RNA–Protein interactions for RNA: ENST00000464148.2

MRPL55-224, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-224ENST00000464148 MFSD11O43934 449 aa13.04□□□□□ -0.32
MRPL55-224ENST00000464148 CPNE3O75131 537 aaKnown RBP13.04□□□□□ -0.32
MRPL55-224ENST00000464148 SCRG1O75711 98 aa13.04□□□□□ -0.32
MRPL55-224ENST00000464148 LDLRP01130 860 aa13.04□□□□□ -0.32
MRPL55-224ENST00000464148 SLC4A1P02730 911 aa13.04□□□□□ -0.32
MRPL55-224ENST00000464148 BRAFP15056 766 aa13.04□□□□□ -0.32
MRPL55-224ENST00000464148 VCLP18206 1134 aa13.04□□□□□ -0.32
MRPL55-224ENST00000464148 LPOP22079 712 aaPredicted RBP13.04□□□□□ -0.32
MRPL55-224ENST00000464148 IL4RP24394 825 aa13.04□□□□□ -0.32
MRPL55-224ENST00000464148 TNFRSF8P28908 595 aa13.04□□□□□ -0.32
MRPL55-224ENST00000464148 HALP42357 657 aa13.04□□□□□ -0.32
MRPL55-224ENST00000464148 PPP1CAP62136 330 aa13.04□□□□□ -0.32
MRPL55-224ENST00000464148 NR6A1Q15406 480 aa13.04□□□□□ -0.32
MRPL55-224ENST00000464148 QPCTQ16769 361 aa13.04□□□□□ -0.32
MRPL55-224ENST00000464148 SLC6A19Q695T7 634 aa13.04□□□□□ -0.32
MRPL55-224ENST00000464148 KLHL35Q6PF15 583 aa13.04□□□□□ -0.32
MRPL55-224ENST00000464148 HPS6Q86YV9 775 aa13.04□□□□□ -0.32
MRPL55-224ENST00000464148 TICAM1Q8IUC6 712 aa13.04□□□□□ -0.32
MRPL55-224ENST00000464148 TMEM126BQ8IUX1 230 aa13.04□□□□□ -0.32
MRPL55-224ENST00000464148 SRRM1Q8IYB3 904 aaKnown RBP13.04□□□□□ -0.32
MRPL55-224ENST00000464148 TTC30BQ8N4P2 665 aa13.04□□□□□ -0.32
MRPL55-224ENST00000464148 RNF214Q8ND24 703 aa13.04□□□□□ -0.32
MRPL55-224ENST00000464148 FDCSPQ8NFU4 85 aa13.04□□□□□ -0.32
MRPL55-224ENST00000464148 ARRDC2Q8TBH0 407 aa13.04□□□□□ -0.32
MRPL55-224ENST00000464148 MAML1Q92585 1016 aa13.04□□□□□ -0.32
MRPL55-224ENST00000464148 GLYATL1Q969I3 302 aa13.04□□□□□ -0.32
MRPL55-224ENST00000464148 PNPLA2Q96AD5 504 aa13.04□□□□□ -0.32
MRPL55-224ENST00000464148 TCTN2Q96GX1 697 aa13.04□□□□□ -0.32
MRPL55-224ENST00000464148 ZNF514Q96K75 400 aaPredicted RBP13.04□□□□□ -0.32
MRPL55-224ENST00000464148 C5orf34Q96MH7 638 aa13.04□□□□□ -0.32
MRPL55-224ENST00000464148 ERGIC2Q96RQ1 377 aa13.04□□□□□ -0.32
MRPL55-224ENST00000464148 TIMM29Q9BSF4 260 aa13.04□□□□□ -0.32
MRPL55-224ENST00000464148 SYT11Q9BT88 431 aa13.04□□□□□ -0.32
MRPL55-224ENST00000464148 ZSCAN5AQ9BUG6 496 aa13.04□□□□□ -0.32
MRPL55-224ENST00000464148 ADGRE3Q9BY15 652 aa13.04□□□□□ -0.32
MRPL55-224ENST00000464148 RAB33BQ9H082 229 aa13.04□□□□□ -0.32
MRPL55-224ENST00000464148 ZFYVE1Q9HBF4 777 aa13.04□□□□□ -0.32
MRPL55-224ENST00000464148 WASH6PQ9NQA3 447 aa13.04□□□□□ -0.32
MRPL55-224ENST00000464148 DTLQ9NZJ0 730 aa13.04□□□□□ -0.32
MRPL55-224ENST00000464148 LIMA1Q9UHB6 759 aaKnown RBP13.04□□□□□ -0.32
MRPL55-224ENST00000464148 ANKRD17O75179 2603 aaKnown RBP13.04□□□□□ -0.32
MRPL55-224ENST00000464148 WIPF3A6NGB9 483 aa13.03□□□□□ -0.32
MRPL55-224ENST00000464148 VEGFDO43915 354 aa13.03□□□□□ -0.32
MRPL55-224ENST00000464148 CEACAM4O75871 244 aa13.03□□□□□ -0.32
MRPL55-224ENST00000464148 TMEM63AO94886 807 aa13.03□□□□□ -0.32
MRPL55-224ENST00000464148 CDK14O94921 469 aa13.03□□□□□ -0.32
MRPL55-224ENST00000464148 HLA-DQB2P05538 268 aa13.03□□□□□ -0.32
MRPL55-224ENST00000464148 KLK3P07288 261 aaPredicted RBP13.03□□□□□ -0.32
MRPL55-224ENST00000464148 GZMAP12544 262 aa13.03□□□□□ -0.32
MRPL55-224ENST00000464148 CDK11BP21127 795 aaKnown RBP13.03□□□□□ -0.32
MRPL55-224ENST00000464148 CCNCP24863 283 aa13.03□□□□□ -0.32
MRPL55-224ENST00000464148 NIPAL4Q0D2K0 466 aa13.03□□□□□ -0.32
MRPL55-224ENST00000464148 GALNT2Q10471 571 aa13.03□□□□□ -0.32
MRPL55-224ENST00000464148 MMRN1Q13201 1228 aa13.03□□□□□ -0.32
MRPL55-224ENST00000464148 GALNT3Q14435 633 aa13.03□□□□□ -0.32
MRPL55-224ENST00000464148 PLCL1Q15111 1095 aa13.03□□□□□ -0.32
MRPL55-224ENST00000464148 IFI16Q16666 785 aaKnown RBP13.03□□□□□ -0.32
MRPL55-224ENST00000464148 DNTTIP2Q5QJE6 756 aaKnown RBP13.03□□□□□ -0.32
MRPL55-224ENST00000464148 AGAP9Q5VTM2 703 aa13.03□□□□□ -0.32
MRPL55-224ENST00000464148 TXNRD3NBQ6F5E7 133 aa13.03□□□□□ -0.32
MRPL55-224ENST00000464148 WASH2PQ6VEQ5 465 aa13.03□□□□□ -0.32
MRPL55-224ENST00000464148 TRAM1L1Q8N609 369 aa13.03□□□□□ -0.32
MRPL55-224ENST00000464148 GPR26Q8NDV2 337 aa13.03□□□□□ -0.32
MRPL55-224ENST00000464148 TEKT4Q8WW24 435 aa13.03□□□□□ -0.32
MRPL55-224ENST00000464148 C19orf60Q96EN9 201 aa13.03□□□□□ -0.32
MRPL55-224ENST00000464148 TRIM11Q96F44 468 aa13.03□□□□□ -0.32
MRPL55-224ENST00000464148 PHF12Q96QT6 1004 aa13.03□□□□□ -0.32
MRPL55-224ENST00000464148 NUDT9Q9BW91 350 aa13.03□□□□□ -0.32
MRPL55-224ENST00000464148 CBX8Q9HC52 389 aa13.03□□□□□ -0.32
MRPL55-224ENST00000464148 RAD18Q9NS91 495 aa13.03□□□□□ -0.32
MRPL55-224ENST00000464148 SNX7Q9UNH6 387 aa13.03□□□□□ -0.32
MRPL55-224ENST00000464148 SRPK3Q9UPE1 567 aa13.03□□□□□ -0.32
MRPL55-224ENST00000464148 SLC5A6Q9Y289 635 aa13.03□□□□□ -0.32
MRPL55-224ENST00000464148 SSU72P8A0A1W2PR75 194 aa13.02□□□□□ -0.33
MRPL55-224ENST00000464148 UBA6A0AVT1 1052 aaPredicted RBP13.02□□□□□ -0.33
MRPL55-224ENST00000464148 MTX2O75431 263 aa13.02□□□□□ -0.33
MRPL55-224ENST00000464148 JCHAINP01591 159 aa13.02□□□□□ -0.33
MRPL55-224ENST00000464148 MYBL1P10243 752 aa13.02□□□□□ -0.33
MRPL55-224ENST00000464148 FECHP22830 423 aa13.02□□□□□ -0.33
MRPL55-224ENST00000464148 CD86P42081 329 aa13.02□□□□□ -0.33
MRPL55-224ENST00000464148 SSR1P43307 286 aaKnown RBP13.02□□□□□ -0.33
MRPL55-224ENST00000464148 HSD11B2P80365 405 aa13.02□□□□□ -0.33
MRPL55-224ENST00000464148 GPS2Q13227 327 aa13.02□□□□□ -0.33
MRPL55-224ENST00000464148 LAMB3Q13751 1172 aa13.02□□□□□ -0.33
MRPL55-224ENST00000464148 ELOAQ14241 798 aaKnown RBP13.02□□□□□ -0.33
MRPL55-224ENST00000464148 PIGHQ14442 188 aaPredicted RBP13.02□□□□□ -0.33
MRPL55-224ENST00000464148 IQCB1Q15051 598 aa13.02□□□□□ -0.33
MRPL55-224ENST00000464148 ASIC2Q16515 512 aa13.02□□□□□ -0.33
MRPL55-224ENST00000464148 IZUMO3Q5VZ72 239 aa13.02□□□□□ -0.33
MRPL55-224ENST00000464148 PDPK2PQ6A1A2 396 aa13.02□□□□□ -0.33
MRPL55-224ENST00000464148 CERS6Q6ZMG9 384 aa13.02□□□□□ -0.33
MRPL55-224ENST00000464148 KMT5CQ86Y97 462 aa13.02□□□□□ -0.33
MRPL55-224ENST00000464148 TRAPPC5Q8IUR0 188 aa13.02□□□□□ -0.33
MRPL55-224ENST00000464148 ZNF547Q8IVP9 402 aa13.02□□□□□ -0.33
MRPL55-224ENST00000464148 IQCKQ8N0W5 287 aa13.02□□□□□ -0.33
MRPL55-224ENST00000464148 RBMXL3Q8N7X1 1067 aaKnown RBP13.02□□□□□ -0.33
MRPL55-224ENST00000464148 ENDOVQ8N8Q3 282 aaKnown RBP13.02□□□□□ -0.33
MRPL55-224ENST00000464148 LRRN4Q8WUT4 740 aa13.02□□□□□ -0.33
MRPL55-224ENST00000464148 MAP3K3Q99759 626 aa13.02□□□□□ -0.33
MRPL55-224ENST00000464148 NUP85Q9BW27 656 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms