aa		12.13	□□□□□ -0.47
HDLBP-231	ENST00000467435	CUZD1	Q86UP6	607 aa		12.13	□□□□□ -0.47
HDLBP-231	ENST00000467435	BTN2A2	Q8WVV5	523 aa		12.13	□□□□□ -0.47
HDLBP-231	ENST00000467435	GLYATL1	Q969I3	302 aa		12.13	□□□□□ -0.47
HDLBP-231	ENST00000467435	PRR11	Q96HE9	360 aa	Predicted RBP	12.13	□□□□□ -0.47
HDLBP-231	ENST00000467435	RILP	Q96NA2	401 aa		12.13	□□□□□ -0.47
HDLBP-231	ENST00000467435	TRMO	Q9BU70	441 aa		12.13	□□□□□ -0.47
HDLBP-231	ENST00000467435	LATS2	Q9NRM7	1088 aa		12.13	□□□□□ -0.47
HDLBP-231	ENST00000467435	KLHL42	Q9P2K6	505 aa		12.13	□□□□□ -0.47
HDLBP-231	ENST00000467435	ZDHHC2	Q9UIJ5	367 aa		12.13	□□□□□ -0.47
HDLBP-231	ENST00000467435	APOBEC2	Q9Y235	224 aa	Known RBP	12.13	□□□□□ -0.47
HDLBP-231	ENST00000467435	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	12.13	□□□□□ -0.47
HDLBP-231	ENST00000467435	PIAS3	Q9Y6X2	628 aa		12.13	□□□□□ -0.47
HDLBP-231	ENST00000467435	NCF1B	A6NI72	391 aa	Predicted RBP	12.12	□□□□□ -0.47
HDLBP-231	ENST00000467435	NCF1C	A8MVU1	366 aa	Predicted RBP	12.12	□□□□□ -0.47
HDLBP-231	ENST00000467435	SLCO1B7	G3V0H7	640 aa		12.12	□□□□□ -0.47
HDLBP-231	ENST00000467435	MATN2	O00339	956 aa		12.12	□□□□□ -0.47
HDLBP-231	ENST00000467435	MID1	O15344	667 aa		12.12	□□□□□ -0.47
HDLBP-231	ENST00000467435	HDAC3	O15379	428 aa		12.12	□□□□□ -0.47
HDLBP-231	ENST00000467435	DIAPH2	O60879	1101 aa		12.12	□□□□□ -0.47
HDLBP-231	ENST00000467435	MMP20	O60882	483 aa		12.12	□□□□□ -0.47
HDLBP-231	ENST00000467435	RECQL5	O94762	991 aa	Predicted RBP	12.12	□□□□□ -0.47
HDLBP-231	ENST00000467435	SIX3	O95343	332 aa	Predicted RBP	12.12	□□□□□ -0.47
HDLBP-231	ENST00000467435	EGF	P01133	1207 aa		12.12	□□□□□ -0.47
HDLBP-231	ENST00000467435	S100B	P04271	92 aa	Predicted RBP	12.12	□□□□□ -0.47
HDLBP-231	ENST00000467435	RPS17	P08708	135 aa	Known RBP	12.12	□□□□□ -0.47
HDLBP-231	ENST00000467435	CBSL	P0DN79	551 aa		12.12	□□□□□ -0.47
HDLBP-231	ENST00000467435	NCF1	P14598	390 aa	Predicted RBP	12.12	□□□□□ -0.47
HDLBP-231	ENST00000467435	C5AR1	P21730	350 aa		12.12	□□□□□ -0.47
HDLBP-231	ENST00000467435	EEF1D	P29692	281 aa	Known RBP	12.12	□□□□□ -0.47
HDLBP-231	ENST00000467435	DRD3	P35462	400 aa		12.12	□□□□□ -0.47
HDLBP-231	ENST00000467435	CBS	P35520	551 aa		12.12	□□□□□ -0.47
HDLBP-231	ENST00000467435	IDH3A	P50213	366 aa		12.12	□□□□□ -0.47
HDLBP-231	ENST00000467435	HK3	P52790	923 aa		12.12	□□□□□ -0.47
HDLBP-231	ENST00000467435	GALNT1	Q10472	559 aa	Predicted RBP	12.12	□□□□□ -0.47
HDLBP-231	ENST00000467435	TUBB3	Q13509	450 aa		12.12	□□□□□ -0.47
HDLBP-231	ENST00000467435	STARD3	Q14849	445 aa		12.12	□□□□□ -0.47
HDLBP-231	ENST00000467435	KHDC1	Q4VXA5	237 aa	Known RBP	12.12	□□□□□ -0.47
HDLBP-231	ENST00000467435	SH2D4B	Q5SQS7	431 aa		12.12	□□□□□ -0.47
HDLBP-231	ENST00000467435	ZNF648	Q5T619	568 aa	Predicted RBP	12.12	□□□□□ -0.47
HDLBP-231	ENST00000467435	VWA5B1	Q5TIE3	1220 aa		12.12	□□□□□ -0.47
HDLBP-231	ENST00000467435	ZNF776	Q68DI1	518 aa	Predicted RBP	12.12	□□□□□ -0.47
HDLBP-231	ENST00000467435	SBSN	Q6UWP8	590 aa		12.12	□□□□□ -0.47
HDLBP-231	ENST00000467435	RALGPS2	Q86X27	583 aa	Predicted RBP	12.12	□□□□□ -0.47
HDLBP-231	ENST00000467435	GPSM1	Q86YR5	675 aa		12.12	□□□□□ -0.47
HDLBP-231	ENST00000467435	PHYKPL	Q8IUZ5	450 aa		12.12	□□□□□ -0.47
HDLBP-231	ENST00000467435	AFAP1L2	Q8N4X5	818 aa		12.12	□□□□□ -0.47
HDLBP-231	ENST00000467435	AADAT	Q8N5Z0	425 aa		12.12	□□□□□ -0.47
HDLBP-231	ENST00000467435	OR2T3	Q8NH03	318 aa		12.12	□□□□□ -0.47
HDLBP-231	ENST00000467435	DNASE1L2	Q92874	299 aa		12.12	□□□□□ -0.47
HDLBP-231	ENST00000467435	GABRG3	Q99928	467 aa		12.12	□□□□□ -0.47
HDLBP-231	ENST00000467435	FAM126A	Q9BYI3	521 aa	Predicted RBP	12.12	□□□□□ -0.47
HDLBP-231	ENST00000467435	NMUR2	Q9GZQ4	415 aa		12.12	□□□□□ -0.47
HDLBP-231	ENST00000467435	UBE2Z	Q9H832	354 aa	Predicted RBP	12.12	□□□□□ -0.47
HDLBP-231	ENST00000467435	COG4	Q9H9E3	785 aa		12.12	□□□□□ -0.47

Retrieved 100 of 20,778 RNA–protein pairs in 123.3 ms