RNA–Protein interactions for RNA: ENST00000463369.5

SHQ1-203, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2 BASIC

Gene SHQ1, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-203ENST00000463369 RTN4RL1Q86UN2 441 aaPredicted RBP8.63□□□□□ -1.03
SHQ1-203ENST00000463369 AKAP14Q86UN6 197 aa8.63□□□□□ -1.03
SHQ1-203ENST00000463369 PTRH1Q86Y79 214 aaKnown RBP8.63□□□□□ -1.03
SHQ1-203ENST00000463369 SNX29P2Q8IUI4 249 aa8.63□□□□□ -1.03
SHQ1-203ENST00000463369 PQLC3Q8N755 202 aa8.63□□□□□ -1.03
SHQ1-203ENST00000463369 C1orf162Q8NEQ5 155 aaPredicted RBP8.63□□□□□ -1.03
SHQ1-203ENST00000463369 ZUFSPQ96AP4 578 aa8.63□□□□□ -1.03
SHQ1-203ENST00000463369 MOCOSQ96EN8 888 aa8.63□□□□□ -1.03
SHQ1-203ENST00000463369 PEBP4Q96S96 227 aa8.63□□□□□ -1.03
SHQ1-203ENST00000463369 YME1L1Q96TA2 773 aa8.63□□□□□ -1.03
SHQ1-203ENST00000463369 LHPPQ9H008 270 aa8.63□□□□□ -1.03
SHQ1-203ENST00000463369 RGS18Q9NS28 235 aa8.63□□□□□ -1.03
SHQ1-203ENST00000463369 CACNA2D2Q9NY47 1150 aa8.63□□□□□ -1.03
SHQ1-203ENST00000463369 TJP2Q9UDY2 1190 aa8.63□□□□□ -1.03
SHQ1-203ENST00000463369 A0A1W2PQ67 120 aa8.62□□□□□ -1.03
SHQ1-203ENST00000463369 KIAA0355O15063 1070 aa8.62□□□□□ -1.03
SHQ1-203ENST00000463369 HOXC11O43248 304 aaPredicted RBP8.62□□□□□ -1.03
SHQ1-203ENST00000463369 SYNCRIPO60506 623 aaKnown RBP8.62□□□□□ -1.03
SHQ1-203ENST00000463369 RECQL4O94761 1208 aa8.62□□□□□ -1.03
SHQ1-203ENST00000463369 GOSR1O95249 250 aa8.62□□□□□ -1.03
SHQ1-203ENST00000463369 PAPLNO95428 1278 aa8.62□□□□□ -1.03
SHQ1-203ENST00000463369 TIMP1P01033 207 aa8.62□□□□□ -1.03
SHQ1-203ENST00000463369 JUNP05412 331 aaKnown RBP8.62□□□□□ -1.03
SHQ1-203ENST00000463369 THEGLP0DJG4 465 aa8.62□□□□□ -1.03
SHQ1-203ENST00000463369 TGM2P21980 687 aa8.62□□□□□ -1.03
SHQ1-203ENST00000463369 AKAP5P24588 427 aa8.62□□□□□ -1.03
SHQ1-203ENST00000463369 GP5P40197 560 aa8.62□□□□□ -1.03
SHQ1-203ENST00000463369 NR4A2P43354 598 aa8.62□□□□□ -1.03
SHQ1-203ENST00000463369 CCL23P55773 120 aa8.62□□□□□ -1.03
SHQ1-203ENST00000463369 IL1RL1Q01638 556 aa8.62□□□□□ -1.03
SHQ1-203ENST00000463369 AQP6Q13520 282 aa8.62□□□□□ -1.03
SHQ1-203ENST00000463369 DUOXA2Q1HG44 320 aa8.62□□□□□ -1.03
SHQ1-203ENST00000463369 BROXQ5VW32 411 aa8.62□□□□□ -1.03
SHQ1-203ENST00000463369 SLX4IPQ5VYV7 408 aa8.62□□□□□ -1.03
SHQ1-203ENST00000463369 LRRC8EQ6NSJ5 796 aa8.62□□□□□ -1.03
SHQ1-203ENST00000463369 DENND1BQ6P3S1 775 aa8.62□□□□□ -1.03
SHQ1-203ENST00000463369 CASC4Q6P4E1 433 aa8.62□□□□□ -1.03
SHQ1-203ENST00000463369 AGMOQ6ZNB7 445 aa8.62□□□□□ -1.03
SHQ1-203ENST00000463369 PIWIL3Q7Z3Z3 882 aaKnown RBP8.62□□□□□ -1.03
SHQ1-203ENST00000463369 SLC22A16Q86VW1 577 aa8.62□□□□□ -1.03
SHQ1-203ENST00000463369 DCP2Q8IU60 420 aaKnown RBP8.62□□□□□ -1.03
SHQ1-203ENST00000463369 CLIP4Q8N3C7 705 aa8.62□□□□□ -1.03
SHQ1-203ENST00000463369 SFRP1Q8N474 314 aa8.62□□□□□ -1.03
SHQ1-203ENST00000463369 DCLK2Q8N568 766 aa8.62□□□□□ -1.03
SHQ1-203ENST00000463369 DBF4BQ8NFT6 615 aa8.62□□□□□ -1.03
SHQ1-203ENST00000463369 OR5B17Q8NGF7 314 aa8.62□□□□□ -1.03
SHQ1-203ENST00000463369 TFAP2BQ92481 460 aa8.62□□□□□ -1.03
SHQ1-203ENST00000463369 FKBP10Q96AY3 582 aa8.62□□□□□ -1.03
SHQ1-203ENST00000463369 CENPNQ96H22 339 aaPredicted RBP8.62□□□□□ -1.03
SHQ1-203ENST00000463369 MS4A3Q96HJ5 214 aa8.62□□□□□ -1.03
SHQ1-203ENST00000463369 SCLYQ96I15 445 aa8.62□□□□□ -1.03
SHQ1-203ENST00000463369 SLC45A3Q96JT2 553 aa8.62□□□□□ -1.03
SHQ1-203ENST00000463369 NMRAL1Q9HBL8 299 aa8.62□□□□□ -1.03
SHQ1-203ENST00000463369 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.62□□□□□ -1.03
SHQ1-203ENST00000463369 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.62□□□□□ -1.03
SHQ1-203ENST00000463369 TXNDC16Q9P2K2 825 aa8.62□□□□□ -1.03
SHQ1-203ENST00000463369 GRHPRQ9UBQ7 328 aa8.62□□□□□ -1.03
SHQ1-203ENST00000463369 TBC1D29Q9UFV1 150 aa8.62□□□□□ -1.03
SHQ1-203ENST00000463369 ADAM28Q9UKQ2 775 aa8.62□□□□□ -1.03
SHQ1-203ENST00000463369 DERAQ9Y315 318 aa8.62□□□□□ -1.03
SHQ1-203ENST00000463369 A0A1W2PPH5 198 aa8.61□□□□□ -1.03
SHQ1-203ENST00000463369 FAM149AA5PLN7 773 aa8.61□□□□□ -1.03
SHQ1-203ENST00000463369 MPOP05164 745 aa8.61□□□□□ -1.03
SHQ1-203ENST00000463369 MLNP12872 115 aa8.61□□□□□ -1.03
SHQ1-203ENST00000463369 PCSK2P16519 638 aa8.61□□□□□ -1.03
SHQ1-203ENST00000463369 IL10P22301 178 aa8.61□□□□□ -1.03
SHQ1-203ENST00000463369 EEF1B2P24534 225 aaKnown RBP8.61□□□□□ -1.03
SHQ1-203ENST00000463369 CXCR2P25025 360 aa8.61□□□□□ -1.03
SHQ1-203ENST00000463369 FASP25445 335 aa8.61□□□□□ -1.03
SHQ1-203ENST00000463369 RFC2P35250 354 aa8.61□□□□□ -1.03
SHQ1-203ENST00000463369 CCR10P46092 362 aa8.61□□□□□ -1.03
SHQ1-203ENST00000463369 GRIA4P48058 902 aa8.61□□□□□ -1.03
SHQ1-203ENST00000463369 ARCN1P48444 511 aaKnown RBP8.61□□□□□ -1.03
SHQ1-203ENST00000463369 NKX2-5P52952 324 aaPredicted RBP8.61□□□□□ -1.03
SHQ1-203ENST00000463369 PLA2G16P53816 162 aa8.61□□□□□ -1.03
SHQ1-203ENST00000463369 BCAR1P56945 870 aa8.61□□□□□ -1.03
SHQ1-203ENST00000463369 YWHAEP62258 255 aaKnown RBP8.61□□□□□ -1.03
SHQ1-203ENST00000463369 CRADDP78560 199 aa8.61□□□□□ -1.03
SHQ1-203ENST00000463369 FAM189BP81408 668 aa8.61□□□□□ -1.03
SHQ1-203ENST00000463369 SMAD4Q13485 552 aaKnown RBP8.61□□□□□ -1.03
SHQ1-203ENST00000463369 ZBTB6Q15916 424 aa8.61□□□□□ -1.03
SHQ1-203ENST00000463369 LRIT3Q3SXY7 679 aa8.61□□□□□ -1.03
SHQ1-203ENST00000463369 ANKRD39Q53RE8 183 aa8.61□□□□□ -1.03
SHQ1-203ENST00000463369 TMTC4Q5T4D3 741 aa8.61□□□□□ -1.03
SHQ1-203ENST00000463369 SH3PXD2AQ5TCZ1 1133 aa8.61□□□□□ -1.03
SHQ1-203ENST00000463369 LIPMQ5VYY2 423 aa8.61□□□□□ -1.03
SHQ1-203ENST00000463369 REP15Q6BDI9 236 aa8.61□□□□□ -1.03
SHQ1-203ENST00000463369 SIGIRRQ6IA17 410 aa8.61□□□□□ -1.03
SHQ1-203ENST00000463369 JADE1Q6IE81 842 aa8.61□□□□□ -1.03
SHQ1-203ENST00000463369 C8orf82Q6P1X6 216 aaPredicted RBP8.61□□□□□ -1.03
SHQ1-203ENST00000463369 CRTC3Q6UUV7 619 aa8.61□□□□□ -1.03
SHQ1-203ENST00000463369 CYP4V2Q6ZWL3 525 aaPredicted RBP8.61□□□□□ -1.03
SHQ1-203ENST00000463369 SLC24A5Q71RS6 500 aa8.61□□□□□ -1.03
SHQ1-203ENST00000463369 CLEC14AQ86T13 490 aa8.61□□□□□ -1.03
SHQ1-203ENST00000463369 ARMC8Q8IUR7 673 aa8.61□□□□□ -1.03
SHQ1-203ENST00000463369 HACE1Q8IYU2 909 aa8.61□□□□□ -1.03
SHQ1-203ENST00000463369 ZFP90Q8TF47 636 aa8.61□□□□□ -1.03
SHQ1-203ENST00000463369 LINC01599Q8WXQ3 324 aa8.61□□□□□ -1.03
SHQ1-203ENST00000463369 TRIM43Q96BQ3 446 aaPredicted RBP8.61□□□□□ -1.03
SHQ1-203ENST00000463369 MAGED4Q96JG8 741 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms