RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 SMAD1Q15797 465 aaKnown RBP12.19□□□□□ -0.46
CHPF2-202ENST00000465601 C14orf28Q4W4Y0 310 aa12.19□□□□□ -0.46
CHPF2-202ENST00000465601 FASTKD1Q53R41 847 aaKnown RBP12.19□□□□□ -0.46
CHPF2-202ENST00000465601 PERM1Q5SV97 790 aa12.19□□□□□ -0.46
CHPF2-202ENST00000465601 ZNF572Q7Z3I7 529 aaPredicted RBP12.19□□□□□ -0.46
CHPF2-202ENST00000465601 MAATS1Q7Z4T9 603 aa12.19□□□□□ -0.46
CHPF2-202ENST00000465601 RAB44Q7Z6P3 723 aaPredicted RBP12.19□□□□□ -0.46
CHPF2-202ENST00000465601 HOOK3Q86VS8 718 aa12.19□□□□□ -0.46
CHPF2-202ENST00000465601 NAGSQ8N159 534 aa12.19□□□□□ -0.46
CHPF2-202ENST00000465601 AGGF1Q8N302 714 aaeCLIP12.19□□□□□ -0.46
CHPF2-202ENST00000465601 ARL14Q8N4G2 192 aa12.19□□□□□ -0.46
CHPF2-202ENST00000465601 HEXDCQ8WVB3 486 aa12.19□□□□□ -0.46
CHPF2-202ENST00000465601 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.19□□□□□ -0.46
CHPF2-202ENST00000465601 SIGLEC10Q96LC7 697 aa12.19□□□□□ -0.46
CHPF2-202ENST00000465601 PWWP2AQ96N64 755 aa12.19□□□□□ -0.46
CHPF2-202ENST00000465601 TIMM29Q9BSF4 260 aa12.19□□□□□ -0.46
CHPF2-202ENST00000465601 PRDM8Q9NQV8 689 aa12.19□□□□□ -0.46
CHPF2-202ENST00000465601 SAMD15Q9P1V8 674 aa12.19□□□□□ -0.46
CHPF2-202ENST00000465601 MAD1L1Q9Y6D9 718 aa12.19□□□□□ -0.46
CHPF2-202ENST00000465601 IGLV3-16A0A075B6K0 115 aa12.18□□□□□ -0.46
CHPF2-202ENST00000465601 MAGEB16A2A368 324 aa12.18□□□□□ -0.46
CHPF2-202ENST00000465601 CASC3O15234 703 aaKnown RBP12.18□□□□□ -0.46
CHPF2-202ENST00000465601 SGTAO43765 313 aa12.18□□□□□ -0.46
CHPF2-202ENST00000465601 BANF1O75531 89 aa12.18□□□□□ -0.46
CHPF2-202ENST00000465601 SEC31AO94979 1220 aaKnown RBP12.18□□□□□ -0.46
CHPF2-202ENST00000465601 VAPBO95292 243 aa12.18□□□□□ -0.46
CHPF2-202ENST00000465601 SPINK2P20155 84 aa12.18□□□□□ -0.46
CHPF2-202ENST00000465601 PMLP29590 882 aa12.18□□□□□ -0.46
CHPF2-202ENST00000465601 MAGEA3P43357 314 aa12.18□□□□□ -0.46
CHPF2-202ENST00000465601 RPL21P46778 160 aaKnown RBP12.18□□□□□ -0.46
CHPF2-202ENST00000465601 CLCNKAP51800 687 aa12.18□□□□□ -0.46
CHPF2-202ENST00000465601 E2F1Q01094 437 aa12.18□□□□□ -0.46
CHPF2-202ENST00000465601 HLTFQ14527 1009 aaKnown RBP eCLIP12.18□□□□□ -0.46
CHPF2-202ENST00000465601 SEMA3AQ14563 771 aa12.18□□□□□ -0.46
CHPF2-202ENST00000465601 MORF4L2Q15014 288 aa12.18□□□□□ -0.46
CHPF2-202ENST00000465601 WHAMMP3Q1A5X7 153 aa12.18□□□□□ -0.46
CHPF2-202ENST00000465601 ANKRD20A4Q4UJ75 823 aa12.18□□□□□ -0.46
CHPF2-202ENST00000465601 MSS51Q4VC12 460 aa12.18□□□□□ -0.46
CHPF2-202ENST00000465601 HIBCHQ6NVY1 386 aaPredicted RBP12.18□□□□□ -0.46
CHPF2-202ENST00000465601 IYDQ6PHW0 289 aa12.18□□□□□ -0.46
CHPF2-202ENST00000465601 LDB1Q86U70 411 aaPredicted RBP12.18□□□□□ -0.46
CHPF2-202ENST00000465601 AMZ2Q86W34 360 aa12.18□□□□□ -0.46
CHPF2-202ENST00000465601 C17orf82Q86X59 251 aaPredicted RBP12.18□□□□□ -0.46
CHPF2-202ENST00000465601 CLDN19Q8N6F1 224 aa12.18□□□□□ -0.46
CHPF2-202ENST00000465601 KIF18AQ8NI77 898 aa12.18□□□□□ -0.46
CHPF2-202ENST00000465601 NAT6Q93015 286 aa12.18□□□□□ -0.46
CHPF2-202ENST00000465601 CCDC74AQ96AQ1 378 aa12.18□□□□□ -0.46
CHPF2-202ENST00000465601 SNF8Q96H20 258 aa12.18□□□□□ -0.46
CHPF2-202ENST00000465601 ZNF514Q96K75 400 aaPredicted RBP12.18□□□□□ -0.46
CHPF2-202ENST00000465601 FCRL3Q96P31 734 aaPredicted RBP12.18□□□□□ -0.46
CHPF2-202ENST00000465601 DPH5Q9H2P9 285 aa12.18□□□□□ -0.46
CHPF2-202ENST00000465601 CATSPERZQ9NTU4 200 aa12.18□□□□□ -0.46
CHPF2-202ENST00000465601 MARCH4Q9P2E8 410 aaPredicted RBP12.18□□□□□ -0.46
CHPF2-202ENST00000465601 LRIT1Q9P2V4 623 aa12.18□□□□□ -0.46
CHPF2-202ENST00000465601 RABGEF1Q9UJ41 708 aa12.18□□□□□ -0.46
CHPF2-202ENST00000465601 ANAPC5Q9UJX4 755 aa12.18□□□□□ -0.46
CHPF2-202ENST00000465601 DNMT3AQ9Y6K1 912 aaPredicted RBP12.18□□□□□ -0.46
CHPF2-202ENST00000465601 PRSS21Q9Y6M0 314 aa12.18□□□□□ -0.46
CHPF2-202ENST00000465601 RNF215Q9Y6U7 377 aa12.18□□□□□ -0.46
CHPF2-202ENST00000465601 ACACAQ13085 2346 aa12.17□□□□□ -0.46
CHPF2-202ENST00000465601 FAM237BA0A1B0GVD1 139 aa12.17□□□□□ -0.46
CHPF2-202ENST00000465601 A6NCN8 305 aa12.17□□□□□ -0.46
CHPF2-202ENST00000465601 MGAT4DA6NG13 374 aa12.17□□□□□ -0.46
CHPF2-202ENST00000465601 PDZK1P1A8MUH7 402 aa12.17□□□□□ -0.46
CHPF2-202ENST00000465601 GOLGA8KD6RF30 607 aa12.17□□□□□ -0.46
CHPF2-202ENST00000465601 GOLGA8TH3BQL2 631 aa12.17□□□□□ -0.46
CHPF2-202ENST00000465601 CD3EAPO15446 510 aaKnown RBP12.17□□□□□ -0.46
CHPF2-202ENST00000465601 OPA1O60313 960 aa12.17□□□□□ -0.46
CHPF2-202ENST00000465601 OR1I1O60431 355 aa12.17□□□□□ -0.46
CHPF2-202ENST00000465601 GP1BAP07359 652 aa12.17□□□□□ -0.46
CHPF2-202ENST00000465601 CDK4P11802 303 aa12.17□□□□□ -0.46
CHPF2-202ENST00000465601 GLB1P16278 677 aa12.17□□□□□ -0.46
CHPF2-202ENST00000465601 VCLP18206 1134 aa12.17□□□□□ -0.46
CHPF2-202ENST00000465601 IDSP22304 550 aa12.17□□□□□ -0.46
CHPF2-202ENST00000465601 ARNTP27540 789 aa12.17□□□□□ -0.46
CHPF2-202ENST00000465601 RPL10P27635 214 aaKnown RBP12.17□□□□□ -0.46
CHPF2-202ENST00000465601 INSM1Q01101 510 aaPredicted RBP12.17□□□□□ -0.46
CHPF2-202ENST00000465601 DHX9Q08211 1270 aaKnown RBP12.17□□□□□ -0.46
CHPF2-202ENST00000465601 BIRC2Q13490 618 aa12.17□□□□□ -0.46
CHPF2-202ENST00000465601 NFE2L1Q14494 772 aa12.17□□□□□ -0.46
CHPF2-202ENST00000465601 ITIH4Q14624 930 aa12.17□□□□□ -0.46
CHPF2-202ENST00000465601 SEPT7Q16181 437 aaKnown RBP12.17□□□□□ -0.46
CHPF2-202ENST00000465601 BBS9Q3SYG4 887 aa12.17□□□□□ -0.46
CHPF2-202ENST00000465601 BCL7AQ4VC05 210 aa12.17□□□□□ -0.46
CHPF2-202ENST00000465601 LYPLAL1Q5VWZ2 237 aa12.17□□□□□ -0.46
CHPF2-202ENST00000465601 FAM83HQ6ZRV2 1179 aaPredicted RBP12.17□□□□□ -0.46
CHPF2-202ENST00000465601 MARCH9Q86YJ5 346 aa12.17□□□□□ -0.46
CHPF2-202ENST00000465601 Q8N9G6 341 aaPredicted RBP12.17□□□□□ -0.46
CHPF2-202ENST00000465601 OR6C4Q8NGE1 309 aa12.17□□□□□ -0.46
CHPF2-202ENST00000465601 MAPK15Q8TD08 544 aa12.17□□□□□ -0.46
CHPF2-202ENST00000465601 SLC37A2Q8TED4 501 aa12.17□□□□□ -0.46
CHPF2-202ENST00000465601 ZNF669Q96BR6 464 aaPredicted RBP12.17□□□□□ -0.46
CHPF2-202ENST00000465601 SGSM3Q96HU1 749 aa12.17□□□□□ -0.46
CHPF2-202ENST00000465601 TTC1Q99614 292 aa12.17□□□□□ -0.46
CHPF2-202ENST00000465601 CCDC3Q9BQI4 270 aa12.17□□□□□ -0.46
CHPF2-202ENST00000465601 ERP44Q9BS26 406 aa12.17□□□□□ -0.46
CHPF2-202ENST00000465601 ABCG4Q9H172 646 aa12.17□□□□□ -0.46
CHPF2-202ENST00000465601 IL1RAPL1Q9NZN1 696 aa12.17□□□□□ -0.46
CHPF2-202ENST00000465601 SCHIP1Q9P0W5 487 aaPredicted RBP12.17□□□□□ -0.46
CHPF2-202ENST00000465601 FAM8A1Q9UBU6 413 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms