RNA–Protein interactions for RNA: ENST00000462968.2

CD46-210, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 473 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-210ENST00000462968 USP25Q9UHP3 1055 aa2.87□□□□□ -1.95
CD46-210ENST00000462968 SLCO3A1Q9UIG8 710 aa2.87□□□□□ -1.95
CD46-210ENST00000462968 SIX4Q9UIU6 781 aa2.87□□□□□ -1.95
CD46-210ENST00000462968 RASAL2Q9UJF2 1139 aa2.87□□□□□ -1.95
CD46-210ENST00000462968 STOML2Q9UJZ1 356 aa2.87□□□□□ -1.95
CD46-210ENST00000462968 AGO2Q9UKV8 859 aaKnown RBP2.87□□□□□ -1.95
CD46-210ENST00000462968 SARDHQ9UL12 918 aa2.87□□□□□ -1.95
CD46-210ENST00000462968 PCDHGA6Q9Y5G7 932 aa2.87□□□□□ -1.95
CD46-210ENST00000462968 STYXL1Q9Y6J8 313 aa2.87□□□□□ -1.95
CD46-210ENST00000462968 COL27A1Q8IZC6 1860 aaPredicted RBP2.87□□□□□ -1.95
CD46-210ENST00000462968 RP1L1Q8IWN7 2480 aaPredicted RBP2.86□□□□□ -1.95
CD46-210ENST00000462968 MYO18AQ92614 2054 aaKnown RBP2.86□□□□□ -1.95
CD46-210ENST00000462968 CSPG4Q6UVK1 2322 aa2.86□□□□□ -1.95
CD46-210ENST00000462968 COL6A5A8TX70 2615 aa2.86□□□□□ -1.95
CD46-210ENST00000462968 UNC119BA6NIH7 251 aa2.86□□□□□ -1.95
CD46-210ENST00000462968 ARGFXA6NJG6 315 aa2.86□□□□□ -1.95
CD46-210ENST00000462968 E9PMD0 336 aa2.86□□□□□ -1.95
CD46-210ENST00000462968 TOR1BO14657 336 aa2.86□□□□□ -1.95
CD46-210ENST00000462968 CPLX1O14810 134 aa2.86□□□□□ -1.95
CD46-210ENST00000462968 MCF2LO15068 1137 aa2.86□□□□□ -1.95
CD46-210ENST00000462968 ALOX15BO15296 676 aa2.86□□□□□ -1.95
CD46-210ENST00000462968 RAD51BO15315 384 aa2.86□□□□□ -1.95
CD46-210ENST00000462968 IRAK2O43187 625 aa2.86□□□□□ -1.95
CD46-210ENST00000462968 B4GAT1O43505 415 aa2.86□□□□□ -1.95
CD46-210ENST00000462968 TBL1XO60907 577 aa2.86□□□□□ -1.95
CD46-210ENST00000462968 DNAJC6O75061 913 aa2.86□□□□□ -1.95
CD46-210ENST00000462968 PROP1O75360 226 aa2.86□□□□□ -1.95
CD46-210ENST00000462968 BEST1O76090 585 aa2.86□□□□□ -1.95
CD46-210ENST00000462968 LATS1O95835 1130 aa2.86□□□□□ -1.95
CD46-210ENST00000462968 PRLP01236 227 aa2.86□□□□□ -1.95
CD46-210ENST00000462968 TMEM191BP0C7N4 346 aa2.86□□□□□ -1.95
CD46-210ENST00000462968 THRAP10827 490 aa2.86□□□□□ -1.95
CD46-210ENST00000462968 ZNF18P17022 549 aa2.86□□□□□ -1.95
CD46-210ENST00000462968 AGAP20933 346 aa2.86□□□□□ -1.95
CD46-210ENST00000462968 CD1CP29017 333 aa2.86□□□□□ -1.95
CD46-210ENST00000462968 PCSK6P29122 969 aa2.86□□□□□ -1.95
CD46-210ENST00000462968 ALDH4A1P30038 563 aa2.86□□□□□ -1.95
CD46-210ENST00000462968 HNRNPH3P31942 346 aaKnown RBP2.86□□□□□ -1.95
CD46-210ENST00000462968 VAMP7P51809 220 aa2.86□□□□□ -1.95
CD46-210ENST00000462968 HK3P52790 923 aa2.86□□□□□ -1.95
CD46-210ENST00000462968 MAP3K7CLP57077 242 aa2.86□□□□□ -1.95
CD46-210ENST00000462968 YPEL5P62699 121 aa2.86□□□□□ -1.95
CD46-210ENST00000462968 GUCY1A3Q02108 690 aa2.86□□□□□ -1.95
CD46-210ENST00000462968 NUCB1Q02818 461 aa2.86□□□□□ -1.95
CD46-210ENST00000462968 FOLH1Q04609 750 aa2.86□□□□□ -1.95
CD46-210ENST00000462968 RUNX1T1Q06455 604 aa2.86□□□□□ -1.95
CD46-210ENST00000462968 SRSF4Q08170 494 aaKnown RBP2.86□□□□□ -1.95
CD46-210ENST00000462968 CHAF1BQ13112 559 aa2.86□□□□□ -1.95
CD46-210ENST00000462968 SGCGQ13326 291 aa2.86□□□□□ -1.95
CD46-210ENST00000462968 SQSTM1Q13501 440 aa2.86□□□□□ -1.95
CD46-210ENST00000462968 TP53BP2Q13625 1128 aa2.86□□□□□ -1.95
CD46-210ENST00000462968 HLTFQ14527 1009 aaKnown RBP eCLIP2.86□□□□□ -1.95
CD46-210ENST00000462968 KRT32Q14532 448 aa2.86□□□□□ -1.95
CD46-210ENST00000462968 ZNF169Q14929 603 aaPredicted RBP2.86□□□□□ -1.95
CD46-210ENST00000462968 POSTNQ15063 836 aa2.86□□□□□ -1.95
CD46-210ENST00000462968 UGT8Q16880 541 aa2.86□□□□□ -1.95
CD46-210ENST00000462968 KLHL22Q53GT1 634 aa2.86□□□□□ -1.95
CD46-210ENST00000462968 PITRM1Q5JRX3 1037 aa2.86□□□□□ -1.95
CD46-210ENST00000462968 DCAF10Q5QP82 559 aa2.86□□□□□ -1.95
CD46-210ENST00000462968 SEL1L3Q68CR1 1132 aa2.86□□□□□ -1.95
CD46-210ENST00000462968 KIAA1161Q6NSJ0 714 aa2.86□□□□□ -1.95
CD46-210ENST00000462968 SLC39A4Q6P5W5 647 aa2.86□□□□□ -1.95
CD46-210ENST00000462968 DOK3Q7L591 496 aa2.86□□□□□ -1.95
CD46-210ENST00000462968 ZSCAN30Q86W11 494 aa2.86□□□□□ -1.95
CD46-210ENST00000462968 SFR1Q86XK3 245 aa2.86□□□□□ -1.95
CD46-210ENST00000462968 CCDC117Q8IWD4 279 aaPredicted RBP2.86□□□□□ -1.95
CD46-210ENST00000462968 FBXL16Q8N461 479 aa2.86□□□□□ -1.95
CD46-210ENST00000462968 CELF2-AS1Q8N7Q2 184 aa2.86□□□□□ -1.95
CD46-210ENST00000462968 SYT2Q8N9I0 419 aaPredicted RBP2.86□□□□□ -1.95
CD46-210ENST00000462968 CPEB3Q8NE35 698 aaKnown RBP2.86□□□□□ -1.95
CD46-210ENST00000462968 ZMIZ2Q8NF64 920 aa2.86□□□□□ -1.95
CD46-210ENST00000462968 FDCSPQ8NFU4 85 aa2.86□□□□□ -1.95
CD46-210ENST00000462968 WFDC5Q8TCV5 224 aa2.86□□□□□ -1.95
CD46-210ENST00000462968 TMEM158Q8WZ71 300 aa2.86□□□□□ -1.95
CD46-210ENST00000462968 MTFMTQ96DP5 389 aaKnown RBP2.86□□□□□ -1.95
CD46-210ENST00000462968 TNIP3Q96KP6 325 aa2.86□□□□□ -1.95
CD46-210ENST00000462968 AIFM3Q96NN9 605 aa2.86□□□□□ -1.95
CD46-210ENST00000462968 AGAP3Q96P47 875 aa2.86□□□□□ -1.95
CD46-210ENST00000462968 KLF6Q99612 283 aaPredicted RBP2.86□□□□□ -1.95
CD46-210ENST00000462968 SMAD5Q99717 465 aaKnown RBP2.86□□□□□ -1.95
CD46-210ENST00000462968 SMOQ99835 787 aa2.86□□□□□ -1.95
CD46-210ENST00000462968 CTRCQ99895 268 aa2.86□□□□□ -1.95
CD46-210ENST00000462968 NUDT22Q9BRQ3 303 aa2.86□□□□□ -1.95
CD46-210ENST00000462968 TEX101Q9BY14 249 aa2.86□□□□□ -1.95
CD46-210ENST00000462968 EDEM3Q9BZQ6 932 aa2.86□□□□□ -1.95
CD46-210ENST00000462968 LSG1Q9H089 658 aaKnown RBP2.86□□□□□ -1.95
CD46-210ENST00000462968 ILKAPQ9H0C8 392 aaPredicted RBP2.86□□□□□ -1.95
CD46-210ENST00000462968 TMEM60Q9H2L4 133 aa2.86□□□□□ -1.95
CD46-210ENST00000462968 ACBD3Q9H3P7 528 aa2.86□□□□□ -1.95
CD46-210ENST00000462968 NCOA5Q9HCD5 579 aaKnown RBP2.86□□□□□ -1.95
CD46-210ENST00000462968 DYRK4Q9NR20 520 aa2.86□□□□□ -1.95
CD46-210ENST00000462968 FBXO8Q9NRD0 319 aa2.86□□□□□ -1.95
CD46-210ENST00000462968 CCM2LQ9NUG4 571 aaPredicted RBP2.86□□□□□ -1.95
CD46-210ENST00000462968 KCND2Q9NZV8 630 aa2.86□□□□□ -1.95
CD46-210ENST00000462968 C5AR2Q9P296 337 aa2.86□□□□□ -1.95
CD46-210ENST00000462968 ADAM21Q9UKJ8 722 aa2.86□□□□□ -1.95
CD46-210ENST00000462968 INTS6Q9UL03 887 aaKnown RBP2.86□□□□□ -1.95
CD46-210ENST00000462968 PNMA8BQ9ULN7 279 aaPredicted RBP2.86□□□□□ -1.95
CD46-210ENST00000462968 KIF3AQ9Y496 699 aa2.86□□□□□ -1.95
CD46-210ENST00000462968 CEP83Q9Y592 693 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms