RNA–Protein interactions for RNA: ENST00000458337.5

COMMD1-206, Transcript of copper metabolism domain containing 1, humanhuman

TSL 5

Gene COMMD1, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-206ENST00000458337 GPLD1P80108 840 aa13.11□□□□□ -0.31
COMMD1-206ENST00000458337 TMPRSS15P98073 1019 aa13.11□□□□□ -0.31
COMMD1-206ENST00000458337 HHEXQ03014 270 aa13.11□□□□□ -0.31
COMMD1-206ENST00000458337 EIF3IQ13347 325 aaKnown RBP13.11□□□□□ -0.31
COMMD1-206ENST00000458337 LAMB3Q13751 1172 aa13.11□□□□□ -0.31
COMMD1-206ENST00000458337 POU6F1Q14863 301 aa13.11□□□□□ -0.31
COMMD1-206ENST00000458337 SKIDA1Q1XH10 827 aa13.11□□□□□ -0.31
COMMD1-206ENST00000458337 TBC1D25Q3MII6 688 aa13.11□□□□□ -0.31
COMMD1-206ENST00000458337 USP53Q70EK8 1073 aa13.11□□□□□ -0.31
COMMD1-206ENST00000458337 AMZ2Q86W34 360 aa13.11□□□□□ -0.31
COMMD1-206ENST00000458337 NXPE1Q8N323 547 aa13.11□□□□□ -0.31
COMMD1-206ENST00000458337 SLC35F6Q8N357 371 aa13.11□□□□□ -0.31
COMMD1-206ENST00000458337 SNIP1Q8TAD8 396 aaKnown RBP13.11□□□□□ -0.31
COMMD1-206ENST00000458337 HEXDCQ8WVB3 486 aa13.11□□□□□ -0.31
COMMD1-206ENST00000458337 TMEM159Q96B96 161 aa13.11□□□□□ -0.31
COMMD1-206ENST00000458337 ULK4Q96C45 1275 aa13.11□□□□□ -0.31
COMMD1-206ENST00000458337 LINC00615Q96LM1 132 aaPredicted RBP13.11□□□□□ -0.31
COMMD1-206ENST00000458337 RANBP9Q96S59 729 aa13.11□□□□□ -0.31
COMMD1-206ENST00000458337 DPYSL5Q9BPU6 564 aa13.11□□□□□ -0.31
COMMD1-206ENST00000458337 FOXP3Q9BZS1 431 aa13.11□□□□□ -0.31
COMMD1-206ENST00000458337 EIF2B3Q9NR50 452 aaKnown RBP13.11□□□□□ -0.31
COMMD1-206ENST00000458337 KCNK4Q9NYG8 393 aa13.11□□□□□ -0.31
COMMD1-206ENST00000458337 ZNF624Q9P2J8 865 aaPredicted RBP13.11□□□□□ -0.31
COMMD1-206ENST00000458337 CPNE7Q9UBL6 633 aa13.11□□□□□ -0.31
COMMD1-206ENST00000458337 SATB2Q9UPW6 733 aa13.11□□□□□ -0.31
COMMD1-206ENST00000458337 CFAP47Q6ZTR5 3102 aa13.11□□□□□ -0.31
COMMD1-206ENST00000458337 AHCTF1Q8WYP5 2266 aa13.11□□□□□ -0.31
COMMD1-206ENST00000458337 CDRT15L2A8MXV6 281 aa13.1□□□□□ -0.31
COMMD1-206ENST00000458337 CCL22O00626 93 aa13.1□□□□□ -0.31
COMMD1-206ENST00000458337 CES2O00748 559 aa13.1□□□□□ -0.31
COMMD1-206ENST00000458337 VCLP18206 1134 aa13.1□□□□□ -0.31
COMMD1-206ENST00000458337 MSH3P20585 1137 aa13.1□□□□□ -0.31
COMMD1-206ENST00000458337 ITGALP20701 1170 aa13.1□□□□□ -0.31
COMMD1-206ENST00000458337 ADRA1DP25100 572 aa13.1□□□□□ -0.31
COMMD1-206ENST00000458337 EIF2S3P41091 472 aaKnown RBP13.1□□□□□ -0.31
COMMD1-206ENST00000458337 LIMK2P53671 638 aa13.1□□□□□ -0.31
COMMD1-206ENST00000458337 EPHA4P54764 986 aa13.1□□□□□ -0.31
COMMD1-206ENST00000458337 ACVR1Q04771 509 aa13.1□□□□□ -0.31
COMMD1-206ENST00000458337 BIRC2Q13490 618 aa13.1□□□□□ -0.31
COMMD1-206ENST00000458337 CYP1B1Q16678 543 aa13.1□□□□□ -0.31
COMMD1-206ENST00000458337 AMZ1Q400G9 498 aa13.1□□□□□ -0.31
COMMD1-206ENST00000458337 BCL7AQ4VC05 210 aa13.1□□□□□ -0.31
COMMD1-206ENST00000458337 METRNLQ641Q3 311 aa13.1□□□□□ -0.31
COMMD1-206ENST00000458337 WDR74Q6RFH5 385 aaPredicted RBP13.1□□□□□ -0.31
COMMD1-206ENST00000458337 RAB11FIP2Q7L804 512 aa13.1□□□□□ -0.31
COMMD1-206ENST00000458337 TRAPPC5Q8IUR0 188 aa13.1□□□□□ -0.31
COMMD1-206ENST00000458337 DNAAF3Q8N9W5 541 aa13.1□□□□□ -0.31
COMMD1-206ENST00000458337 OR4D9Q8NGE8 314 aa13.1□□□□□ -0.31
COMMD1-206ENST00000458337 ACTRT1Q8TDG2 376 aa13.1□□□□□ -0.31
COMMD1-206ENST00000458337 SGF29Q96ES7 293 aa13.1□□□□□ -0.31
COMMD1-206ENST00000458337 MS4A14Q96JA4 679 aa13.1□□□□□ -0.31
COMMD1-206ENST00000458337 SLC38A3Q99624 504 aa13.1□□□□□ -0.31
COMMD1-206ENST00000458337 NUDT22Q9BRQ3 303 aa13.1□□□□□ -0.31
COMMD1-206ENST00000458337 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.1□□□□□ -0.31
COMMD1-206ENST00000458337 STRADBQ9C0K7 418 aa13.1□□□□□ -0.31
COMMD1-206ENST00000458337 SEMA6CQ9H3T2 930 aa13.1□□□□□ -0.31
COMMD1-206ENST00000458337 OSGEPL1Q9H4B0 414 aa13.1□□□□□ -0.31
COMMD1-206ENST00000458337 FAM96AQ9H5X1 160 aa13.1□□□□□ -0.31
COMMD1-206ENST00000458337 SYNDIG1Q9H7V2 258 aa13.1□□□□□ -0.31
COMMD1-206ENST00000458337 RDH14Q9HBH5 336 aa13.1□□□□□ -0.31
COMMD1-206ENST00000458337 PIH1D1Q9NWS0 290 aaKnown RBP13.1□□□□□ -0.31
COMMD1-206ENST00000458337 TRMT1Q9NXH9 659 aaKnown RBP13.1□□□□□ -0.31
COMMD1-206ENST00000458337 DNAJC16Q9Y2G8 782 aa13.1□□□□□ -0.31
COMMD1-206ENST00000458337 SLC30A1Q9Y6M5 507 aa13.1□□□□□ -0.31
COMMD1-206ENST00000458337 ZFYVE26Q68DK2 2539 aa13.1□□□□□ -0.31
COMMD1-206ENST00000458337 PIKFYVEQ9Y2I7 2098 aa13.09□□□□□ -0.31
COMMD1-206ENST00000458337 IGHV5-10-1A0A0J9YXX1 117 aa13.09□□□□□ -0.31
COMMD1-206ENST00000458337 HEATR9A2RTY3 570 aa13.09□□□□□ -0.31
COMMD1-206ENST00000458337 MGAT4DA6NG13 374 aa13.09□□□□□ -0.31
COMMD1-206ENST00000458337 OR2AG2A6NM03 316 aa13.09□□□□□ -0.31
COMMD1-206ENST00000458337 E7EVH7 732 aa13.09□□□□□ -0.31
COMMD1-206ENST00000458337 PLD2O14939 933 aa13.09□□□□□ -0.31
COMMD1-206ENST00000458337 KIF5CO60282 957 aa13.09□□□□□ -0.31
COMMD1-206ENST00000458337 KRT37O76014 449 aa13.09□□□□□ -0.31
COMMD1-206ENST00000458337 GAS8O95995 478 aa13.09□□□□□ -0.31
COMMD1-206ENST00000458337 APRTP07741 180 aa13.09□□□□□ -0.31
COMMD1-206ENST00000458337 ATP1B2P14415 290 aaPredicted RBP13.09□□□□□ -0.31
COMMD1-206ENST00000458337 HOXB3P14651 431 aaPredicted RBP13.09□□□□□ -0.31
COMMD1-206ENST00000458337 MSNP26038 577 aaKnown RBP13.09□□□□□ -0.31
COMMD1-206ENST00000458337 RPL10P27635 214 aaKnown RBP13.09□□□□□ -0.31
COMMD1-206ENST00000458337 MC4RP32245 332 aa13.09□□□□□ -0.31
COMMD1-206ENST00000458337 LMAN1P49257 510 aa13.09□□□□□ -0.31
COMMD1-206ENST00000458337 CDKN1CP49918 316 aaPredicted RBP13.09□□□□□ -0.31
COMMD1-206ENST00000458337 ARSDP51689 593 aa13.09□□□□□ -0.31
COMMD1-206ENST00000458337 CDK16Q00536 496 aa13.09□□□□□ -0.31
COMMD1-206ENST00000458337 TRA2AQ13595 282 aaKnown RBP eCLIP13.09□□□□□ -0.31
COMMD1-206ENST00000458337 CLCA4Q14CN2 919 aa13.09□□□□□ -0.31
COMMD1-206ENST00000458337 PLA2G4EQ3MJ16 856 aa13.09□□□□□ -0.31
COMMD1-206ENST00000458337 C3orf38Q5JPI3 329 aa13.09□□□□□ -0.31
COMMD1-206ENST00000458337 FNBP1LQ5T0N5 605 aa13.09□□□□□ -0.31
COMMD1-206ENST00000458337 NKAIN2Q5VXU1 208 aa13.09□□□□□ -0.31
COMMD1-206ENST00000458337 TTC27Q6P3X3 843 aa13.09□□□□□ -0.31
COMMD1-206ENST00000458337 TMEM71Q6P5X7 295 aa13.09□□□□□ -0.31
COMMD1-206ENST00000458337 XKR5Q6UX68 686 aa13.09□□□□□ -0.31
COMMD1-206ENST00000458337 PPP1R21Q6ZMI0 780 aa13.09□□□□□ -0.31
COMMD1-206ENST00000458337 FAM83HQ6ZRV2 1179 aaPredicted RBP13.09□□□□□ -0.31
COMMD1-206ENST00000458337 NLRP9Q7RTR0 991 aa13.09□□□□□ -0.31
COMMD1-206ENST00000458337 GSTA5Q7RTV2 222 aa13.09□□□□□ -0.31
COMMD1-206ENST00000458337 CLEC14AQ86T13 490 aa13.09□□□□□ -0.31
COMMD1-206ENST00000458337 PIANPQ8IYJ0 282 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms