RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 MAP7Q14244 749 aa9.85□□□□□ -0.83
HDLBP-228ENST00000459788 LONRF2Q1L5Z9 754 aa9.85□□□□□ -0.83
HDLBP-228ENST00000459788 ANKRD20A2Q5SQ80 823 aa9.85□□□□□ -0.83
HDLBP-228ENST00000459788 MANEAQ5SRI9 462 aa9.85□□□□□ -0.83
HDLBP-228ENST00000459788 DCAF12Q5T6F0 453 aa9.85□□□□□ -0.83
HDLBP-228ENST00000459788 ANKRD20A1Q5TYW2 823 aa9.85□□□□□ -0.83
HDLBP-228ENST00000459788 ANKRD20A3Q5VUR7 823 aa9.85□□□□□ -0.83
HDLBP-228ENST00000459788 ALS2CLQ60I27 953 aa9.85□□□□□ -0.83
HDLBP-228ENST00000459788 C11orf96Q7Z7L8 435 aa9.85□□□□□ -0.83
HDLBP-228ENST00000459788 KIAA1328Q86T90 577 aa9.85□□□□□ -0.83
HDLBP-228ENST00000459788 AMZ2Q86W34 360 aa9.85□□□□□ -0.83
HDLBP-228ENST00000459788 ZNF547Q8IVP9 402 aa9.85□□□□□ -0.83
HDLBP-228ENST00000459788 CARFQ8N187 725 aa9.85□□□□□ -0.83
HDLBP-228ENST00000459788 BMPERQ8N8U9 685 aa9.85□□□□□ -0.83
HDLBP-228ENST00000459788 IPMKQ8NFU5 416 aa9.85□□□□□ -0.83
HDLBP-228ENST00000459788 ULK4Q96C45 1275 aa9.85□□□□□ -0.83
HDLBP-228ENST00000459788 SGF29Q96ES7 293 aa9.85□□□□□ -0.83
HDLBP-228ENST00000459788 SPATA13Q96N96 652 aa9.85□□□□□ -0.83
HDLBP-228ENST00000459788 HEMGNQ9BXL5 484 aa9.85□□□□□ -0.83
HDLBP-228ENST00000459788 UBP1Q9NZI7 540 aa9.85□□□□□ -0.83
HDLBP-228ENST00000459788 TMPRSS11EQ9UL52 423 aa9.85□□□□□ -0.83
HDLBP-228ENST00000459788 REXO2Q9Y3B8 237 aaKnown RBP9.85□□□□□ -0.83
HDLBP-228ENST00000459788 PCYT1BQ9Y5K3 369 aaPredicted RBP9.85□□□□□ -0.83
HDLBP-228ENST00000459788 SEC16AO15027 2179 aa9.85□□□□□ -0.83
HDLBP-228ENST00000459788 GRID2IPA4D2P6 1211 aa9.84□□□□□ -0.83
HDLBP-228ENST00000459788 EFSO43281 561 aa9.84□□□□□ -0.83
HDLBP-228ENST00000459788 SNX2O60749 519 aa9.84□□□□□ -0.83
HDLBP-228ENST00000459788 SLC19A1P41440 591 aa9.84□□□□□ -0.83
HDLBP-228ENST00000459788 COL9A2Q14055 689 aaPredicted RBP9.84□□□□□ -0.83
HDLBP-228ENST00000459788 P3H1Q32P28 736 aa9.84□□□□□ -0.83
HDLBP-228ENST00000459788 GPR33Q49SQ1 333 aa9.84□□□□□ -0.83
HDLBP-228ENST00000459788 CRTC2Q53ET0 693 aaPredicted RBP9.84□□□□□ -0.83
HDLBP-228ENST00000459788 TAF1BQ53T94 588 aaPredicted RBP9.84□□□□□ -0.83
HDLBP-228ENST00000459788 NKAIN2Q5VXU1 208 aa9.84□□□□□ -0.83
HDLBP-228ENST00000459788 KLHL35Q6PF15 583 aa9.84□□□□□ -0.83
HDLBP-228ENST00000459788 DARS2Q6PI48 645 aaKnown RBP9.84□□□□□ -0.83
HDLBP-228ENST00000459788 PCSK4Q6UW60 755 aa9.84□□□□□ -0.83
HDLBP-228ENST00000459788 RAD9BQ6WBX8 426 aa9.84□□□□□ -0.83
HDLBP-228ENST00000459788 PEX26Q7Z412 305 aa9.84□□□□□ -0.83
HDLBP-228ENST00000459788 BPHLQ86WA6 291 aaPredicted RBP9.84□□□□□ -0.83
HDLBP-228ENST00000459788 TRAPPC5Q8IUR0 188 aa9.84□□□□□ -0.83
HDLBP-228ENST00000459788 TMEM139Q8IV31 216 aa9.84□□□□□ -0.83
HDLBP-228ENST00000459788 TRIM48Q8IWZ4 208 aa9.84□□□□□ -0.83
HDLBP-228ENST00000459788 ZNF398Q8TD17 642 aa9.84□□□□□ -0.83
HDLBP-228ENST00000459788 BLOC1S5Q8TDH9 187 aa9.84□□□□□ -0.83
HDLBP-228ENST00000459788 MED8Q96G25 268 aa9.84□□□□□ -0.83
HDLBP-228ENST00000459788 LINC00615Q96LM1 132 aaPredicted RBP9.84□□□□□ -0.83
HDLBP-228ENST00000459788 SPRY4Q9C004 299 aa9.84□□□□□ -0.83
HDLBP-228ENST00000459788 LACRTQ9GZZ8 138 aa9.84□□□□□ -0.83
HDLBP-228ENST00000459788 OSGEPL1Q9H4B0 414 aa9.84□□□□□ -0.83
HDLBP-228ENST00000459788 SLC40A1Q9NP59 571 aa9.84□□□□□ -0.83
HDLBP-228ENST00000459788 PRDM8Q9NQV8 689 aa9.84□□□□□ -0.83
HDLBP-228ENST00000459788 SLC39A1Q9NY26 324 aa9.84□□□□□ -0.83
HDLBP-228ENST00000459788 FOXJ2Q9P0K8 574 aa9.84□□□□□ -0.83
HDLBP-228ENST00000459788 SEMA5BQ9P283 1151 aa9.84□□□□□ -0.83
HDLBP-228ENST00000459788 ZNF624Q9P2J8 865 aaPredicted RBP9.84□□□□□ -0.83
HDLBP-228ENST00000459788 SLC23A2Q9UGH3 650 aa9.84□□□□□ -0.83
HDLBP-228ENST00000459788 ACSL5Q9ULC5 683 aa9.84□□□□□ -0.83
HDLBP-228ENST00000459788 PRKAB1Q9Y478 270 aa9.84□□□□□ -0.83
HDLBP-228ENST00000459788 TMEM184BQ9Y519 407 aaPredicted RBP9.84□□□□□ -0.83
HDLBP-228ENST00000459788 C17orf113A0A1B0GUU1 675 aa9.83□□□□□ -0.84
HDLBP-228ENST00000459788 ERI2A8K979 691 aaKnown RBP9.83□□□□□ -0.84
HDLBP-228ENST00000459788 PDZK1P1A8MUH7 402 aa9.83□□□□□ -0.84
HDLBP-228ENST00000459788 H7C0S8 307 aa9.83□□□□□ -0.84
HDLBP-228ENST00000459788 GAPDHSO14556 408 aaPredicted RBP9.83□□□□□ -0.84
HDLBP-228ENST00000459788 KCNN4O15554 427 aa9.83□□□□□ -0.84
HDLBP-228ENST00000459788 UBXN7O94888 489 aa9.83□□□□□ -0.84
HDLBP-228ENST00000459788 SLC4A1P02730 911 aa9.83□□□□□ -0.84
HDLBP-228ENST00000459788 RALBP11234 206 aa9.83□□□□□ -0.84
HDLBP-228ENST00000459788 CCL4P13236 92 aa9.83□□□□□ -0.84
HDLBP-228ENST00000459788 PSMA3P25788 255 aa9.83□□□□□ -0.84
HDLBP-228ENST00000459788 MAP4P27816 1152 aaKnown RBP9.83□□□□□ -0.84
HDLBP-228ENST00000459788 STIP1P31948 543 aaKnown RBP9.83□□□□□ -0.84
HDLBP-228ENST00000459788 CHRNA4P43681 627 aa9.83□□□□□ -0.84
HDLBP-228ENST00000459788 CAPZBP47756 277 aa9.83□□□□□ -0.84
HDLBP-228ENST00000459788 KLF1Q13351 362 aaPredicted RBP9.83□□□□□ -0.84
HDLBP-228ENST00000459788 MSLNQ13421 630 aaPredicted RBP9.83□□□□□ -0.84
HDLBP-228ENST00000459788 NFATC2Q13469 925 aa9.83□□□□□ -0.84
HDLBP-228ENST00000459788 IL11RAQ14626 422 aa9.83□□□□□ -0.84
HDLBP-228ENST00000459788 CHRNA6Q15825 494 aa9.83□□□□□ -0.84
HDLBP-228ENST00000459788 PARP6Q2NL67 630 aa9.83□□□□□ -0.84
HDLBP-228ENST00000459788 BCL7AQ4VC05 210 aa9.83□□□□□ -0.84
HDLBP-228ENST00000459788 GPRC6AQ5T6X5 926 aa9.83□□□□□ -0.84
HDLBP-228ENST00000459788 METRNLQ641Q3 311 aa9.83□□□□□ -0.84
HDLBP-228ENST00000459788 B4GALNT4Q76KP1 1039 aa9.83□□□□□ -0.84
HDLBP-228ENST00000459788 PRSS42Q7Z5A4 293 aa9.83□□□□□ -0.84
HDLBP-228ENST00000459788 SLC25A41Q8N5S1 370 aa9.83□□□□□ -0.84
HDLBP-228ENST00000459788 RCBTB1Q8NDN9 531 aa9.83□□□□□ -0.84
HDLBP-228ENST00000459788 GDAP1Q8TB36 358 aa9.83□□□□□ -0.84
HDLBP-228ENST00000459788 NCSTNQ92542 709 aa9.83□□□□□ -0.84
HDLBP-228ENST00000459788 ALG3Q92685 438 aa9.83□□□□□ -0.84
HDLBP-228ENST00000459788 ART4Q93070 314 aa9.83□□□□□ -0.84
HDLBP-228ENST00000459788 NKD1Q969G9 470 aa9.83□□□□□ -0.84
HDLBP-228ENST00000459788 CXorf40BQ96DE9 158 aa9.83□□□□□ -0.84
HDLBP-228ENST00000459788 RTP4Q96DX8 246 aa9.83□□□□□ -0.84
HDLBP-228ENST00000459788 ZDHHC12Q96GR4 267 aa9.83□□□□□ -0.84
HDLBP-228ENST00000459788 HES6Q96HZ4 224 aa9.83□□□□□ -0.84
HDLBP-228ENST00000459788 C9orf72Q96LT7 481 aa9.83□□□□□ -0.84
HDLBP-228ENST00000459788 FCRL4Q96PJ5 515 aa9.83□□□□□ -0.84
HDLBP-228ENST00000459788 CD180Q99467 661 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms