RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 GCNT1Q02742 428 aa9.23□□□□□ -0.93
APP-213ENST00000464867 BCL2L1Q07817 233 aa9.23□□□□□ -0.93
APP-213ENST00000464867 SKOR2Q2VWA4 1001 aaPredicted RBP9.23□□□□□ -0.93
APP-213ENST00000464867 B3GNTL1Q67FW5 361 aaPredicted RBP9.23□□□□□ -0.93
APP-213ENST00000464867 IRGCQ6NXR0 463 aa9.23□□□□□ -0.93
APP-213ENST00000464867 FAM92BQ6ZTR7 304 aa9.23□□□□□ -0.93
APP-213ENST00000464867 CHST15Q7LFX5 561 aaPredicted RBP9.23□□□□□ -0.93
APP-213ENST00000464867 PHLDB2Q86SQ0 1253 aa9.23□□□□□ -0.93
APP-213ENST00000464867 ZSWIM9Q86XI8 627 aa9.23□□□□□ -0.93
APP-213ENST00000464867 ZNF397Q8NF99 534 aaPredicted RBP9.23□□□□□ -0.93
APP-213ENST00000464867 PPP4R1Q8TF05 950 aa9.23□□□□□ -0.93
APP-213ENST00000464867 COQ10AQ96MF6 247 aa9.23□□□□□ -0.93
APP-213ENST00000464867 ZNF396Q96N95 335 aaPredicted RBP9.23□□□□□ -0.93
APP-213ENST00000464867 TBCBQ99426 244 aa9.23□□□□□ -0.93
APP-213ENST00000464867 SLX1AQ9BQ83 275 aa9.23□□□□□ -0.93
APP-213ENST00000464867 ZNF552Q9H707 407 aaPredicted RBP9.23□□□□□ -0.93
APP-213ENST00000464867 LHX3Q9UBR4 397 aa9.23□□□□□ -0.93
APP-213ENST00000464867 UBA2Q9UBT2 640 aaPredicted RBP9.23□□□□□ -0.93
APP-213ENST00000464867 TBC1D29Q9UFV1 150 aa9.23□□□□□ -0.93
APP-213ENST00000464867 ARMCX3Q9UH62 379 aaPredicted RBP9.23□□□□□ -0.93
APP-213ENST00000464867 PADI2Q9Y2J8 665 aa9.23□□□□□ -0.93
APP-213ENST00000464867 NSD1Q96L73 2696 aaPredicted RBP9.23□□□□□ -0.93
APP-213ENST00000464867 SLC16A3O15427 465 aaKnown RBP9.22□□□□□ -0.93
APP-213ENST00000464867 CREB3O43889 395 aa9.22□□□□□ -0.93
APP-213ENST00000464867 KIF1CO43896 1103 aaKnown RBP9.22□□□□□ -0.93
APP-213ENST00000464867 ESRRAP11474 423 aaPredicted RBP9.22□□□□□ -0.93
APP-213ENST00000464867 GM2AP17900 193 aa9.22□□□□□ -0.93
APP-213ENST00000464867 TFE3P19532 575 aaPredicted RBP9.22□□□□□ -0.93
APP-213ENST00000464867 CA5AP35218 305 aa9.22□□□□□ -0.93
APP-213ENST00000464867 FMO5P49326 533 aa9.22□□□□□ -0.93
APP-213ENST00000464867 KCNK10P57789 538 aa9.22□□□□□ -0.93
APP-213ENST00000464867 PAK1Q13153 545 aa9.22□□□□□ -0.93
APP-213ENST00000464867 ZNF169Q14929 603 aaPredicted RBP9.22□□□□□ -0.93
APP-213ENST00000464867 DCAF10Q5QP82 559 aa9.22□□□□□ -0.93
APP-213ENST00000464867 OTUD1Q5VV17 481 aaPredicted RBP9.22□□□□□ -0.93
APP-213ENST00000464867 IRAK1BP1Q5VVH5 260 aa9.22□□□□□ -0.93
APP-213ENST00000464867 GFRALQ6UXV0 394 aa9.22□□□□□ -0.93
APP-213ENST00000464867 TMEM26Q6ZUK4 368 aa9.22□□□□□ -0.93
APP-213ENST00000464867 CXXC5Q7LFL8 322 aaKnown RBP9.22□□□□□ -0.93
APP-213ENST00000464867 SRLQ86TD4 932 aa9.22□□□□□ -0.93
APP-213ENST00000464867 C1orf131Q8NDD1 294 aaKnown RBP9.22□□□□□ -0.93
APP-213ENST00000464867 OR8K5Q8NH50 307 aa9.22□□□□□ -0.93
APP-213ENST00000464867 SHC3Q92529 594 aa9.22□□□□□ -0.93
APP-213ENST00000464867 UBXN4Q92575 508 aa9.22□□□□□ -0.93
APP-213ENST00000464867 NT5C3BQ969T7 300 aa9.22□□□□□ -0.93
APP-213ENST00000464867 CLIP3Q96DZ5 547 aa9.22□□□□□ -0.93
APP-213ENST00000464867 DTD2Q96FN9 168 aa9.22□□□□□ -0.93
APP-213ENST00000464867 ZNF514Q96K75 400 aaPredicted RBP9.22□□□□□ -0.93
APP-213ENST00000464867 CNDP1Q96KN2 507 aa9.22□□□□□ -0.93
APP-213ENST00000464867 FOXC2Q99958 501 aa9.22□□□□□ -0.93
APP-213ENST00000464867 OGFRQ9NZT2 677 aa9.22□□□□□ -0.93
APP-213ENST00000464867 A0A0U1RQS6 177 aa9.21□□□□□ -0.94
APP-213ENST00000464867 CLDN14O95500 239 aa9.21□□□□□ -0.94
APP-213ENST00000464867 GHRHP01286 108 aa9.21□□□□□ -0.94
APP-213ENST00000464867 PYGLP06737 847 aa9.21□□□□□ -0.94
APP-213ENST00000464867 CYP2A6P11509 494 aaPredicted RBP9.21□□□□□ -0.94
APP-213ENST00000464867 FOLR1P15328 257 aa9.21□□□□□ -0.94
APP-213ENST00000464867 ETV3P41162 512 aa9.21□□□□□ -0.94
APP-213ENST00000464867 ME1P48163 572 aa9.21□□□□□ -0.94
APP-213ENST00000464867 YBEYP58557 167 aaPredicted RBP9.21□□□□□ -0.94
APP-213ENST00000464867 RBPJQ06330 500 aa9.21□□□□□ -0.94
APP-213ENST00000464867 Q0VFX4 171 aa9.21□□□□□ -0.94
APP-213ENST00000464867 GPS2Q13227 327 aa9.21□□□□□ -0.94
APP-213ENST00000464867 CYTH1Q15438 398 aa9.21□□□□□ -0.94
APP-213ENST00000464867 ZCWPW2Q504Y3 356 aa9.21□□□□□ -0.94
APP-213ENST00000464867 DUS1LQ6P1R4 473 aaKnown RBP9.21□□□□□ -0.94
APP-213ENST00000464867 BIVMQ86UB2 503 aa9.21□□□□□ -0.94
APP-213ENST00000464867 NLRP14Q86W24 1093 aa9.21□□□□□ -0.94
APP-213ENST00000464867 FAM131BQ86XD5 332 aa9.21□□□□□ -0.94
APP-213ENST00000464867 PHYKPLQ8IUZ5 450 aa9.21□□□□□ -0.94
APP-213ENST00000464867 PASD1Q8IV76 773 aa9.21□□□□□ -0.94
APP-213ENST00000464867 CPT1BQ92523 772 aa9.21□□□□□ -0.94
APP-213ENST00000464867 SLC35C1Q96A29 364 aa9.21□□□□□ -0.94
APP-213ENST00000464867 TBC1D31Q96DN5 1066 aa9.21□□□□□ -0.94
APP-213ENST00000464867 LRFN5Q96NI6 719 aa9.21□□□□□ -0.94
APP-213ENST00000464867 GBP5Q96PP8 586 aa9.21□□□□□ -0.94
APP-213ENST00000464867 TSG101Q99816 390 aa9.21□□□□□ -0.94
APP-213ENST00000464867 KCND1Q9NSA2 647 aa9.21□□□□□ -0.94
APP-213ENST00000464867 B4GALT6Q9UBX8 382 aa9.21□□□□□ -0.94
APP-213ENST00000464867 TRIM33Q9UPN9 1127 aa9.21□□□□□ -0.94
APP-213ENST00000464867 CNTN6Q9UQ52 1028 aa9.21□□□□□ -0.94
APP-213ENST00000464867 KCNK6Q9Y257 313 aa9.21□□□□□ -0.94
APP-213ENST00000464867 FN1P02751 2386 aaKnown RBP9.21□□□□□ -0.94
APP-213ENST00000464867 ZNF469Q96JG9 3925 aaPredicted RBP9.21□□□□□ -0.94
APP-213ENST00000464867 SEC16AO15027 2179 aa9.2□□□□□ -0.94
APP-213ENST00000464867 A0A1W2PQ67 120 aa9.2□□□□□ -0.94
APP-213ENST00000464867 C9J4A7 227 aa9.2□□□□□ -0.94
APP-213ENST00000464867 C19orf84I3L1E1 186 aa9.2□□□□□ -0.94
APP-213ENST00000464867 PSMD11O00231 422 aa9.2□□□□□ -0.94
APP-213ENST00000464867 PCDH17O14917 1159 aa9.2□□□□□ -0.94
APP-213ENST00000464867 YEATS4O95619 227 aa9.2□□□□□ -0.94
APP-213ENST00000464867 JCHAINP01591 159 aa9.2□□□□□ -0.94
APP-213ENST00000464867 ERBB2P04626 1255 aa9.2□□□□□ -0.94
APP-213ENST00000464867 EBLN1P0CF75 366 aa9.2□□□□□ -0.94
APP-213ENST00000464867 ACP5P13686 325 aa9.2□□□□□ -0.94
APP-213ENST00000464867 XRCC1P18887 633 aaPredicted RBP9.2□□□□□ -0.94
APP-213ENST00000464867 VIPR1P32241 457 aa9.2□□□□□ -0.94
APP-213ENST00000464867 USP8P40818 1118 aa9.2□□□□□ -0.94
APP-213ENST00000464867 HADHAP40939 763 aa9.2□□□□□ -0.94
APP-213ENST00000464867 KIR3DL1P43629 444 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms