RNA–Protein interactions for RNA: ENST00000455727.6

LDLR-202, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-202ENST00000455727 RFC2P35250 354 aa14.88□□□□□ -0.03
LDLR-202ENST00000455727 KCNK10P57789 538 aa14.88□□□□□ -0.03
LDLR-202ENST00000455727 SLC7A9P82251 487 aa14.88□□□□□ -0.03
LDLR-202ENST00000455727 MPPE1Q53F39 396 aa14.88□□□□□ -0.03
LDLR-202ENST00000455727 PTRHD1Q6GMV3 140 aaKnown RBP14.88□□□□□ -0.03
LDLR-202ENST00000455727 FRA10AC1Q70Z53 315 aa14.88□□□□□ -0.03
LDLR-202ENST00000455727 ARPINQ7Z6K5 226 aa14.88□□□□□ -0.03
LDLR-202ENST00000455727 CBARPQ8N350 705 aaPredicted RBP14.88□□□□□ -0.03
LDLR-202ENST00000455727 DDI1Q8WTU0 396 aa14.88□□□□□ -0.03
LDLR-202ENST00000455727 EME1Q96AY2 570 aa14.88□□□□□ -0.03
LDLR-202ENST00000455727 CIPCQ9C0C6 399 aa14.88□□□□□ -0.03
LDLR-202ENST00000455727 KIAA1522Q9P206 1035 aaPredicted RBP14.88□□□□□ -0.03
LDLR-202ENST00000455727 EVLQ9UI08 416 aaPredicted RBP14.88□□□□□ -0.03
LDLR-202ENST00000455727 TBX21Q9UL17 535 aa14.88□□□□□ -0.03
LDLR-202ENST00000455727 ASB1Q9Y576 335 aa14.88□□□□□ -0.03
LDLR-202ENST00000455727 PCDHA9Q9Y5H5 950 aa14.88□□□□□ -0.03
LDLR-202ENST00000455727 GPR39O43194 453 aa14.88□□□□□ -0.03
LDLR-202ENST00000455727 MAP3K13O43283 966 aa14.88□□□□□ -0.03
LDLR-202ENST00000455727 LILRB3O75022 631 aa14.88□□□□□ -0.03
LDLR-202ENST00000455727 EEDO75530 441 aaKnown RBP14.88□□□□□ -0.03
LDLR-202ENST00000455727 SLC22A3O75751 556 aa14.88□□□□□ -0.03
LDLR-202ENST00000455727 OR4F21O95013 312 aa14.88□□□□□ -0.03
LDLR-202ENST00000455727 NPPAP01160 153 aa14.88□□□□□ -0.03
LDLR-202ENST00000455727 ITGALP20701 1170 aa14.88□□□□□ -0.03
LDLR-202ENST00000455727 ZFP36L2P47974 494 aaKnown RBP14.88□□□□□ -0.03
LDLR-202ENST00000455727 RGS4P49798 205 aa14.88□□□□□ -0.03
LDLR-202ENST00000455727 CCNHP51946 323 aaPredicted RBP14.88□□□□□ -0.03
LDLR-202ENST00000455727 PTPN5P54829 565 aa14.88□□□□□ -0.03
LDLR-202ENST00000455727 ERVPABLB-1P60509 514 aa14.88□□□□□ -0.03
LDLR-202ENST00000455727 CREMQ03060 361 aa14.88□□□□□ -0.03
LDLR-202ENST00000455727 NFATC2Q13469 925 aa14.88□□□□□ -0.03
LDLR-202ENST00000455727 TRIM60Q495X7 471 aa14.88□□□□□ -0.03
LDLR-202ENST00000455727 LIN52Q52LA3 116 aa14.88□□□□□ -0.03
LDLR-202ENST00000455727 C6orf136Q5SQH8 315 aa14.88□□□□□ -0.03
LDLR-202ENST00000455727 C1orf53Q5VUE5 145 aa14.88□□□□□ -0.03
LDLR-202ENST00000455727 FAM151BQ6UXP7 276 aa14.88□□□□□ -0.03
LDLR-202ENST00000455727 CYP2R1Q6VVX0 501 aa14.88□□□□□ -0.03
LDLR-202ENST00000455727 CMTR2Q8IYT2 770 aaKnown RBP14.88□□□□□ -0.03
LDLR-202ENST00000455727 PDPRQ8NCN5 879 aa14.88□□□□□ -0.03
LDLR-202ENST00000455727 OR2T11Q8NH01 316 aa14.88□□□□□ -0.03
LDLR-202ENST00000455727 FIBINQ8TAL6 211 aa14.88□□□□□ -0.03
LDLR-202ENST00000455727 LRTOMTQ8WZ04 291 aa14.88□□□□□ -0.03
LDLR-202ENST00000455727 MUC13Q9H3R2 512 aa14.88□□□□□ -0.03
LDLR-202ENST00000455727 ASB8Q9H765 288 aa14.88□□□□□ -0.03
LDLR-202ENST00000455727 SLC24A3Q9HC58 644 aa14.88□□□□□ -0.03
LDLR-202ENST00000455727 CCM2LQ9NUG4 571 aaPredicted RBP14.88□□□□□ -0.03
LDLR-202ENST00000455727 ABCB8Q9NUT2 735 aa14.88□□□□□ -0.03
LDLR-202ENST00000455727 ACTR3BQ9P1U1 418 aa14.88□□□□□ -0.03
LDLR-202ENST00000455727 C1orf232A0A0U1RR37 186 aa14.87□□□□□ -0.03
LDLR-202ENST00000455727 DYTNA2CJ06 578 aa14.87□□□□□ -0.03
LDLR-202ENST00000455727 RAD51BO15315 384 aa14.87□□□□□ -0.03
LDLR-202ENST00000455727 TEX28O15482 410 aa14.87□□□□□ -0.03
LDLR-202ENST00000455727 GLUD1P00367 558 aa14.87□□□□□ -0.03
LDLR-202ENST00000455727 S100BP04271 92 aaPredicted RBP14.87□□□□□ -0.03
LDLR-202ENST00000455727 FESP07332 822 aa14.87□□□□□ -0.03
LDLR-202ENST00000455727 GPR33Q49SQ1 333 aa14.87□□□□□ -0.03
LDLR-202ENST00000455727 LCN8Q6JVE9 175 aa14.87□□□□□ -0.03
LDLR-202ENST00000455727 AUTS2Q8WXX7 1259 aa14.87□□□□□ -0.03
LDLR-202ENST00000455727 MRPS31Q92665 395 aaKnown RBP14.87□□□□□ -0.03
LDLR-202ENST00000455727 ESAMQ96AP7 390 aa14.87□□□□□ -0.03
LDLR-202ENST00000455727 ZNF597Q96LX8 424 aa14.87□□□□□ -0.03
LDLR-202ENST00000455727 ACOX2Q99424 681 aa14.87□□□□□ -0.03
LDLR-202ENST00000455727 ATP13A3Q9H7F0 1226 aa14.87□□□□□ -0.03
LDLR-202ENST00000455727 NOL11Q9H8H0 719 aaKnown RBP14.87□□□□□ -0.03
LDLR-202ENST00000455727 IL26Q9NPH9 171 aa14.87□□□□□ -0.03
LDLR-202ENST00000455727 CMTM6Q9NX76 183 aa14.87□□□□□ -0.03
LDLR-202ENST00000455727 UBAP1Q9NZ09 502 aa14.87□□□□□ -0.03
LDLR-202ENST00000455727 GRXCR2A6NFK2 248 aa14.87□□□□□ -0.03
LDLR-202ENST00000455727 FFAR2O15552 330 aa14.87□□□□□ -0.03
LDLR-202ENST00000455727 IGSF6O95976 241 aa14.87□□□□□ -0.03
LDLR-202ENST00000455727 DGKAP23743 735 aa14.87□□□□□ -0.03
LDLR-202ENST00000455727 GABRR2P28476 465 aa14.87□□□□□ -0.03
LDLR-202ENST00000455727 HNF1BP35680 557 aa14.87□□□□□ -0.03
LDLR-202ENST00000455727 CRY1Q16526 586 aa14.87□□□□□ -0.03
LDLR-202ENST00000455727 PITRM1Q5JRX3 1037 aa14.87□□□□□ -0.03
LDLR-202ENST00000455727 Q6ZSR9 355 aa14.87□□□□□ -0.03
LDLR-202ENST00000455727 AHI1Q8N157 1196 aa14.87□□□□□ -0.03
LDLR-202ENST00000455727 TMEM199Q8N511 208 aa14.87□□□□□ -0.03
LDLR-202ENST00000455727 CDYL2Q8N8U2 506 aa14.87□□□□□ -0.03
LDLR-202ENST00000455727 OR52B6Q8NGF0 335 aa14.87□□□□□ -0.03
LDLR-202ENST00000455727 LYSMD1Q96S90 227 aa14.87□□□□□ -0.03
LDLR-202ENST00000455727 RNF208Q9H0X6 261 aa14.87□□□□□ -0.03
LDLR-202ENST00000455727 IL1RL2Q9HB29 575 aa14.87□□□□□ -0.03
LDLR-202ENST00000455727 PTBP2Q9UKA9 531 aaKnown RBP14.87□□□□□ -0.03
LDLR-202ENST00000455727 OARD1Q9Y530 152 aa14.87□□□□□ -0.03
LDLR-202ENST00000455727 FAM234BA2RU67 622 aa14.86□□□□□ -0.03
LDLR-202ENST00000455727 AHCYL1O43865 530 aa14.86□□□□□ -0.03
LDLR-202ENST00000455727 ZNF821O75541 412 aaPredicted RBP14.86□□□□□ -0.03
LDLR-202ENST00000455727 PABPC4LP0CB38 370 aaKnown RBP14.86□□□□□ -0.03
LDLR-202ENST00000455727 BMP2P12643 396 aa14.86□□□□□ -0.03
LDLR-202ENST00000455727 ATP6V1B2P21281 511 aa14.86□□□□□ -0.03
LDLR-202ENST00000455727 ACRV1P26436 265 aa14.86□□□□□ -0.03
LDLR-202ENST00000455727 GRIA3P42263 894 aa14.86□□□□□ -0.03
LDLR-202ENST00000455727 POLR2JP52435 117 aaKnown RBP14.86□□□□□ -0.03
LDLR-202ENST00000455727 CREB5Q02930 508 aa14.86□□□□□ -0.03
LDLR-202ENST00000455727 LMAN2Q12907 356 aa14.86□□□□□ -0.03
LDLR-202ENST00000455727 ATP6AP1LQ52LC2 224 aa14.86□□□□□ -0.03
LDLR-202ENST00000455727 GRAMD4Q6IC98 578 aa14.86□□□□□ -0.03
LDLR-202ENST00000455727 LETMD1Q6P1Q0 360 aa14.86□□□□□ -0.03
LDLR-202ENST00000455727 METTL2BQ6P1Q9 378 aaKnown RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms