RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 TRIP6Q15654 476 aaKnown RBP18.66■□□□□ 0.58
LMNB1-204ENST00000463908 SMAD1Q15797 465 aaKnown RBP18.66■□□□□ 0.58
LMNB1-204ENST00000463908 GLE1Q53GS7 698 aaKnown RBP18.66■□□□□ 0.58
LMNB1-204ENST00000463908 C6orf132Q5T0Z8 1188 aa18.66■□□□□ 0.58
LMNB1-204ENST00000463908 SLC30A9Q6PML9 568 aa18.66■□□□□ 0.58
LMNB1-204ENST00000463908 UNC5BQ8IZJ1 945 aa18.66■□□□□ 0.58
LMNB1-204ENST00000463908 CLDN19Q8N6F1 224 aa18.66■□□□□ 0.58
LMNB1-204ENST00000463908 FAM46DQ8NEK8 389 aa18.66■□□□□ 0.58
LMNB1-204ENST00000463908 FBXO25Q8TCJ0 367 aa18.66■□□□□ 0.58
LMNB1-204ENST00000463908 APOLD1Q96LR9 279 aa18.66■□□□□ 0.58
LMNB1-204ENST00000463908 CNTNAP3BQ96NU0 1288 aa18.66■□□□□ 0.58
LMNB1-204ENST00000463908 DUSP23Q9BVJ7 150 aa18.66■□□□□ 0.58
LMNB1-204ENST00000463908 CNTNAP3Q9BZ76 1288 aa18.66■□□□□ 0.58
LMNB1-204ENST00000463908 EPB41L5Q9HCM4 733 aa18.66■□□□□ 0.58
LMNB1-204ENST00000463908 CATSPERZQ9NTU4 200 aa18.66■□□□□ 0.58
LMNB1-204ENST00000463908 TAAR2Q9P1P5 351 aa18.66■□□□□ 0.58
LMNB1-204ENST00000463908 GULP1Q9UBP9 304 aa18.66■□□□□ 0.58
LMNB1-204ENST00000463908 ZFHX4Q86UP3 3567 aa18.66■□□□□ 0.58
LMNB1-204ENST00000463908 LDOC1O95751 146 aaPredicted RBP18.65■□□□□ 0.58
LMNB1-204ENST00000463908 EML2O95834 649 aa18.65■□□□□ 0.58
LMNB1-204ENST00000463908 POLBP06746 335 aa18.65■□□□□ 0.58
LMNB1-204ENST00000463908 CEACAM1P13688 526 aa18.65■□□□□ 0.58
LMNB1-204ENST00000463908 PGAM1P18669 254 aa18.65■□□□□ 0.58
LMNB1-204ENST00000463908 ACTR1BP42025 376 aa18.65■□□□□ 0.58
LMNB1-204ENST00000463908 ACTR1AP61163 376 aa18.65■□□□□ 0.58
LMNB1-204ENST00000463908 PDIA2Q13087 525 aaKnown RBP18.65■□□□□ 0.58
LMNB1-204ENST00000463908 GTF2H3Q13889 308 aa18.65■□□□□ 0.58
LMNB1-204ENST00000463908 ITIH4Q14624 930 aa18.65■□□□□ 0.58
LMNB1-204ENST00000463908 FASTKD3Q14CZ7 662 aaKnown RBP18.65■□□□□ 0.58
LMNB1-204ENST00000463908 INAVAQ3KP66 663 aa18.65■□□□□ 0.58
LMNB1-204ENST00000463908 NEPROQ6NW34 567 aa18.65■□□□□ 0.58
LMNB1-204ENST00000463908 XKR5Q6UX68 686 aa18.65■□□□□ 0.58
LMNB1-204ENST00000463908 CERS6Q6ZMG9 384 aa18.65■□□□□ 0.58
LMNB1-204ENST00000463908 TRAPPC5Q8IUR0 188 aa18.65■□□□□ 0.58
LMNB1-204ENST00000463908 GPR150Q8NGU9 434 aa18.65■□□□□ 0.58
LMNB1-204ENST00000463908 HEXDCQ8WVB3 486 aa18.65■□□□□ 0.58
LMNB1-204ENST00000463908 DCUN1D1Q96GG9 259 aa18.65■□□□□ 0.58
LMNB1-204ENST00000463908 CNDP2Q96KP4 475 aaKnown RBP18.65■□□□□ 0.58
LMNB1-204ENST00000463908 CDC6Q99741 560 aa18.65■□□□□ 0.58
LMNB1-204ENST00000463908 ZCCHC2Q9C0B9 1178 aaKnown RBP18.65■□□□□ 0.58
LMNB1-204ENST00000463908 SLC32A1Q9H598 525 aa18.65■□□□□ 0.58
LMNB1-204ENST00000463908 KLC4Q9NSK0 619 aa18.65■□□□□ 0.58
LMNB1-204ENST00000463908 ZDHHC18Q9NUE0 388 aa18.65■□□□□ 0.58
LMNB1-204ENST00000463908 DOLKQ9UPQ8 538 aa18.65■□□□□ 0.58
LMNB1-204ENST00000463908 KCNK6Q9Y257 313 aa18.65■□□□□ 0.58
LMNB1-204ENST00000463908 DNMT3AQ9Y6K1 912 aaPredicted RBP18.65■□□□□ 0.58
LMNB1-204ENST00000463908 ARID1BQ8NFD5 2236 aaPredicted RBP18.65■□□□□ 0.58
LMNB1-204ENST00000463908 SPAARA0A1B0GVQ0 90 aa18.64■□□□□ 0.57
LMNB1-204ENST00000463908 NOBOXO60393 691 aa18.64■□□□□ 0.57
LMNB1-204ENST00000463908 KRT37O76014 449 aa18.64■□□□□ 0.57
LMNB1-204ENST00000463908 ALPPL2P10696 532 aa18.64■□□□□ 0.57
LMNB1-204ENST00000463908 CLCNKAP51800 687 aa18.64■□□□□ 0.57
LMNB1-204ENST00000463908 CAV1Q03135 178 aa18.64■□□□□ 0.57
LMNB1-204ENST00000463908 DNAJC3Q13217 504 aa18.64■□□□□ 0.57
LMNB1-204ENST00000463908 CRYMQ14894 314 aa18.64■□□□□ 0.57
LMNB1-204ENST00000463908 PLA2G4EQ3MJ16 856 aa18.64■□□□□ 0.57
LMNB1-204ENST00000463908 BCL7AQ4VC05 210 aa18.64■□□□□ 0.57
LMNB1-204ENST00000463908 DNTTIP2Q5QJE6 756 aaKnown RBP18.64■□□□□ 0.57
LMNB1-204ENST00000463908 LYPLAL1Q5VWZ2 237 aa18.64■□□□□ 0.57
LMNB1-204ENST00000463908 ZCCHC8Q6NZY4 707 aaKnown RBP18.64■□□□□ 0.57
LMNB1-204ENST00000463908 UNC5AQ6ZN44 842 aa18.64■□□□□ 0.57
LMNB1-204ENST00000463908 GLRX5Q86SX6 157 aa18.64■□□□□ 0.57
LMNB1-204ENST00000463908 ANKMY2Q8IV38 441 aa18.64■□□□□ 0.57
LMNB1-204ENST00000463908 SLC35F3Q8IY50 421 aa18.64■□□□□ 0.57
LMNB1-204ENST00000463908 GPR156Q8NFN8 814 aa18.64■□□□□ 0.57
LMNB1-204ENST00000463908 SCG3Q8WXD2 468 aaKnown RBP18.64■□□□□ 0.57
LMNB1-204ENST00000463908 LRRC39Q96DD0 335 aa18.64■□□□□ 0.57
LMNB1-204ENST00000463908 ZNF514Q96K75 400 aaPredicted RBP18.64■□□□□ 0.57
LMNB1-204ENST00000463908 TIMM29Q9BSF4 260 aa18.64■□□□□ 0.57
LMNB1-204ENST00000463908 NAT9Q9BTE0 207 aa18.64■□□□□ 0.57
LMNB1-204ENST00000463908 DPEP2Q9H4A9 486 aa18.64■□□□□ 0.57
LMNB1-204ENST00000463908 TOR4AQ9NXH8 423 aa18.64■□□□□ 0.57
LMNB1-204ENST00000463908 TBC1D29Q9UFV1 150 aa18.64■□□□□ 0.57
LMNB1-204ENST00000463908 CHMP2BQ9UQN3 213 aa18.64■□□□□ 0.57
LMNB1-204ENST00000463908 CHD8Q9HCK8 2581 aa18.64■□□□□ 0.57
LMNB1-204ENST00000463908 CFAP99D6REC4 459 aa18.63■□□□□ 0.57
LMNB1-204ENST00000463908 TNFSF14O43557 240 aa18.63■□□□□ 0.57
LMNB1-204ENST00000463908 RALBP11234 206 aa18.63■□□□□ 0.57
LMNB1-204ENST00000463908 CKMT1AP12532 417 aa18.63■□□□□ 0.57
LMNB1-204ENST00000463908 PAMP19021 973 aa18.63■□□□□ 0.57
LMNB1-204ENST00000463908 NSG1P42857 185 aa18.63■□□□□ 0.57
LMNB1-204ENST00000463908 NOVA1P51513 510 aaKnown RBP18.63■□□□□ 0.57
LMNB1-204ENST00000463908 LONRF1Q17RB8 773 aa18.63■□□□□ 0.57
LMNB1-204ENST00000463908 SPANXN3Q5MJ09 141 aa18.63■□□□□ 0.57
LMNB1-204ENST00000463908 PACS1Q6VY07 963 aa18.63■□□□□ 0.57
LMNB1-204ENST00000463908 FAM83HQ6ZRV2 1179 aaPredicted RBP18.63■□□□□ 0.57
LMNB1-204ENST00000463908 CENPUQ71F23 418 aa18.63■□□□□ 0.57
LMNB1-204ENST00000463908 C17orf82Q86X59 251 aaPredicted RBP18.63■□□□□ 0.57
LMNB1-204ENST00000463908 CCNJLQ8IV13 435 aa18.63■□□□□ 0.57
LMNB1-204ENST00000463908 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.63■□□□□ 0.575e-8■■■■■ 60.8
LMNB1-204ENST00000463908 FBXO36Q8NEA4 188 aa18.63■□□□□ 0.57
LMNB1-204ENST00000463908 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.63■□□□□ 0.577e-6■■■■■ 27.5
LMNB1-204ENST00000463908 LINC00615Q96LM1 132 aaPredicted RBP18.63■□□□□ 0.57
LMNB1-204ENST00000463908 C20orf96Q9NUD7 363 aaPredicted RBP18.63■□□□□ 0.57
LMNB1-204ENST00000463908 SIRPGQ9P1W8 387 aa18.63■□□□□ 0.57
LMNB1-204ENST00000463908 FTSJ1Q9UET6 329 aa18.63■□□□□ 0.57
LMNB1-204ENST00000463908 ZC3H7BQ9UGR2 993 aaKnown RBP18.63■□□□□ 0.57
LMNB1-204ENST00000463908 DNAJC16Q9Y2G8 782 aa18.63■□□□□ 0.57
LMNB1-204ENST00000463908 A6NCN8 305 aa18.62■□□□□ 0.57
LMNB1-204ENST00000463908 AP2A2O94973 939 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms