RNA–Protein interactions for RNA: ENST00000464553.2

SSNA1-204, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSNA1, Length 723 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-204ENST00000464553 NLRP9Q7RTR0 991 aa16.01■□□□□ 0.15
SSNA1-204ENST00000464553 CCDC89Q8N998 374 aa16.01■□□□□ 0.15
SSNA1-204ENST00000464553 ZFPM2Q8WW38 1151 aa16.01■□□□□ 0.15
SSNA1-204ENST00000464553 C1orf54Q8WWF1 131 aa16.01■□□□□ 0.15
SSNA1-204ENST00000464553 ANP32BQ92688 251 aaKnown RBP16.01■□□□□ 0.15
SSNA1-204ENST00000464553 PEX13Q92968 403 aa16.01■□□□□ 0.15
SSNA1-204ENST00000464553 LINC00615Q96LM1 132 aaPredicted RBP16.01■□□□□ 0.15
SSNA1-204ENST00000464553 FOXP3Q9BZS1 431 aa16.01■□□□□ 0.15
SSNA1-204ENST00000464553 OSGEPL1Q9H4B0 414 aa16.01■□□□□ 0.15
SSNA1-204ENST00000464553 POT1Q9NUX5 634 aa16.01■□□□□ 0.15
SSNA1-204ENST00000464553 ACSL5Q9ULC5 683 aa16.01■□□□□ 0.15
SSNA1-204ENST00000464553 SLC30A1Q9Y6M5 507 aa16.01■□□□□ 0.15
SSNA1-204ENST00000464553 URB1O60287 2271 aaKnown RBP16.01■□□□□ 0.15
SSNA1-204ENST00000464553 COL27A1Q8IZC6 1860 aaPredicted RBP16■□□□□ 0.15
SSNA1-204ENST00000464553 TRBV23OR9-2A0A075B6M9 112 aa16■□□□□ 0.15
SSNA1-204ENST00000464553 TRBV5-4A0A0C4DH59 114 aa16■□□□□ 0.15
SSNA1-204ENST00000464553 IGHV5-10-1A0A0J9YXX1 117 aa16■□□□□ 0.15
SSNA1-204ENST00000464553 MGAT4DA6NG13 374 aa16■□□□□ 0.15
SSNA1-204ENST00000464553 MROH6A6NGR9 719 aa16■□□□□ 0.15
SSNA1-204ENST00000464553 CFAP99D6REC4 459 aa16■□□□□ 0.15
SSNA1-204ENST00000464553 E7EVH7 732 aa16■□□□□ 0.15
SSNA1-204ENST00000464553 VIPP01282 170 aa16■□□□□ 0.15
SSNA1-204ENST00000464553 IFNB1P01574 187 aa16■□□□□ 0.15
SSNA1-204ENST00000464553 FGGP02679 453 aa16■□□□□ 0.15
SSNA1-204ENST00000464553 MSNP26038 577 aaKnown RBP16■□□□□ 0.15
SSNA1-204ENST00000464553 HALP42357 657 aa16■□□□□ 0.15
SSNA1-204ENST00000464553 BCL7AQ4VC05 210 aa16■□□□□ 0.15
SSNA1-204ENST00000464553 TMEM164Q5U3C3 297 aa16■□□□□ 0.15
SSNA1-204ENST00000464553 METRNLQ641Q3 311 aa16■□□□□ 0.15
SSNA1-204ENST00000464553 CRTC3Q6UUV7 619 aa16■□□□□ 0.15
SSNA1-204ENST00000464553 ZNF574Q6ZN55 896 aaPredicted RBP16■□□□□ 0.15
SSNA1-204ENST00000464553 TMEM26Q6ZUK4 368 aa16■□□□□ 0.15
SSNA1-204ENST00000464553 DCUN1D1Q96GG9 259 aa16■□□□□ 0.15
SSNA1-204ENST00000464553 PBKQ96KB5 322 aa16■□□□□ 0.15
SSNA1-204ENST00000464553 RDH14Q9HBH5 336 aa16■□□□□ 0.15
SSNA1-204ENST00000464553 ETNK1Q9HBU6 452 aa16■□□□□ 0.15
SSNA1-204ENST00000464553 FKBPLQ9UIM3 349 aa16■□□□□ 0.15
SSNA1-204ENST00000464553 TTC7AQ9ULT0 858 aaPredicted RBP16■□□□□ 0.15
SSNA1-204ENST00000464553 SSUH2Q9Y2M2 353 aa16■□□□□ 0.15
SSNA1-204ENST00000464553 LOXL2Q9Y4K0 774 aa16■□□□□ 0.15
SSNA1-204ENST00000464553 KCTD3Q9Y597 815 aa16■□□□□ 0.15
SSNA1-204ENST00000464553 ACACAQ13085 2346 aa15.99■□□□□ 0.15
SSNA1-204ENST00000464553 C17orf113A0A1B0GUU1 675 aa15.99■□□□□ 0.15
SSNA1-204ENST00000464553 PDZK1P1A8MUH7 402 aa15.99■□□□□ 0.15
SSNA1-204ENST00000464553 CASC3O15234 703 aaKnown RBP15.99■□□□□ 0.15
SSNA1-204ENST00000464553 TOX3O15405 576 aaPredicted RBP15.99■□□□□ 0.15
SSNA1-204ENST00000464553 CD82P27701 267 aa15.99■□□□□ 0.15
SSNA1-204ENST00000464553 AKT1P31749 480 aa15.99■□□□□ 0.15
SSNA1-204ENST00000464553 SLC19A1P41440 591 aa15.99■□□□□ 0.15
SSNA1-204ENST00000464553 CDK16Q00536 496 aa15.99■□□□□ 0.15
SSNA1-204ENST00000464553 OLIG2Q13516 323 aa15.99■□□□□ 0.15
SSNA1-204ENST00000464553 PTPRCAPQ14761 206 aa15.99■□□□□ 0.15
SSNA1-204ENST00000464553 PHF19Q5T6S3 580 aa15.99■□□□□ 0.15
SSNA1-204ENST00000464553 ARMC3Q5W041 872 aa15.99■□□□□ 0.15
SSNA1-204ENST00000464553 PLXDC1Q8IUK5 500 aa15.99■□□□□ 0.15
SSNA1-204ENST00000464553 TRIM48Q8IWZ4 208 aa15.99■□□□□ 0.15
SSNA1-204ENST00000464553 NXPE1Q8N323 547 aa15.99■□□□□ 0.15
SSNA1-204ENST00000464553 DNAAF3Q8N9W5 541 aa15.99■□□□□ 0.15
SSNA1-204ENST00000464553 AGBL5Q8NDL9 886 aa15.99■□□□□ 0.15
SSNA1-204ENST00000464553 OR13C4Q8NGS5 318 aa15.99■□□□□ 0.15
SSNA1-204ENST00000464553 OR2L2Q8NH16 312 aa15.99■□□□□ 0.15
SSNA1-204ENST00000464553 HNRNPLLQ8WVV9 542 aaKnown RBP15.99■□□□□ 0.15
SSNA1-204ENST00000464553 CDKN2AIPNLQ96HQ2 116 aa15.99■□□□□ 0.15
SSNA1-204ENST00000464553 DCBLD2Q96PD2 775 aa15.99■□□□□ 0.15
SSNA1-204ENST00000464553 RANBP9Q96S59 729 aa15.99■□□□□ 0.15
SSNA1-204ENST00000464553 NAP1L3Q99457 506 aaPredicted RBP15.99■□□□□ 0.15
SSNA1-204ENST00000464553 COPS8Q99627 209 aa15.99■□□□□ 0.15
SSNA1-204ENST00000464553 NUDT22Q9BRQ3 303 aa15.99■□□□□ 0.15
SSNA1-204ENST00000464553 SEMA6CQ9H3T2 930 aa15.99■□□□□ 0.15
SSNA1-204ENST00000464553 EIF2B3Q9NR50 452 aaKnown RBP15.99■□□□□ 0.15
SSNA1-204ENST00000464553 ZNF624Q9P2J8 865 aaPredicted RBP15.99■□□□□ 0.15
SSNA1-204ENST00000464553 CRLS1Q9UJA2 301 aa15.99■□□□□ 0.15
SSNA1-204ENST00000464553 LHX6Q9UPM6 363 aa15.99■□□□□ 0.15
SSNA1-204ENST00000464553 IGLV3-16A0A075B6K0 115 aa15.98■□□□□ 0.15
SSNA1-204ENST00000464553 HEATR9A2RTY3 570 aa15.98■□□□□ 0.15
SSNA1-204ENST00000464553 QSOX1O00391 747 aa15.98■□□□□ 0.15
SSNA1-204ENST00000464553 CEP104O60308 925 aa15.98■□□□□ 0.15
SSNA1-204ENST00000464553 APC2O95996 2303 aa15.98■□□□□ 0.15
SSNA1-204ENST00000464553 THRAP10827 490 aa15.98■□□□□ 0.15
SSNA1-204ENST00000464553 BRAFP15056 766 aa15.98■□□□□ 0.15
SSNA1-204ENST00000464553 TPH1P17752 444 aa15.98■□□□□ 0.15
SSNA1-204ENST00000464553 ADRA1DP25100 572 aa15.98■□□□□ 0.15
SSNA1-204ENST00000464553 CSTF2P33240 577 aaKnown RBP eCLIP15.98■□□□□ 0.15
SSNA1-204ENST00000464553 LMAN1P49257 510 aa15.98■□□□□ 0.15
SSNA1-204ENST00000464553 CTSCP53634 463 aa15.98■□□□□ 0.15
SSNA1-204ENST00000464553 CACNG1Q06432 222 aa15.98■□□□□ 0.15
SSNA1-204ENST00000464553 SNX1Q13596 522 aa15.98■□□□□ 0.15
SSNA1-204ENST00000464553 BROXQ5VW32 411 aa15.98■□□□□ 0.15
SSNA1-204ENST00000464553 LYPLAL1Q5VWZ2 237 aa15.98■□□□□ 0.15
SSNA1-204ENST00000464553 TMPRSS9Q7Z410 1059 aa15.98■□□□□ 0.15
SSNA1-204ENST00000464553 ARHGAP22Q7Z5H3 698 aa15.98■□□□□ 0.15
SSNA1-204ENST00000464553 KCNE4Q8WWG9 221 aa15.98■□□□□ 0.15
SSNA1-204ENST00000464553 SGSM3Q96HU1 749 aa15.98■□□□□ 0.15
SSNA1-204ENST00000464553 TTC1Q99614 292 aa15.98■□□□□ 0.15
SSNA1-204ENST00000464553 CCM2Q9BSQ5 444 aa15.98■□□□□ 0.15
SSNA1-204ENST00000464553 RAB33BQ9H082 229 aa15.98■□□□□ 0.15
SSNA1-204ENST00000464553 VPS37BQ9H9H4 285 aa15.98■□□□□ 0.15
SSNA1-204ENST00000464553 SLC40A1Q9NP59 571 aa15.98■□□□□ 0.15
SSNA1-204ENST00000464553 RAB6BQ9NRW1 208 aa15.98■□□□□ 0.15
SSNA1-204ENST00000464553 ZDHHC3Q9NYG2 299 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms