RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 EPHX4Q8IUS5 362 aa17.93■□□□□ 0.46
HPS3-202ENST00000460120 LKAAEAR1Q8TD35 194 aa17.93■□□□□ 0.46
HPS3-202ENST00000460120 DGCR14Q96DF8 476 aaKnown RBP17.93■□□□□ 0.46
HPS3-202ENST00000460120 SLC2A11Q9BYW1 496 aa17.93■□□□□ 0.46
HPS3-202ENST00000460120 ZNF696Q9H7X3 374 aa17.93■□□□□ 0.46
HPS3-202ENST00000460120 LIN28AQ9H9Z2 209 aaKnown RBP17.93■□□□□ 0.46
HPS3-202ENST00000460120 SUN2Q9UH99 717 aa17.93■□□□□ 0.46
HPS3-202ENST00000460120 SLC4A7Q9Y6M7 1214 aa17.93■□□□□ 0.46
HPS3-202ENST00000460120 COMMD3-BMI1R4GMX3 469 aa17.93■□□□□ 0.46
HPS3-202ENST00000460120 HSPA7P48741 367 aa17.93■□□□□ 0.46
HPS3-202ENST00000460120 MTPNP58546 118 aa17.93■□□□□ 0.46
HPS3-202ENST00000460120 INPP5AQ14642 412 aa17.93■□□□□ 0.46
HPS3-202ENST00000460120 NR6A1Q15406 480 aa17.93■□□□□ 0.46
HPS3-202ENST00000460120 OFCC1Q8IZS5 231 aa17.93■□□□□ 0.46
HPS3-202ENST00000460120 ZNF786Q8N393 782 aa17.93■□□□□ 0.46
HPS3-202ENST00000460120 SEPT8Q92599 483 aa17.93■□□□□ 0.46
HPS3-202ENST00000460120 TMEM125Q96AQ2 219 aa17.93■□□□□ 0.46
HPS3-202ENST00000460120 TCF12Q99081 682 aa17.93■□□□□ 0.46
HPS3-202ENST00000460120 CIPCQ9C0C6 399 aa17.93■□□□□ 0.46
HPS3-202ENST00000460120 TNKS2Q9H2K2 1166 aa17.93■□□□□ 0.46
HPS3-202ENST00000460120 NSUN3Q9H649 340 aaKnown RBP17.93■□□□□ 0.46
HPS3-202ENST00000460120 VCX3AQ9NNX9 186 aa17.93■□□□□ 0.46
HPS3-202ENST00000460120 AIG1Q9NVV5 245 aa17.93■□□□□ 0.46
HPS3-202ENST00000460120 A0A1W2PP18 115 aa17.92■□□□□ 0.46
HPS3-202ENST00000460120 SMAD6O43541 496 aaKnown RBP17.92■□□□□ 0.46
HPS3-202ENST00000460120 IL10P22301 178 aa17.92■□□□□ 0.46
HPS3-202ENST00000460120 ATP6AP1LQ52LC2 224 aa17.92■□□□□ 0.46
HPS3-202ENST00000460120 C6orf136Q5SQH8 315 aa17.92■□□□□ 0.46
HPS3-202ENST00000460120 TXNDC8Q6A555 127 aa17.92■□□□□ 0.46
HPS3-202ENST00000460120 KIAA2013Q8IYS2 634 aa17.92■□□□□ 0.46
HPS3-202ENST00000460120 TTC30BQ8N4P2 665 aa17.92■□□□□ 0.46
HPS3-202ENST00000460120 MINDY1Q8N5J2 469 aa17.92■□□□□ 0.46
HPS3-202ENST00000460120 RIN3Q8TB24 985 aa17.92■□□□□ 0.46
HPS3-202ENST00000460120 ZFAND2BQ8WV99 257 aa17.92■□□□□ 0.46
HPS3-202ENST00000460120 TTLL2Q9BWV7 592 aa17.92■□□□□ 0.46
HPS3-202ENST00000460120 OSBPL11Q9BXB4 747 aa17.92■□□□□ 0.46
HPS3-202ENST00000460120 OCEL1Q9H607 264 aa17.92■□□□□ 0.46
HPS3-202ENST00000460120 DUS2Q9NX74 493 aaKnown RBP17.92■□□□□ 0.46
HPS3-202ENST00000460120 POLR3HQ9Y535 204 aaPredicted RBP17.92■□□□□ 0.46
HPS3-202ENST00000460120 TUFMP49411 452 aaKnown RBP17.92■□□□□ 0.46
HPS3-202ENST00000460120 ELAVL2Q12926 359 aaKnown RBP17.92■□□□□ 0.46
HPS3-202ENST00000460120 CDH18Q13634 790 aa17.92■□□□□ 0.46
HPS3-202ENST00000460120 RBBP5Q15291 538 aaKnown RBP17.92■□□□□ 0.46
HPS3-202ENST00000460120 AP1ARQ63HQ0 302 aa17.92■□□□□ 0.46
HPS3-202ENST00000460120 DNAJC14Q6Y2X3 702 aaPredicted RBP17.92■□□□□ 0.46
HPS3-202ENST00000460120 APCDD1Q8J025 514 aa17.92■□□□□ 0.46
HPS3-202ENST00000460120 ARL14EPQ8N8R7 260 aaPredicted RBP17.92■□□□□ 0.46
HPS3-202ENST00000460120 FBXL20Q96IG2 436 aa17.92■□□□□ 0.46
HPS3-202ENST00000460120 EGFL8Q99944 293 aa17.92■□□□□ 0.46
HPS3-202ENST00000460120 CLSTN3Q9BQT9 956 aa17.92■□□□□ 0.46
HPS3-202ENST00000460120 CCM2LQ9NUG4 571 aaPredicted RBP17.92■□□□□ 0.46
HPS3-202ENST00000460120 ABCD2Q9UBJ2 740 aa17.92■□□□□ 0.46
HPS3-202ENST00000460120 LHX3Q9UBR4 397 aa17.92■□□□□ 0.46
HPS3-202ENST00000460120 VPS51Q9UID3 782 aa17.92■□□□□ 0.46
HPS3-202ENST00000460120 ZNF711Q9Y462 761 aa17.92■□□□□ 0.46
HPS3-202ENST00000460120 ARIH1Q9Y4X5 557 aaPredicted RBP17.92■□□□□ 0.46
HPS3-202ENST00000460120 PCDHA9Q9Y5H5 950 aa17.92■□□□□ 0.46
HPS3-202ENST00000460120 HEMK1Q9Y5R4 338 aaPredicted RBP17.92■□□□□ 0.46
HPS3-202ENST00000460120 PRSS21Q9Y6M0 314 aa17.92■□□□□ 0.46
HPS3-202ENST00000460120 PRRG1O14668 218 aa17.92■□□□□ 0.46
HPS3-202ENST00000460120 PRAMEF1O95521 474 aa17.92■□□□□ 0.46
HPS3-202ENST00000460120 MLYCDO95822 493 aa17.92■□□□□ 0.46
HPS3-202ENST00000460120 G6PDP11413 515 aa17.92■□□□□ 0.46
HPS3-202ENST00000460120 USP41Q3LFD5 358 aa17.92■□□□□ 0.46
HPS3-202ENST00000460120 C5orf22Q49AR2 442 aa17.92■□□□□ 0.46
HPS3-202ENST00000460120 MBOAT1Q6ZNC8 495 aa17.92■□□□□ 0.46
HPS3-202ENST00000460120 TPGS1Q6ZTW0 290 aa17.92■□□□□ 0.46
HPS3-202ENST00000460120 SFRP1Q8N474 314 aa17.92■□□□□ 0.46
HPS3-202ENST00000460120 OR4F6Q8NGB9 312 aa17.92■□□□□ 0.46
HPS3-202ENST00000460120 MTFMTQ96DP5 389 aaKnown RBP17.92■□□□□ 0.46
HPS3-202ENST00000460120 VPS50Q96JG6 964 aa17.92■□□□□ 0.46
HPS3-202ENST00000460120 C17orf80Q9BSJ5 609 aa17.92■□□□□ 0.46
HPS3-202ENST00000460120 SLC52A3Q9NQ40 469 aa17.92■□□□□ 0.46
HPS3-202ENST00000460120 SMOXQ9NWM0 555 aa17.92■□□□□ 0.46
HPS3-202ENST00000460120 PDE4DIPQ5VU43 2346 aa17.91■□□□□ 0.46
HPS3-202ENST00000460120 C1orf232A0A0U1RR37 186 aa17.91■□□□□ 0.46
HPS3-202ENST00000460120 PCNAP12004 261 aa17.91■□□□□ 0.46
HPS3-202ENST00000460120 PCSK6P29122 969 aa17.91■□□□□ 0.46
HPS3-202ENST00000460120 ZFP36L2P47974 494 aaKnown RBP17.91■□□□□ 0.46
HPS3-202ENST00000460120 BTG3Q14201 252 aaPredicted RBP17.91■□□□□ 0.46
HPS3-202ENST00000460120 SELPLGQ14242 412 aa17.91■□□□□ 0.46
HPS3-202ENST00000460120 NCEH1Q6PIU2 408 aa17.91■□□□□ 0.46
HPS3-202ENST00000460120 Q6ZSR9 355 aa17.91■□□□□ 0.46
HPS3-202ENST00000460120 GOLGA7Q7Z5G4 137 aa17.91■□□□□ 0.46
HPS3-202ENST00000460120 SERPINA9Q86WD7 417 aa17.91■□□□□ 0.46
HPS3-202ENST00000460120 ZFRQ96KR1 1074 aaKnown RBP17.91■□□□□ 0.46
HPS3-202ENST00000460120 TRIM15Q9C019 465 aa17.91■□□□□ 0.46
HPS3-202ENST00000460120 PFDN6O15212 129 aa17.91■□□□□ 0.46
HPS3-202ENST00000460120 MATN4O95460 622 aa17.91■□□□□ 0.46
HPS3-202ENST00000460120 CAPNS1P04632 268 aa17.91■□□□□ 0.46
HPS3-202ENST00000460120 FASP25445 335 aa17.91■□□□□ 0.46
HPS3-202ENST00000460120 CLCN7P51798 805 aa17.91■□□□□ 0.46
HPS3-202ENST00000460120 ZXDBP98169 803 aa17.91■□□□□ 0.46
HPS3-202ENST00000460120 LSAMPQ13449 338 aa17.91■□□□□ 0.46
HPS3-202ENST00000460120 RCAN2Q14206 197 aa17.91■□□□□ 0.46
HPS3-202ENST00000460120 ABRAXAS2Q15018 415 aa17.91■□□□□ 0.46
HPS3-202ENST00000460120 LRRC73Q5JTD7 316 aa17.91■□□□□ 0.46
HPS3-202ENST00000460120 NANOGP8Q6NSW7 305 aa17.91■□□□□ 0.46
HPS3-202ENST00000460120 CARM1Q86X55 608 aa17.91■□□□□ 0.46
HPS3-202ENST00000460120 ADGRG5Q8IZF4 528 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms