RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 TCEAL2Q9H3H9 227 aaPredicted RBP17.26■□□□□ 0.35
CPSF4-209ENST00000465132 BPIFA1Q9NP55 256 aa17.26■□□□□ 0.35
CPSF4-209ENST00000465132 SATB2Q9UPW6 733 aa17.26■□□□□ 0.35
CPSF4-209ENST00000465132 VPS9D1Q9Y2B5 631 aa17.26■□□□□ 0.35
CPSF4-209ENST00000465132 RPS6KL1Q9Y6S9 549 aa17.26■□□□□ 0.35
CPSF4-209ENST00000465132 SCN8AQ9UQD0 1980 aa17.26■□□□□ 0.35
CPSF4-209ENST00000465132 ZNF106Q9H2Y7 1883 aaKnown RBP17.25■□□□□ 0.35
CPSF4-209ENST00000465132 A0A1W2PNU3 283 aaPredicted RBP17.25■□□□□ 0.35
CPSF4-209ENST00000465132 GPR89AB7ZAQ6 455 aa17.25■□□□□ 0.35
CPSF4-209ENST00000465132 ERVH48-1M5A8F1 160 aa17.25■□□□□ 0.35
CPSF4-209ENST00000465132 PRAMEF1O95521 474 aa17.25■□□□□ 0.35
CPSF4-209ENST00000465132 PCCBP05166 539 aa17.25■□□□□ 0.35
CPSF4-209ENST00000465132 GPR89BP0CG08 455 aa17.25■□□□□ 0.35
CPSF4-209ENST00000465132 RALBP11234 206 aa17.25■□□□□ 0.35
CPSF4-209ENST00000465132 IGFALSP35858 605 aa17.25■□□□□ 0.35
CPSF4-209ENST00000465132 TRIM23P36406 574 aa17.25■□□□□ 0.35
CPSF4-209ENST00000465132 CACNG1Q06432 222 aa17.25■□□□□ 0.35
CPSF4-209ENST00000465132 LONRF1Q17RB8 773 aa17.25■□□□□ 0.35
CPSF4-209ENST00000465132 FASTKD1Q53R41 847 aaKnown RBP17.25■□□□□ 0.35
CPSF4-209ENST00000465132 PRRT3Q5FWE3 981 aa17.25■□□□□ 0.35
CPSF4-209ENST00000465132 C3orf38Q5JPI3 329 aa17.25■□□□□ 0.35
CPSF4-209ENST00000465132 LDLRAP1Q5SW96 308 aa17.25■□□□□ 0.35
CPSF4-209ENST00000465132 FNBP1LQ5T0N5 605 aa17.25■□□□□ 0.35
CPSF4-209ENST00000465132 KIAA0930Q6ICG6 404 aaPredicted RBP17.25■□□□□ 0.35
CPSF4-209ENST00000465132 MRNIPQ6NTE8 343 aa17.25■□□□□ 0.35
CPSF4-209ENST00000465132 RBM44Q6ZP01 1051 aaKnown RBP17.25■□□□□ 0.35
CPSF4-209ENST00000465132 SNX20Q7Z614 316 aa17.25■□□□□ 0.35
CPSF4-209ENST00000465132 SDCCAG8Q86SQ7 713 aaPredicted RBP17.25■□□□□ 0.35
CPSF4-209ENST00000465132 CCDC25Q86WR0 208 aa17.25■□□□□ 0.35
CPSF4-209ENST00000465132 PHYKPLQ8IUZ5 450 aa17.25■□□□□ 0.35
CPSF4-209ENST00000465132 ZBED8Q8IZ13 594 aa17.25■□□□□ 0.35
CPSF4-209ENST00000465132 MPP5Q8N3R9 675 aa17.25■□□□□ 0.35
CPSF4-209ENST00000465132 GPR26Q8NDV2 337 aa17.25■□□□□ 0.35
CPSF4-209ENST00000465132 OR6P1Q8NGX9 317 aa17.25■□□□□ 0.35
CPSF4-209ENST00000465132 ZNF398Q8TD17 642 aa17.25■□□□□ 0.35
CPSF4-209ENST00000465132 ATXN7L3BQ96GX2 97 aa17.25■□□□□ 0.35
CPSF4-209ENST00000465132 TBATAQ96M53 351 aa17.25■□□□□ 0.35
CPSF4-209ENST00000465132 SMIM14Q96QK8 99 aa17.25■□□□□ 0.35
CPSF4-209ENST00000465132 BOCQ9BWV1 1114 aa17.25■□□□□ 0.35
CPSF4-209ENST00000465132 DPH1Q9BZG8 443 aa17.25■□□□□ 0.35
CPSF4-209ENST00000465132 CPNE5Q9HCH3 593 aa17.25■□□□□ 0.35
CPSF4-209ENST00000465132 SAYSD1Q9NPB0 183 aa17.25■□□□□ 0.35
CPSF4-209ENST00000465132 IL26Q9NPH9 171 aa17.25■□□□□ 0.35
CPSF4-209ENST00000465132 APOBEC3BQ9UH17 382 aaKnown RBP17.25■□□□□ 0.35
CPSF4-209ENST00000465132 CD84Q9UIB8 345 aa17.25■□□□□ 0.35
CPSF4-209ENST00000465132 PNMA8BQ9ULN7 279 aaPredicted RBP17.25■□□□□ 0.35
CPSF4-209ENST00000465132 ENTPD2Q9Y5L3 495 aa17.25■□□□□ 0.35
CPSF4-209ENST00000465132 CFAP99D6REC4 459 aa17.24■□□□□ 0.35
CPSF4-209ENST00000465132 SRP72O76094 671 aaKnown RBP17.24■□□□□ 0.35
CPSF4-209ENST00000465132 ZIC2O95409 532 aaPredicted RBP17.24■□□□□ 0.35
CPSF4-209ENST00000465132 PHBP35232 272 aa17.24■□□□□ 0.35
CPSF4-209ENST00000465132 ELK3P41970 407 aa17.24■□□□□ 0.35
CPSF4-209ENST00000465132 KIAA1024LP59773 190 aa17.24■□□□□ 0.35
CPSF4-209ENST00000465132 C1orf61Q13536 156 aa17.24■□□□□ 0.35
CPSF4-209ENST00000465132 THOC5Q13769 683 aaKnown RBP17.24■□□□□ 0.35
CPSF4-209ENST00000465132 FRG1Q14331 258 aaKnown RBP17.24■□□□□ 0.35
CPSF4-209ENST00000465132 INPP5AQ14642 412 aa17.24■□□□□ 0.35
CPSF4-209ENST00000465132 PTPRRQ15256 657 aa17.24■□□□□ 0.35
CPSF4-209ENST00000465132 ANKRD20A4Q4UJ75 823 aa17.24■□□□□ 0.35
CPSF4-209ENST00000465132 PERM1Q5SV97 790 aa17.24■□□□□ 0.35
CPSF4-209ENST00000465132 ALS2CLQ60I27 953 aa17.24■□□□□ 0.35
CPSF4-209ENST00000465132 FAM151BQ6UXP7 276 aa17.24■□□□□ 0.35
CPSF4-209ENST00000465132 PHACTR4Q8IZ21 702 aa17.24■□□□□ 0.35
CPSF4-209ENST00000465132 CNPY4Q8N129 248 aa17.24■□□□□ 0.35
CPSF4-209ENST00000465132 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.24■□□□□ 0.35
CPSF4-209ENST00000465132 OR13C4Q8NGS5 318 aa17.24■□□□□ 0.35
CPSF4-209ENST00000465132 OR4L1Q8NH43 312 aa17.24■□□□□ 0.35
CPSF4-209ENST00000465132 GLMNQ92990 594 aa17.24■□□□□ 0.35
CPSF4-209ENST00000465132 SCAMP4Q969E2 229 aa17.24■□□□□ 0.35
CPSF4-209ENST00000465132 ZNF669Q96BR6 464 aaPredicted RBP17.24■□□□□ 0.35
CPSF4-209ENST00000465132 EID2BQ96D98 161 aa17.24■□□□□ 0.35
CPSF4-209ENST00000465132 DNAJC1Q96KC8 554 aaKnown RBP17.24■□□□□ 0.35
CPSF4-209ENST00000465132 SLC46A1Q96NT5 459 aa17.24■□□□□ 0.35
CPSF4-209ENST00000465132 APOOQ9BUR5 198 aa17.24■□□□□ 0.35
CPSF4-209ENST00000465132 LRRC61Q9BV99 259 aa17.24■□□□□ 0.35
CPSF4-209ENST00000465132 TEX101Q9BY14 249 aa17.24■□□□□ 0.35
CPSF4-209ENST00000465132 ASB8Q9H765 288 aa17.24■□□□□ 0.35
CPSF4-209ENST00000465132 TREX1Q9NSU2 369 aa17.24■□□□□ 0.35
CPSF4-209ENST00000465132 ZDHHC18Q9NUE0 388 aa17.24■□□□□ 0.35
CPSF4-209ENST00000465132 SMOXQ9NWM0 555 aa17.24■□□□□ 0.35
CPSF4-209ENST00000465132 FKBPLQ9UIM3 349 aa17.24■□□□□ 0.35
CPSF4-209ENST00000465132 CRLS1Q9UJA2 301 aa17.24■□□□□ 0.35
CPSF4-209ENST00000465132 TEX264Q9Y6I9 313 aa17.24■□□□□ 0.35
CPSF4-209ENST00000465132 FAM169AQ9Y6X4 670 aa17.24■□□□□ 0.35
CPSF4-209ENST00000465132 HELZ2Q9BYK8 2649 aaKnown RBP17.24■□□□□ 0.35
CPSF4-209ENST00000465132 LMO7DNF2Z398 122 aa17.23■□□□□ 0.35
CPSF4-209ENST00000465132 TP73O15350 636 aa17.23■□□□□ 0.35
CPSF4-209ENST00000465132 KLK10O43240 276 aa17.23■□□□□ 0.35
CPSF4-209ENST00000465132 BUD23O43709 281 aaKnown RBP17.23■□□□□ 0.35
CPSF4-209ENST00000465132 TCEA3O75764 348 aa17.23■□□□□ 0.35
CPSF4-209ENST00000465132 SLC25A14O95258 325 aaPredicted RBP17.23■□□□□ 0.35
CPSF4-209ENST00000465132 MYCLP1P12525 358 aaPredicted RBP17.23■□□□□ 0.35
CPSF4-209ENST00000465132 PLA2G2AP14555 144 aa17.23■□□□□ 0.35
CPSF4-209ENST00000465132 RBMS1P29558 406 aaKnown RBP17.23■□□□□ 0.35
CPSF4-209ENST00000465132 MC4RP32245 332 aa17.23■□□□□ 0.35
CPSF4-209ENST00000465132 RPIAP49247 311 aa17.23■□□□□ 0.35
CPSF4-209ENST00000465132 BLKP51451 505 aa17.23■□□□□ 0.35
CPSF4-209ENST00000465132 CRADDP78560 199 aa17.23■□□□□ 0.35
CPSF4-209ENST00000465132 TMPRSS15P98073 1019 aa17.23■□□□□ 0.35
CPSF4-209ENST00000465132 RHDQ02161 417 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms