RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 SOD2P04179 222 aa18.17■□□□□ 0.5
SEMA3B-209ENST00000456560 CCL23P55773 120 aa18.17■□□□□ 0.5
SEMA3B-209ENST00000456560 CAPRIN1Q14444 709 aaKnown RBP18.17■□□□□ 0.5
SEMA3B-209ENST00000456560 RBBP7Q16576 425 aa18.17■□□□□ 0.5
SEMA3B-209ENST00000456560 TMEM259Q4ZIN3 620 aa18.17■□□□□ 0.5
SEMA3B-209ENST00000456560 GPRIN3Q6ZVF9 776 aa18.17■□□□□ 0.5
SEMA3B-209ENST00000456560 DNAJB7Q7Z6W7 309 aaPredicted RBP18.17■□□□□ 0.5
SEMA3B-209ENST00000456560 AQP12AQ8IXF9 295 aa18.17■□□□□ 0.5
SEMA3B-209ENST00000456560 HJURPQ8NCD3 748 aaPredicted RBP18.17■□□□□ 0.5
SEMA3B-209ENST00000456560 SLC45A3Q96JT2 553 aa18.17■□□□□ 0.5
SEMA3B-209ENST00000456560 TEX37Q96LM6 180 aa18.17■□□□□ 0.5
SEMA3B-209ENST00000456560 SLC22A12Q96S37 553 aa18.17■□□□□ 0.5
SEMA3B-209ENST00000456560 ZNF382Q96SR6 550 aa18.17■□□□□ 0.5
SEMA3B-209ENST00000456560 ACOX2Q99424 681 aa18.17■□□□□ 0.5
SEMA3B-209ENST00000456560 PAK6Q9NQU5 681 aaPredicted RBP18.17■□□□□ 0.5
SEMA3B-209ENST00000456560 CCM2LQ9NUG4 571 aaPredicted RBP18.17■□□□□ 0.5
SEMA3B-209ENST00000456560 PLK2Q9NYY3 685 aa18.17■□□□□ 0.5
SEMA3B-209ENST00000456560 NUDT4Q9NZJ9 180 aa18.17■□□□□ 0.5
SEMA3B-209ENST00000456560 ST14Q9Y5Y6 855 aa18.17■□□□□ 0.5
SEMA3B-209ENST00000456560 AK5Q9Y6K8 562 aa18.17■□□□□ 0.5
SEMA3B-209ENST00000456560 ASPDHA6ND91 283 aa18.17■□□□□ 0.5
SEMA3B-209ENST00000456560 IQCF5A8MTL0 148 aa18.17■□□□□ 0.5
SEMA3B-209ENST00000456560 E5RI56 91 aa18.17■□□□□ 0.5
SEMA3B-209ENST00000456560 GPR39O43194 453 aa18.17■□□□□ 0.5
SEMA3B-209ENST00000456560 HMGCLP35914 325 aa18.17■□□□□ 0.5
SEMA3B-209ENST00000456560 TWF1Q12792 350 aa18.17■□□□□ 0.5
SEMA3B-209ENST00000456560 BNIP2Q12982 314 aa18.17■□□□□ 0.5
SEMA3B-209ENST00000456560 RCAN2Q14206 197 aa18.17■□□□□ 0.5
SEMA3B-209ENST00000456560 TGFBIQ15582 683 aa18.17■□□□□ 0.5
SEMA3B-209ENST00000456560 MTX3Q5HYI7 312 aa18.17■□□□□ 0.5
SEMA3B-209ENST00000456560 IYDQ6PHW0 289 aa18.17■□□□□ 0.5
SEMA3B-209ENST00000456560 LYSMD3Q7Z3D4 306 aa18.17■□□□□ 0.5
SEMA3B-209ENST00000456560 AMIGO2Q86SJ2 522 aa18.17■□□□□ 0.5
SEMA3B-209ENST00000456560 ANKFN1Q8N957 763 aa18.17■□□□□ 0.5
SEMA3B-209ENST00000456560 CANT1Q8WVQ1 401 aa18.17■□□□□ 0.5
SEMA3B-209ENST00000456560 PIH1D2Q8WWB5 315 aa18.17■□□□□ 0.5
SEMA3B-209ENST00000456560 SLC29A1Q99808 456 aa18.17■□□□□ 0.5
SEMA3B-209ENST00000456560 PKP3Q9Y446 797 aa18.17■□□□□ 0.5
SEMA3B-209ENST00000456560 SCAMP3O14828 347 aaKnown RBP18.16■□□□□ 0.5
SEMA3B-209ENST00000456560 PQBP1O60828 265 aaKnown RBP18.16■□□□□ 0.5
SEMA3B-209ENST00000456560 OR4F21O95013 312 aa18.16■□□□□ 0.5
SEMA3B-209ENST00000456560 PGLSO95336 258 aa18.16■□□□□ 0.5
SEMA3B-209ENST00000456560 FAM58BPP0C7Q3 252 aa18.16■□□□□ 0.5
SEMA3B-209ENST00000456560 BMP2P12643 396 aa18.16■□□□□ 0.5
SEMA3B-209ENST00000456560 CSKP41240 450 aa18.16■□□□□ 0.5
SEMA3B-209ENST00000456560 GRIA3P42263 894 aa18.16■□□□□ 0.5
SEMA3B-209ENST00000456560 PDCD4Q53EL6 469 aaKnown RBP18.16■□□□□ 0.5
SEMA3B-209ENST00000456560 LCN8Q6JVE9 175 aa18.16■□□□□ 0.5
SEMA3B-209ENST00000456560 SCIMPQ6UWF3 145 aa18.16■□□□□ 0.5
SEMA3B-209ENST00000456560 CHERPQ8IWX8 916 aaKnown RBP18.16■□□□□ 0.5
SEMA3B-209ENST00000456560 GOLM1Q8NBJ4 401 aa18.16■□□□□ 0.5
SEMA3B-209ENST00000456560 WFDC5Q8TCV5 224 aa18.16■□□□□ 0.5
SEMA3B-209ENST00000456560 TMEM125Q96AQ2 219 aa18.16■□□□□ 0.5
SEMA3B-209ENST00000456560 GPR63Q9BZJ6 419 aa18.16■□□□□ 0.5
SEMA3B-209ENST00000456560 NOL11Q9H8H0 719 aaKnown RBP18.16■□□□□ 0.5
SEMA3B-209ENST00000456560 SARS2Q9NP81 518 aaKnown RBP18.16■□□□□ 0.5
SEMA3B-209ENST00000456560 PFDN4Q9NQP4 134 aa18.16■□□□□ 0.5
SEMA3B-209ENST00000456560 SLC30A1Q9Y6M5 507 aa18.16■□□□□ 0.5
SEMA3B-209ENST00000456560 PLXNA4Q9HCM2 1894 aa18.16■□□□□ 0.5
SEMA3B-209ENST00000456560 COL4A6Q14031 1691 aa18.15■□□□□ 0.5
SEMA3B-209ENST00000456560 PRMT5O14744 637 aaPredicted RBP18.15■□□□□ 0.5
SEMA3B-209ENST00000456560 TIPRLO75663 272 aa18.15■□□□□ 0.5
SEMA3B-209ENST00000456560 CTPS1P17812 591 aa18.15■□□□□ 0.5
SEMA3B-209ENST00000456560 ERVPABLB-1P60509 514 aa18.15■□□□□ 0.5
SEMA3B-209ENST00000456560 AP1S1P61966 158 aa18.15■□□□□ 0.5
SEMA3B-209ENST00000456560 ERVK-8P63133 956 aa18.15■□□□□ 0.5
SEMA3B-209ENST00000456560 VEPH1Q14D04 833 aa18.15■□□□□ 0.5
SEMA3B-209ENST00000456560 PCBP2Q15366 365 aaKnown RBP eCLIP18.15■□□□□ 0.5
SEMA3B-209ENST00000456560 NRF1Q16656 503 aa18.15■□□□□ 0.5
SEMA3B-209ENST00000456560 MYLK3Q32MK0 819 aa18.15■□□□□ 0.5
SEMA3B-209ENST00000456560 ARMC12Q5T9G4 340 aa18.15■□□□□ 0.5
SEMA3B-209ENST00000456560 CERS6Q6ZMG9 384 aa18.15■□□□□ 0.5
SEMA3B-209ENST00000456560 Q6ZNB5 142 aa18.15■□□□□ 0.5
SEMA3B-209ENST00000456560 ERMP1Q7Z2K6 904 aa18.15■□□□□ 0.5
SEMA3B-209ENST00000456560 FAM110BQ8TC76 370 aa18.15■□□□□ 0.5
SEMA3B-209ENST00000456560 GRIN3AQ8TCU5 1115 aa18.15■□□□□ 0.5
SEMA3B-209ENST00000456560 PRPF18Q99633 342 aaKnown RBP18.15■□□□□ 0.5
SEMA3B-209ENST00000456560 CCT7Q99832 543 aa18.15■□□□□ 0.5
SEMA3B-209ENST00000456560 TMEM45AQ9NWC5 275 aa18.15■□□□□ 0.5
SEMA3B-209ENST00000456560 ACTR3BQ9P1U1 418 aa18.15■□□□□ 0.5
SEMA3B-209ENST00000456560 PCDHB1Q9Y5F3 818 aa18.15■□□□□ 0.5
SEMA3B-209ENST00000456560 MICAL3Q7RTP6 2002 aa18.15■□□□□ 0.5
SEMA3B-209ENST00000456560 K7ERQ8 282 aa18.15■□□□□ 0.5
SEMA3B-209ENST00000456560 GAPDHSO14556 408 aaPredicted RBP18.15■□□□□ 0.5
SEMA3B-209ENST00000456560 HNRNPRO43390 633 aaKnown RBP18.15■□□□□ 0.5
SEMA3B-209ENST00000456560 EEDO75530 441 aaKnown RBP18.15■□□□□ 0.5
SEMA3B-209ENST00000456560 ALPIP09923 528 aa18.15■□□□□ 0.5
SEMA3B-209ENST00000456560 UFM1P61960 85 aa18.15■□□□□ 0.5
SEMA3B-209ENST00000456560 TXNL4AP83876 142 aaKnown RBP18.15■□□□□ 0.5
SEMA3B-209ENST00000456560 ZXDBP98169 803 aa18.15■□□□□ 0.5
SEMA3B-209ENST00000456560 RAB33AQ14088 237 aa18.15■□□□□ 0.5
SEMA3B-209ENST00000456560 C6orf136Q5SQH8 315 aa18.15■□□□□ 0.5
SEMA3B-209ENST00000456560 DEFB128Q7Z7B8 93 aa18.15■□□□□ 0.5
SEMA3B-209ENST00000456560 DCAF4L2Q8NA75 395 aa18.15■□□□□ 0.5
SEMA3B-209ENST00000456560 OR52B6Q8NGF0 335 aa18.15■□□□□ 0.5
SEMA3B-209ENST00000456560 ZFP28Q8NHY6 868 aa18.15■□□□□ 0.5
SEMA3B-209ENST00000456560 CCDC97Q96F63 343 aaPredicted RBP18.15■□□□□ 0.5
SEMA3B-209ENST00000456560 MYO19Q96H55 970 aa18.15■□□□□ 0.5
SEMA3B-209ENST00000456560 TRIM54Q9BYV2 358 aa18.15■□□□□ 0.5
SEMA3B-209ENST00000456560 TRIM15Q9C019 465 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms