RNA–Protein interactions for RNA: ENST00000466606.1

EDEM3-205, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, human

TSL 3

Gene EDEM3, Length 487 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EDEM3-205	ENST00000466606	DUSP19	Q8WTR2	217 aa		4.13	□□□□□ -1.75
EDEM3-205	ENST00000466606	IGSF8	Q969P0	613 aa		4.13	□□□□□ -1.75
EDEM3-205	ENST00000466606	GRAMD2B	Q96HH9	432 aa		4.13	□□□□□ -1.75
EDEM3-205	ENST00000466606	METTL2A	Q96IZ6	378 aa	Known RBP	4.13	□□□□□ -1.75
EDEM3-205	ENST00000466606	C7orf26	Q96N11	449 aa		4.13	□□□□□ -1.75
EDEM3-205	ENST00000466606	CMKLR1	Q99788	373 aa		4.13	□□□□□ -1.75
EDEM3-205	ENST00000466606	SPRY4	Q9C004	299 aa		4.13	□□□□□ -1.75
EDEM3-205	ENST00000466606	RETREG1	Q9H6L5	497 aa		4.13	□□□□□ -1.75
EDEM3-205	ENST00000466606	SEBOX	Q9HB31	216 aa	Predicted RBP	4.13	□□□□□ -1.75
EDEM3-205	ENST00000466606	FBRSL1	Q9HCM7	1045 aa	Known RBP	4.13	□□□□□ -1.75
EDEM3-205	ENST00000466606	WWOX	Q9NZC7	414 aa		4.13	□□□□□ -1.75
EDEM3-205	ENST00000466606	SMARCAL1	Q9NZC9	954 aa		4.13	□□□□□ -1.75
EDEM3-205	ENST00000466606	C1RL	Q9NZP8	487 aa		4.13	□□□□□ -1.75
EDEM3-205	ENST00000466606	SIX4	Q9UIU6	781 aa		4.13	□□□□□ -1.75
EDEM3-205	ENST00000466606	TSPYL4	Q9UJ04	414 aa		4.13	□□□□□ -1.75
EDEM3-205	ENST00000466606	BDP1	A6H8Y1	2624 aa		4.13	□□□□□ -1.75
EDEM3-205	ENST00000466606	COL24A1	Q17RW2	1714 aa		4.12	□□□□□ -1.75
EDEM3-205	ENST00000466606	ARFGEF2	Q9Y6D5	1785 aa		4.12	□□□□□ -1.75
EDEM3-205	ENST00000466606	SBF2	Q86WG5	1849 aa		4.12	□□□□□ -1.75
EDEM3-205	ENST00000466606		A0A1W2PQF6	199 aa		4.12	□□□□□ -1.75
EDEM3-205	ENST00000466606	SMTNL1	A8MU46	457 aa		4.12	□□□□□ -1.75
EDEM3-205	ENST00000466606	HNRNPCL2	B2RXH8	293 aa		4.12	□□□□□ -1.75
EDEM3-205	ENST00000466606	GAGE7	O76087	117 aa		4.12	□□□□□ -1.75
EDEM3-205	ENST00000466606	REC8	O95072	547 aa		4.12	□□□□□ -1.75
EDEM3-205	ENST00000466606	EGF	P01133	1207 aa		4.12	□□□□□ -1.75
EDEM3-205	ENST00000466606	GAGE12F	P0CL80	117 aa		4.12	□□□□□ -1.75
EDEM3-205	ENST00000466606	GAGE12G	P0CL81	117 aa		4.12	□□□□□ -1.75
EDEM3-205	ENST00000466606	GAGE12I	P0CL82	117 aa		4.12	□□□□□ -1.75
EDEM3-205	ENST00000466606	SRC	P12931	536 aa		4.12	□□□□□ -1.75
EDEM3-205	ENST00000466606	ZNF182	P17025	639 aa	Predicted RBP	4.12	□□□□□ -1.75
EDEM3-205	ENST00000466606	NFKBIA	P25963	317 aa		4.12	□□□□□ -1.75
EDEM3-205	ENST00000466606	MAN1A1	P33908	653 aa		4.12	□□□□□ -1.75
EDEM3-205	ENST00000466606	BSG	P35613	385 aa		4.12	□□□□□ -1.75
EDEM3-205	ENST00000466606	GAGE1	Q13065	139 aa		4.12	□□□□□ -1.75
EDEM3-205	ENST00000466606	GAGE4	Q13068	117 aa		4.12	□□□□□ -1.75
EDEM3-205	ENST00000466606	OLIG2	Q13516	323 aa		4.12	□□□□□ -1.75
EDEM3-205	ENST00000466606	RRS1	Q15050	365 aa	Known RBP	4.12	□□□□□ -1.75
EDEM3-205	ENST00000466606	C1orf141	Q5JVX7	400 aa		4.12	□□□□□ -1.75
EDEM3-205	ENST00000466606	FAAH2	Q6GMR7	532 aa		4.12	□□□□□ -1.75
EDEM3-205	ENST00000466606	SIGIRR	Q6IA17	410 aa		4.12	□□□□□ -1.75
EDEM3-205	ENST00000466606	PLEKHA7	Q6IQ23	1121 aa		4.12	□□□□□ -1.75
EDEM3-205	ENST00000466606	ZNF280D	Q6N043	979 aa		4.12	□□□□□ -1.75
EDEM3-205	ENST00000466606	KCTD18	Q6PI47	426 aa	Predicted RBP	4.12	□□□□□ -1.75
EDEM3-205	ENST00000466606	SMIM5	Q71RC9	77 aa		4.12	□□□□□ -1.75
EDEM3-205	ENST00000466606	RSRC2	Q7L4I2	434 aa	Known RBP	4.12	□□□□□ -1.75
EDEM3-205	ENST00000466606	SATL1	Q86VE3	508 aa		4.12	□□□□□ -1.75
EDEM3-205	ENST00000466606	HSCB	Q8IWL3	235 aa		4.12	□□□□□ -1.75
EDEM3-205	ENST00000466606	ZNF34	Q8IZ26	560 aa		4.12	□□□□□ -1.75
EDEM3-205	ENST00000466606	FRMD1	Q8N878	549 aa		4.12	□□□□□ -1.75
EDEM3-205	ENST00000466606	ZNF441	Q8N8Z8	693 aa		4.12	□□□□□ -1.75
EDEM3-205	ENST00000466606	ZKSCAN4	Q969J2	545 aa	Predicted RBP	4.12	□□□□□ -1.75
EDEM3-205	ENST00000466606	FAM149B1	Q96BN6	582 aa		4.12	□□□□□ -1.75
EDEM3-205	ENST00000466606	ORAI1	Q96D31	301 aa		4.12	□□□□□ -1.75
EDEM3-205	ENST00000466606	RRNAD1	Q96FB5	475 aa	Known RBP	4.12	□□□□□ -1.75
EDEM3-205	ENST00000466606	BICD1	Q96G01	975 aa		4.12	□□□□□ -1.75
EDEM3-205	ENST00000466606	TMEM19	Q96HH6	336 aa		4.12	□□□□□ -1.75
EDEM3-205	ENST00000466606	IGSF21	Q96ID5	467 aa		4.12	□□□□□ -1.75
EDEM3-205	ENST00000466606	FAM84B	Q96KN1	310 aa	Predicted RBP	4.12	□□□□□ -1.75
EDEM3-205	ENST00000466606	PCGF1	Q9BSM1	259 aa		4.12	□□□□□ -1.75
EDEM3-205	ENST00000466606	STRA6	Q9BX79	667 aa		4.12	□□□□□ -1.75
EDEM3-205	ENST00000466606	DDX31	Q9H8H2	851 aa	Known RBP	4.12	□□□□□ -1.75
EDEM3-205	ENST00000466606	RANGRF	Q9HD47	186 aa	Predicted RBP	4.12	□□□□□ -1.75
EDEM3-205	ENST00000466606	PLSCR4	Q9NRQ2	329 aa		4.12	□□□□□ -1.75
EDEM3-205	ENST00000466606	ZNF224	Q9NZL3	707 aa		4.12	□□□□□ -1.75
EDEM3-205	ENST00000466606	DLGAP2	Q9P1A6	1054 aa		4.12	□□□□□ -1.75
EDEM3-205	ENST00000466606	ADAM18	Q9Y3Q7	739 aa		4.12	□□□□□ -1.75
EDEM3-205	ENST00000466606	PDS5A	Q29RF7	1337 aa	Known RBP	4.12	□□□□□ -1.75
EDEM3-205	ENST00000466606	LTBP1	Q14766	1721 aa		4.12	□□□□□ -1.75
EDEM3-205	ENST00000466606	MUC3A	Q02505	3323 aa		4.11	□□□□□ -1.75
EDEM3-205	ENST00000466606		A0A0G2JPF8	293 aa		4.11	□□□□□ -1.75
EDEM3-205	ENST00000466606	HNRNPCL3	B7ZW38	293 aa		4.11	□□□□□ -1.75
EDEM3-205	ENST00000466606	ZNF587B	E7ETH6	402 aa		4.11	□□□□□ -1.75
EDEM3-205	ENST00000466606	HNRNPCL1	O60812	293 aa	Known RBP	4.11	□□□□□ -1.75
EDEM3-205	ENST00000466606	TMEM63A	O94886	807 aa		4.11	□□□□□ -1.75
EDEM3-205	ENST00000466606	DDX58	O95786	925 aa	Known RBP	4.11	□□□□□ -1.75
EDEM3-205	ENST00000466606	HMOX1	P09601	288 aa		4.11	□□□□□ -1.75
EDEM3-205	ENST00000466606	HNRNPCL4	P0DMR1	293 aa		4.11	□□□□□ -1.75
EDEM3-205	ENST00000466606	DAO	P14920	347 aa		4.11	□□□□□ -1.75
EDEM3-205	ENST00000466606	MCC	P23508	829 aa		4.11	□□□□□ -1.75
EDEM3-205	ENST00000466606	MAP2K2	P36507	400 aa		4.11	□□□□□ -1.75
EDEM3-205	ENST00000466606	HNRNPH2	P55795	449 aa	Known RBP	4.11	□□□□□ -1.75
EDEM3-205	ENST00000466606	NLRP5	P59047	1200 aa		4.11	□□□□□ -1.75
EDEM3-205	ENST00000466606	SEC61B	P60468	96 aa	Known RBP	4.11	□□□□□ -1.75
EDEM3-205	ENST00000466606	ERVFC1-1	P60608	527 aa		4.11	□□□□□ -1.75
EDEM3-205	ENST00000466606	SLC20A2	Q08357	652 aa		4.11	□□□□□ -1.75
EDEM3-205	ENST00000466606	GOLGA8DP	Q0D2H9	430 aa		4.11	□□□□□ -1.75
EDEM3-205	ENST00000466606	TEF	Q10587	303 aa		4.11	□□□□□ -1.75
EDEM3-205	ENST00000466606	TNFAIP1	Q13829	316 aa		4.11	□□□□□ -1.75
EDEM3-205	ENST00000466606	CDON	Q4KMG0	1287 aa		4.11	□□□□□ -1.75
EDEM3-205	ENST00000466606	GPATCH4	Q5T3I0	446 aa	Known RBP	4.11	□□□□□ -1.75
EDEM3-205	ENST00000466606	CCNI2	Q6ZMN8	369 aa	Predicted RBP	4.11	□□□□□ -1.75
EDEM3-205	ENST00000466606	DPPA4	Q7L190	304 aa		4.11	□□□□□ -1.75
EDEM3-205	ENST00000466606	PXK	Q7Z7A4	578 aa		4.11	□□□□□ -1.75
EDEM3-205	ENST00000466606	NR2C2AP	Q86WQ0	139 aa		4.11	□□□□□ -1.75
EDEM3-205	ENST00000466606	ERC1	Q8IUD2	1116 aa		4.11	□□□□□ -1.75
EDEM3-205	ENST00000466606	CHERP	Q8IWX8	916 aa	Known RBP	4.11	□□□□□ -1.75
EDEM3-205	ENST00000466606	PDILT	Q8N807	584 aa		4.11	□□□□□ -1.75
EDEM3-205	ENST00000466606	TEX19	Q8NA77	164 aa		4.11	□□□□□ -1.75
EDEM3-205	ENST00000466606	ANKRD52	Q8NB46	1076 aa		4.11	□□□□□ -1.75
EDEM3-205	ENST00000466606	WFIKKN2	Q8TEU8	576 aa		4.11	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms