RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 BRSK1Q8TDC3 778 aa18.62■□□□□ 0.57
COL5A1-203ENST00000460264 HES6Q96HZ4 224 aa18.62■□□□□ 0.57
COL5A1-203ENST00000460264 TTC25Q96NG3 672 aa18.62■□□□□ 0.57
COL5A1-203ENST00000460264 TBC1D10AQ9BXI6 508 aa18.62■□□□□ 0.57
COL5A1-203ENST00000460264 EPB41L1Q9H4G0 881 aa18.62■□□□□ 0.57
COL5A1-203ENST00000460264 UCK1Q9HA47 277 aa18.62■□□□□ 0.57
COL5A1-203ENST00000460264 ZNF624Q9P2J8 865 aaPredicted RBP18.62■□□□□ 0.57
COL5A1-203ENST00000460264 R3HDM2Q9Y2K5 976 aaKnown RBP18.62■□□□□ 0.57
COL5A1-203ENST00000460264 C5orf60A6NFR6 353 aa18.61■□□□□ 0.57
COL5A1-203ENST00000460264 C2orf81A6NN90 581 aa18.61■□□□□ 0.57
COL5A1-203ENST00000460264 GOLGA6L6A8MZA4 724 aa18.61■□□□□ 0.57
COL5A1-203ENST00000460264 K7ENP7 123 aa18.61■□□□□ 0.57
COL5A1-203ENST00000460264 PRAMEF1O95521 474 aa18.61■□□□□ 0.57
COL5A1-203ENST00000460264 BRAFP15056 766 aa18.61■□□□□ 0.57
COL5A1-203ENST00000460264 VCLP18206 1134 aa18.61■□□□□ 0.57
COL5A1-203ENST00000460264 XRCC1P18887 633 aaPredicted RBP18.61■□□□□ 0.57
COL5A1-203ENST00000460264 CSTF2P33240 577 aaKnown RBP eCLIP18.61■□□□□ 0.57
COL5A1-203ENST00000460264 SLC19A1P41440 591 aa18.61■□□□□ 0.57
COL5A1-203ENST00000460264 MAPK9P45984 424 aa18.61■□□□□ 0.57
COL5A1-203ENST00000460264 MSLNQ13421 630 aaPredicted RBP18.61■□□□□ 0.57
COL5A1-203ENST00000460264 TMEM164Q5U3C3 297 aa18.61■□□□□ 0.57
COL5A1-203ENST00000460264 AGAP9Q5VTM2 703 aa18.61■□□□□ 0.57
COL5A1-203ENST00000460264 INO80CQ6PI98 192 aaPredicted RBP18.61■□□□□ 0.57
COL5A1-203ENST00000460264 WASH2PQ6VEQ5 465 aa18.61■□□□□ 0.57
COL5A1-203ENST00000460264 ZFAND4Q86XD8 727 aa18.61■□□□□ 0.57
COL5A1-203ENST00000460264 RASGEF1AQ8N9B8 481 aa18.61■□□□□ 0.57
COL5A1-203ENST00000460264 FAM71DQ8N9W8 422 aa18.61■□□□□ 0.57
COL5A1-203ENST00000460264 OR4K2Q8NGD2 314 aa18.61■□□□□ 0.57
COL5A1-203ENST00000460264 NCSTNQ92542 709 aa18.61■□□□□ 0.57
COL5A1-203ENST00000460264 PMEPA1Q969W9 287 aa18.61■□□□□ 0.57
COL5A1-203ENST00000460264 CCNL2Q96S94 520 aaPredicted RBP18.61■□□□□ 0.57
COL5A1-203ENST00000460264 TBL1YQ9BQ87 522 aa18.61■□□□□ 0.57
COL5A1-203ENST00000460264 WASH6PQ9NQA3 447 aa18.61■□□□□ 0.57
COL5A1-203ENST00000460264 KCTD3Q9Y597 815 aa18.61■□□□□ 0.57
COL5A1-203ENST00000460264 TCRBV7S2A1N4TA0A589 114 aa18.6■□□□□ 0.57
COL5A1-203ENST00000460264 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.6■□□□□ 0.57
COL5A1-203ENST00000460264 IDSP22304 550 aa18.6■□□□□ 0.57
COL5A1-203ENST00000460264 RPL10P27635 214 aaKnown RBP18.6■□□□□ 0.57
COL5A1-203ENST00000460264 CD82P27701 267 aa18.6■□□□□ 0.57
COL5A1-203ENST00000460264 CTSCP53634 463 aa18.6■□□□□ 0.57
COL5A1-203ENST00000460264 DRG2P55039 364 aaKnown RBP18.6■□□□□ 0.57
COL5A1-203ENST00000460264 DENND5AQ6IQ26 1287 aa18.6■□□□□ 0.57
COL5A1-203ENST00000460264 ABRAXAS1Q6UWZ7 409 aa18.6■□□□□ 0.57
COL5A1-203ENST00000460264 CCDC81Q6ZN84 652 aa18.6■□□□□ 0.57
COL5A1-203ENST00000460264 ARHGEF18Q6ZSZ5 1173 aa18.6■□□□□ 0.57
COL5A1-203ENST00000460264 TMEM26Q6ZUK4 368 aa18.6■□□□□ 0.57
COL5A1-203ENST00000460264 TRIM48Q8IWZ4 208 aa18.6■□□□□ 0.57
COL5A1-203ENST00000460264 RNF10Q8N5U6 811 aaKnown RBP18.6■□□□□ 0.57
COL5A1-203ENST00000460264 CCDC112Q8NEF3 446 aa18.6■□□□□ 0.57
COL5A1-203ENST00000460264 SLC35B2Q8TB61 432 aa18.6■□□□□ 0.57
COL5A1-203ENST00000460264 ART4Q93070 314 aa18.6■□□□□ 0.57
COL5A1-203ENST00000460264 TAAR9Q96RI9 348 aa18.6■□□□□ 0.57
COL5A1-203ENST00000460264 FKBPLQ9UIM3 349 aa18.6■□□□□ 0.57
COL5A1-203ENST00000460264 PCDHGA3Q9Y5H0 932 aa18.6■□□□□ 0.57
COL5A1-203ENST00000460264 FASNP49327 2511 aaKnown RBP18.6■□□□□ 0.57
COL5A1-203ENST00000460264 MN1Q10571 1320 aaPredicted RBP18.59■□□□□ 0.57
COL5A1-203ENST00000460264 OR52A4PA6NMU1 304 aa18.59■□□□□ 0.57
COL5A1-203ENST00000460264 VIPP01282 170 aa18.59■□□□□ 0.57
COL5A1-203ENST00000460264 AKT1P31749 480 aa18.59■□□□□ 0.57
COL5A1-203ENST00000460264 ARSDP51689 593 aa18.59■□□□□ 0.57
COL5A1-203ENST00000460264 ZNF140P52738 457 aaPredicted RBP18.59■□□□□ 0.57
COL5A1-203ENST00000460264 RHDQ02161 417 aa18.59■□□□□ 0.57
COL5A1-203ENST00000460264 DMPKQ09013 629 aa18.59■□□□□ 0.57
COL5A1-203ENST00000460264 SRSF6Q13247 344 aaKnown RBP18.59■□□□□ 0.57
COL5A1-203ENST00000460264 SPARCL1Q14515 664 aa18.59■□□□□ 0.57
COL5A1-203ENST00000460264 SNAP47Q5SQN1 464 aa18.59■□□□□ 0.57
COL5A1-203ENST00000460264 KCTD11Q693B1 232 aa18.59■□□□□ 0.57
COL5A1-203ENST00000460264 PCSK4Q6UW60 755 aa18.59■□□□□ 0.57
COL5A1-203ENST00000460264 ARHGAP22Q7Z5H3 698 aa18.59■□□□□ 0.57
COL5A1-203ENST00000460264 AMZ2Q86W34 360 aa18.59■□□□□ 0.57
COL5A1-203ENST00000460264 FAM129CQ86XR2 697 aa18.59■□□□□ 0.57
COL5A1-203ENST00000460264 DTX1Q86Y01 620 aa18.59■□□□□ 0.57
COL5A1-203ENST00000460264 BMPERQ8N8U9 685 aa18.59■□□□□ 0.57
COL5A1-203ENST00000460264 ZNF398Q8TD17 642 aa18.59■□□□□ 0.57
COL5A1-203ENST00000460264 DDA1Q9BW61 102 aa18.59■□□□□ 0.57
COL5A1-203ENST00000460264 TSGA10Q9BZW7 698 aa18.59■□□□□ 0.57
COL5A1-203ENST00000460264 ARNT2Q9HBZ2 717 aa18.59■□□□□ 0.57
COL5A1-203ENST00000460264 POT1Q9NUX5 634 aa18.59■□□□□ 0.57
COL5A1-203ENST00000460264 WDR70Q9NW82 654 aa18.59■□□□□ 0.57
COL5A1-203ENST00000460264 OCIAD1Q9NX40 245 aa18.59■□□□□ 0.57
COL5A1-203ENST00000460264 OGFRQ9NZT2 677 aa18.59■□□□□ 0.57
COL5A1-203ENST00000460264 FEZ2Q9UHY8 353 aaPredicted RBP18.59■□□□□ 0.57
COL5A1-203ENST00000460264 CFAP46Q8IYW2 2715 aa18.58■□□□□ 0.57
COL5A1-203ENST00000460264 OR2AG2A6NM03 316 aa18.58■□□□□ 0.56
COL5A1-203ENST00000460264 EIF4E1BA6NMX2 242 aaKnown RBP18.58■□□□□ 0.56
COL5A1-203ENST00000460264 EFCAB7A8K855 629 aa18.58■□□□□ 0.56
COL5A1-203ENST00000460264 A8MU76 341 aa18.58■□□□□ 0.56
COL5A1-203ENST00000460264 B4E171 279 aa18.58■□□□□ 0.56
COL5A1-203ENST00000460264 ERVH48-1M5A8F1 160 aa18.58■□□□□ 0.56
COL5A1-203ENST00000460264 TK2O00142 265 aa18.58■□□□□ 0.56
COL5A1-203ENST00000460264 EFSO43281 561 aa18.58■□□□□ 0.56
COL5A1-203ENST00000460264 KCNJ13O60928 360 aa18.58■□□□□ 0.56
COL5A1-203ENST00000460264 POP7O75817 140 aaKnown RBP18.58■□□□□ 0.56
COL5A1-203ENST00000460264 SRP72O76094 671 aaKnown RBP18.58■□□□□ 0.56
COL5A1-203ENST00000460264 METTL18O95568 372 aa18.58■□□□□ 0.56
COL5A1-203ENST00000460264 CRTAMO95727 393 aa18.58■□□□□ 0.56
COL5A1-203ENST00000460264 TSPAN7P41732 249 aa18.58■□□□□ 0.56
COL5A1-203ENST00000460264 GDF10P55107 478 aa18.58■□□□□ 0.56
COL5A1-203ENST00000460264 GSDMDP57764 484 aa18.58■□□□□ 0.56
COL5A1-203ENST00000460264 XIAPP98170 497 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms