RNA–Protein interactions for RNA: ENST00000460333.5

VPS13D-202, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 4,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-202ENST00000460333 OR6B1O95007 311 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 MLYCDO95822 493 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 ZNF45Q02386 682 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 EFEMP1Q12805 493 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 PLCL1Q15111 1095 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 SPDYE7PQ495Y7 208 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 SH3PXD2AQ5TCZ1 1133 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 PKN3Q6P5Z2 889 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 TTC23LQ6PF05 361 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 GK5Q6ZS86 529 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 BEND5Q7L4P6 421 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 FGD2Q7Z6J4 655 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 ANKRD13BQ86YJ7 626 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 IQCF2Q8IXL9 164 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 CCDC185Q8N715 623 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 DBF4BQ8NFT6 615 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 CLEC4CQ8WTT0 213 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 SERAC1Q96JX3 654 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 MARK4Q96L34 752 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 LPIN3Q9BQK8 851 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 ELOVL6Q9H5J4 265 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 CCSER2Q9H7U1 834 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 NEK6Q9HC98 313 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 ARHGEF4Q9NR80 690 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 UXTQ9UBK9 157 aaPredicted RBP6.14□□□□□ -1.43
VPS13D-202ENST00000460333 RABL2BQ9UNT1 228 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 C9IYK1 514 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 F5H5T6 163 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 UBXN8O00124 270 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 PDPK1O15530 556 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 DYRK3O43781 588 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 MAP3K6O95382 1288 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 OXSR1O95747 527 aaPredicted RBP6.14□□□□□ -1.43
VPS13D-202ENST00000460333 FADS2O95864 444 aaKnown RBP6.14□□□□□ -1.43
VPS13D-202ENST00000460333 FYNP06241 537 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 ITGA2P17301 1181 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 ETFBP38117 255 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 PIK3CGP48736 1102 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 TUBP50607 506 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 HSF2Q03933 536 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 TLE2Q04725 743 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 PRKG2Q13237 762 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 DSC3Q14574 896 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 PCID2Q5JVF3 399 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 FNBP1LQ5T0N5 605 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 C11orf88Q6PI97 169 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 TMPRSS11AQ6ZMR5 421 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 CYP4V2Q6ZWL3 525 aaPredicted RBP6.14□□□□□ -1.43
VPS13D-202ENST00000460333 CACTIN-AS1Q8N1I8 211 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 SCML4Q8N228 414 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 DCAKDQ8WVC6 231 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 RDH12Q96NR8 316 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 SMOQ99835 787 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 TDRD1Q9BXT4 1180 aaKnown RBP6.14□□□□□ -1.43
VPS13D-202ENST00000460333 MED28Q9H204 178 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 PRDM12Q9H4Q4 367 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 CORO2BQ9UQ03 480 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 SNX8Q9Y5X2 465 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 SLC12A8A0AV02 714 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 YJEFN3A6XGL0 299 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 H3BMM5 538 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 J3QRK9 145 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 TBX1O43435 398 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 GLP2RO95838 553 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 CLTBP09497 229 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 ERVK-10P10266 1014 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 SLC2A4P14672 509 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 MAGEA11P43364 429 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 GSTM5P46439 218 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 RENBPP51606 427 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 GMFBP60983 142 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 RFTN1Q14699 578 aaPredicted RBP6.14□□□□□ -1.43
VPS13D-202ENST00000460333 ATAT1Q5SQI0 421 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 VARS2Q5ST30 1063 aaKnown RBP6.14□□□□□ -1.43
VPS13D-202ENST00000460333 OTOP2Q7RTS6 562 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 ERMP1Q7Z2K6 904 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 SPPL2CQ8IUH8 684 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 DENND6AQ8IWF6 608 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 ELMOD2Q8IZ81 293 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 FBXL8Q96CD0 374 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 PHF21BQ96EK2 531 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 C8orf48Q96LL4 319 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 PEBP4Q96S96 227 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 FICDQ9BVA6 458 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 OSBPL2Q9H1P3 480 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 SLA2Q9H6Q3 261 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 EIF2B3Q9NR50 452 aaKnown RBP6.14□□□□□ -1.43
VPS13D-202ENST00000460333 MIOSQ9NXC5 875 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 TOR4AQ9NXH8 423 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 AKAP7Q9P0M2 348 aaPredicted RBP6.14□□□□□ -1.43
VPS13D-202ENST00000460333 TBC1D14Q9P2M4 693 aa6.14□□□□□ -1.43
VPS13D-202ENST00000460333 TNPO3Q9Y5L0 923 aaKnown RBP6.14□□□□□ -1.43
VPS13D-202ENST00000460333 A0A0J9YYE9 177 aa6.13□□□□□ -1.43
VPS13D-202ENST00000460333 FAM92AA1XBS5 289 aa6.13□□□□□ -1.43
VPS13D-202ENST00000460333 EFCAB9A8MZ26 197 aa6.13□□□□□ -1.43
VPS13D-202ENST00000460333 TMEM189-UBE2V1I3L0A0 370 aa6.13□□□□□ -1.43
VPS13D-202ENST00000460333 TFECO14948 347 aaPredicted RBP6.13□□□□□ -1.43
VPS13D-202ENST00000460333 S100A6P06703 90 aa6.13□□□□□ -1.43
VPS13D-202ENST00000460333 DLDP09622 509 aaKnown RBP6.13□□□□□ -1.43
VPS13D-202ENST00000460333 CDK4P11802 303 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms