RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 ZNF140P52738 457 aaPredicted RBP10.01□□□□□ -0.81
SF3A3-204ENST00000462258 CTSCP53634 463 aa10.01□□□□□ -0.81
SF3A3-204ENST00000462258 DRG2P55039 364 aaKnown RBP10.01□□□□□ -0.81
SF3A3-204ENST00000462258 GDF10P55107 478 aa10.01□□□□□ -0.81
SF3A3-204ENST00000462258 CFHR1Q03591 330 aa10.01□□□□□ -0.81
SF3A3-204ENST00000462258 P3H1Q32P28 736 aa10.01□□□□□ -0.81
SF3A3-204ENST00000462258 SOWAHCQ53LP3 525 aaPredicted RBP10.01□□□□□ -0.81
SF3A3-204ENST00000462258 SEL1L2Q5TEA6 688 aa10.01□□□□□ -0.81
SF3A3-204ENST00000462258 ARHGAP40Q5TG30 622 aa10.01□□□□□ -0.81
SF3A3-204ENST00000462258 TMEM71Q6P5X7 295 aa10.01□□□□□ -0.81
SF3A3-204ENST00000462258 RANBP10Q6VN20 620 aa10.01□□□□□ -0.81
SF3A3-204ENST00000462258 KLHDC8BQ8IXV7 354 aa10.01□□□□□ -0.81
SF3A3-204ENST00000462258 RNF10Q8N5U6 811 aaKnown RBP10.01□□□□□ -0.81
SF3A3-204ENST00000462258 FAM71DQ8N9W8 422 aa10.01□□□□□ -0.81
SF3A3-204ENST00000462258 AGBL5Q8NDL9 886 aa10.01□□□□□ -0.81
SF3A3-204ENST00000462258 CCDC112Q8NEF3 446 aa10.01□□□□□ -0.81
SF3A3-204ENST00000462258 OR4K2Q8NGD2 314 aa10.01□□□□□ -0.81
SF3A3-204ENST00000462258 USP7Q93009 1102 aa10.01□□□□□ -0.81
SF3A3-204ENST00000462258 TBC1D10AQ9BXI6 508 aa10.01□□□□□ -0.81
SF3A3-204ENST00000462258 EPB41L1Q9H4G0 881 aa10.01□□□□□ -0.81
SF3A3-204ENST00000462258 UGT1A7Q9HAW7 530 aa10.01□□□□□ -0.81
SF3A3-204ENST00000462258 UGT1A10Q9HAW8 530 aa10.01□□□□□ -0.81
SF3A3-204ENST00000462258 UGT1A8Q9HAW9 530 aa10.01□□□□□ -0.81
SF3A3-204ENST00000462258 POT1Q9NUX5 634 aa10.01□□□□□ -0.81
SF3A3-204ENST00000462258 SCHIP1Q9P0W5 487 aaPredicted RBP10.01□□□□□ -0.81
SF3A3-204ENST00000462258 FEZ2Q9UHY8 353 aaPredicted RBP10.01□□□□□ -0.81
SF3A3-204ENST00000462258 FKBPLQ9UIM3 349 aa10.01□□□□□ -0.81
SF3A3-204ENST00000462258 GUCA1BQ9UMX6 200 aa10.01□□□□□ -0.81
SF3A3-204ENST00000462258 MN1Q10571 1320 aaPredicted RBP10.01□□□□□ -0.81
SF3A3-204ENST00000462258 TCRBV7S2A1N4TA0A589 114 aa10□□□□□ -0.81
SF3A3-204ENST00000462258 OR52A4PA6NMU1 304 aa10□□□□□ -0.81
SF3A3-204ENST00000462258 SRP72O76094 671 aaKnown RBP10□□□□□ -0.81
SF3A3-204ENST00000462258 CRTAMO95727 393 aa10□□□□□ -0.81
SF3A3-204ENST00000462258 VIPP01282 170 aa10□□□□□ -0.81
SF3A3-204ENST00000462258 BRAFP15056 766 aa10□□□□□ -0.81
SF3A3-204ENST00000462258 MSH3P20585 1137 aa10□□□□□ -0.81
SF3A3-204ENST00000462258 IDSP22304 550 aa10□□□□□ -0.81
SF3A3-204ENST00000462258 RPL10P27635 214 aaKnown RBP10□□□□□ -0.81
SF3A3-204ENST00000462258 CD82P27701 267 aa10□□□□□ -0.81
SF3A3-204ENST00000462258 PBLDP30039 288 aaPredicted RBP10□□□□□ -0.81
SF3A3-204ENST00000462258 CSTF2P33240 577 aaKnown RBP eCLIP10□□□□□ -0.81
SF3A3-204ENST00000462258 CA5AP35218 305 aa10□□□□□ -0.81
SF3A3-204ENST00000462258 PDE1BQ01064 536 aa10□□□□□ -0.81
SF3A3-204ENST00000462258 VAC14Q08AM6 782 aa10□□□□□ -0.81
SF3A3-204ENST00000462258 DMPKQ09013 629 aa10□□□□□ -0.81
SF3A3-204ENST00000462258 SPARCL1Q14515 664 aa10□□□□□ -0.81
SF3A3-204ENST00000462258 SNAP47Q5SQN1 464 aa10□□□□□ -0.81
SF3A3-204ENST00000462258 TMEM164Q5U3C3 297 aa10□□□□□ -0.81
SF3A3-204ENST00000462258 AGAP9Q5VTM2 703 aa10□□□□□ -0.81
SF3A3-204ENST00000462258 WDR74Q6RFH5 385 aaPredicted RBP10□□□□□ -0.81
SF3A3-204ENST00000462258 FAM129CQ86XR2 697 aa10□□□□□ -0.81
SF3A3-204ENST00000462258 RASGEF1AQ8N9B8 481 aa10□□□□□ -0.81
SF3A3-204ENST00000462258 OR13C4Q8NGS5 318 aa10□□□□□ -0.81
SF3A3-204ENST00000462258 SLC35B2Q8TB61 432 aa10□□□□□ -0.81
SF3A3-204ENST00000462258 ATG4AQ8WYN0 398 aa10□□□□□ -0.81
SF3A3-204ENST00000462258 NCSTNQ92542 709 aa10□□□□□ -0.81
SF3A3-204ENST00000462258 PMEPA1Q969W9 287 aa10□□□□□ -0.81
SF3A3-204ENST00000462258 CXorf40BQ96DE9 158 aa10□□□□□ -0.81
SF3A3-204ENST00000462258 TMEM121Q9BTD3 319 aa10□□□□□ -0.81
SF3A3-204ENST00000462258 ASB8Q9H765 288 aa10□□□□□ -0.81
SF3A3-204ENST00000462258 LRRC40Q9H9A6 602 aa10□□□□□ -0.81
SF3A3-204ENST00000462258 UCK1Q9HA47 277 aa10□□□□□ -0.81
SF3A3-204ENST00000462258 CRLS1Q9UJA2 301 aa10□□□□□ -0.81
SF3A3-204ENST00000462258 KCTD3Q9Y597 815 aa10□□□□□ -0.81
SF3A3-204ENST00000462258 ATMQ13315 3056 aa10□□□□□ -0.81
SF3A3-204ENST00000462258 EIF4E1BA6NMX2 242 aaKnown RBP9.99□□□□□ -0.81
SF3A3-204ENST00000462258 EFCAB7A8K855 629 aa9.99□□□□□ -0.81
SF3A3-204ENST00000462258 METTL18O95568 372 aa9.99□□□□□ -0.81
SF3A3-204ENST00000462258 CCDC175P0C221 793 aa9.99□□□□□ -0.81
SF3A3-204ENST00000462258 FGF3P11487 239 aaPredicted RBP9.99□□□□□ -0.81
SF3A3-204ENST00000462258 XRCC1P18887 633 aaPredicted RBP9.99□□□□□ -0.81
SF3A3-204ENST00000462258 ITGALP20701 1170 aa9.99□□□□□ -0.81
SF3A3-204ENST00000462258 HADHAP40939 763 aa9.99□□□□□ -0.81
SF3A3-204ENST00000462258 SLC19A1P41440 591 aa9.99□□□□□ -0.81
SF3A3-204ENST00000462258 HALP42357 657 aa9.99□□□□□ -0.81
SF3A3-204ENST00000462258 CAPZBP47756 277 aa9.99□□□□□ -0.81
SF3A3-204ENST00000462258 GFERP55789 205 aa9.99□□□□□ -0.81
SF3A3-204ENST00000462258 RAB15P59190 212 aa9.99□□□□□ -0.81
SF3A3-204ENST00000462258 TMPRSS15P98073 1019 aa9.99□□□□□ -0.81
SF3A3-204ENST00000462258 MSLNQ13421 630 aaPredicted RBP9.99□□□□□ -0.81
SF3A3-204ENST00000462258 TGIF1Q15583 401 aa9.99□□□□□ -0.81
SF3A3-204ENST00000462258 LONRF2Q1L5Z9 754 aa9.99□□□□□ -0.81
SF3A3-204ENST00000462258 PARP6Q2NL67 630 aa9.99□□□□□ -0.81
SF3A3-204ENST00000462258 KCTD11Q693B1 232 aa9.99□□□□□ -0.81
SF3A3-204ENST00000462258 DENND5AQ6IQ26 1287 aa9.99□□□□□ -0.81
SF3A3-204ENST00000462258 ABRAXAS1Q6UWZ7 409 aa9.99□□□□□ -0.81
SF3A3-204ENST00000462258 WASH2PQ6VEQ5 465 aa9.99□□□□□ -0.81
SF3A3-204ENST00000462258 CCDC81Q6ZN84 652 aa9.99□□□□□ -0.81
SF3A3-204ENST00000462258 TMEM26Q6ZUK4 368 aa9.99□□□□□ -0.81
SF3A3-204ENST00000462258 DET1Q7L5Y6 550 aa9.99□□□□□ -0.81
SF3A3-204ENST00000462258 AMZ2Q86W34 360 aa9.99□□□□□ -0.81
SF3A3-204ENST00000462258 ZFAND4Q86XD8 727 aa9.99□□□□□ -0.81
SF3A3-204ENST00000462258 RBM12BQ8IXT5 1001 aaKnown RBP9.99□□□□□ -0.81
SF3A3-204ENST00000462258 TAB3Q8N5C8 712 aaPredicted RBP9.99□□□□□ -0.81
SF3A3-204ENST00000462258 GPR150Q8NGU9 434 aa9.99□□□□□ -0.81
SF3A3-204ENST00000462258 ZNF398Q8TD17 642 aa9.99□□□□□ -0.81
SF3A3-204ENST00000462258 ART4Q93070 314 aa9.99□□□□□ -0.81
SF3A3-204ENST00000462258 ZNF514Q96K75 400 aaPredicted RBP9.99□□□□□ -0.81
SF3A3-204ENST00000462258 ALS2CR12Q96Q35 445 aa9.99□□□□□ -0.81
SF3A3-204ENST00000462258 TAAR9Q96RI9 348 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms