RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 SLC4A1P02730 911 aa22.77■■□□□ 1.24
PTPRA-208ENST00000455631 IDSP22304 550 aa22.77■■□□□ 1.24
PTPRA-208ENST00000455631 GPS2Q13227 327 aa22.77■■□□□ 1.24
PTPRA-208ENST00000455631 IZUMO3Q5VZ72 239 aa22.77■■□□□ 1.24
PTPRA-208ENST00000455631 TIGD7Q6NT04 549 aaPredicted RBP22.77■■□□□ 1.24
PTPRA-208ENST00000455631 TTC30BQ8N4P2 665 aa22.77■■□□□ 1.24
PTPRA-208ENST00000455631 ADAMTS17Q8TE56 1095 aa22.77■■□□□ 1.24
PTPRA-208ENST00000455631 MAML1Q92585 1016 aa22.77■■□□□ 1.24
PTPRA-208ENST00000455631 GLYATL1Q969I3 302 aa22.77■■□□□ 1.24
PTPRA-208ENST00000455631 SNRNP40Q96DI7 357 aaKnown RBP22.77■■□□□ 1.24
PTPRA-208ENST00000455631 ZSCAN5AQ9BUG6 496 aa22.77■■□□□ 1.24
PTPRA-208ENST00000455631 GPR83Q9NYM4 423 aa22.77■■□□□ 1.24
PTPRA-208ENST00000455631 SEMA5BQ9P283 1151 aa22.77■■□□□ 1.24
PTPRA-208ENST00000455631 MYO1AQ9UBC5 1043 aa22.77■■□□□ 1.24
PTPRA-208ENST00000455631 FTLP02792 175 aaPredicted RBP22.76■■□□□ 1.23
PTPRA-208ENST00000455631 HLA-DQB2P05538 268 aa22.76■■□□□ 1.23
PTPRA-208ENST00000455631 NIPAL4Q0D2K0 466 aa22.76■■□□□ 1.23
PTPRA-208ENST00000455631 KRT81Q14533 505 aa22.76■■□□□ 1.23
PTPRA-208ENST00000455631 ZRANB3Q5FWF4 1079 aa22.76■■□□□ 1.23
PTPRA-208ENST00000455631 TXNRD3NBQ6F5E7 133 aa22.76■■□□□ 1.23
PTPRA-208ENST00000455631 IRF2BP2Q7Z5L9 587 aa22.76■■□□□ 1.23
PTPRA-208ENST00000455631 ZNF547Q8IVP9 402 aa22.76■■□□□ 1.23
PTPRA-208ENST00000455631 IQCKQ8N0W5 287 aa22.76■■□□□ 1.23
PTPRA-208ENST00000455631 MAP3K3Q99759 626 aa22.76■■□□□ 1.23
PTPRA-208ENST00000455631 NUP62CLQ9H1M0 184 aa22.76■■□□□ 1.23
PTPRA-208ENST00000455631 CHST8Q9H2A9 424 aa22.76■■□□□ 1.23
PTPRA-208ENST00000455631 FANCLQ9NW38 375 aa22.76■■□□□ 1.23
PTPRA-208ENST00000455631 ANKRD66B4E2M5 251 aa22.75■■□□□ 1.23
PTPRA-208ENST00000455631 MATN3O15232 486 aa22.75■■□□□ 1.23
PTPRA-208ENST00000455631 CBX6O95503 412 aa22.75■■□□□ 1.23
PTPRA-208ENST00000455631 JCHAINP01591 159 aa22.75■■□□□ 1.23
PTPRA-208ENST00000455631 POU3F2P20265 443 aaPredicted RBP22.75■■□□□ 1.23
PTPRA-208ENST00000455631 HALP42357 657 aa22.75■■□□□ 1.23
PTPRA-208ENST00000455631 GALNT2Q10471 571 aa22.75■■□□□ 1.23
PTPRA-208ENST00000455631 RAPSNQ13702 412 aa22.75■■□□□ 1.23
PTPRA-208ENST00000455631 AGAP9Q5VTM2 703 aa22.75■■□□□ 1.23
PTPRA-208ENST00000455631 FAM69BQ5VUD6 431 aa22.75■■□□□ 1.23
PTPRA-208ENST00000455631 WASH2PQ6VEQ5 465 aa22.75■■□□□ 1.23
PTPRA-208ENST00000455631 TRAM1L1Q8N609 369 aa22.75■■□□□ 1.23
PTPRA-208ENST00000455631 ENDOVQ8N8Q3 282 aaKnown RBP22.75■■□□□ 1.23
PTPRA-208ENST00000455631 GPR26Q8NDV2 337 aa22.75■■□□□ 1.23
PTPRA-208ENST00000455631 ANKRD20A12PQ8NF67 263 aa22.75■■□□□ 1.23
PTPRA-208ENST00000455631 EID2BQ96D98 161 aa22.75■■□□□ 1.23
PTPRA-208ENST00000455631 NUP85Q9BW27 656 aa22.75■■□□□ 1.23
PTPRA-208ENST00000455631 ZFYVE1Q9HBF4 777 aa22.75■■□□□ 1.23
PTPRA-208ENST00000455631 ASF1BQ9NVP2 202 aa22.75■■□□□ 1.23
PTPRA-208ENST00000455631 WDR37Q9Y2I8 494 aa22.75■■□□□ 1.23
PTPRA-208ENST00000455631 PRRC2CQ9Y520 2896 aaKnown RBP22.74■■□□□ 1.23
PTPRA-208ENST00000455631 ANKRD17O75179 2603 aaKnown RBP22.74■■□□□ 1.23
PTPRA-208ENST00000455631 KLK3P07288 261 aaPredicted RBP22.74■■□□□ 1.23
PTPRA-208ENST00000455631 FECHP22830 423 aa22.74■■□□□ 1.23
PTPRA-208ENST00000455631 DCDC1P59894 354 aa22.74■■□□□ 1.23
PTPRA-208ENST00000455631 TUBB4BP68371 445 aa22.74■■□□□ 1.23
PTPRA-208ENST00000455631 MMRN1Q13201 1228 aa22.74■■□□□ 1.23
PTPRA-208ENST00000455631 TUBB2AQ13885 445 aa22.74■■□□□ 1.23
PTPRA-208ENST00000455631 ELOAQ14241 798 aaKnown RBP22.74■■□□□ 1.23
PTPRA-208ENST00000455631 GALNT3Q14435 633 aa22.74■■□□□ 1.23
PTPRA-208ENST00000455631 PLCL1Q15111 1095 aa22.74■■□□□ 1.23
PTPRA-208ENST00000455631 GPR19Q15760 415 aa22.74■■□□□ 1.23
PTPRA-208ENST00000455631 DNTTIP2Q5QJE6 756 aaKnown RBP22.74■■□□□ 1.23
PTPRA-208ENST00000455631 CCDC122Q5T0U0 273 aa22.74■■□□□ 1.23
PTPRA-208ENST00000455631 KLHL35Q6PF15 583 aa22.74■■□□□ 1.23
PTPRA-208ENST00000455631 ZNF517Q6ZMY9 492 aaPredicted RBP22.74■■□□□ 1.23
PTPRA-208ENST00000455631 KMT5CQ86Y97 462 aa22.74■■□□□ 1.23
PTPRA-208ENST00000455631 TTC13Q8NBP0 860 aa22.74■■□□□ 1.23
PTPRA-208ENST00000455631 GPR150Q8NGU9 434 aa22.74■■□□□ 1.23
PTPRA-208ENST00000455631 TEKT4Q8WW24 435 aa22.74■■□□□ 1.23
PTPRA-208ENST00000455631 ERGIC2Q96RQ1 377 aa22.74■■□□□ 1.23
PTPRA-208ENST00000455631 TUBB2BQ9BVA1 445 aa22.74■■□□□ 1.23
PTPRA-208ENST00000455631 MRPL47Q9HD33 250 aaKnown RBP22.74■■□□□ 1.23
PTPRA-208ENST00000455631 AMACRQ9UHK6 382 aa22.74■■□□□ 1.23
PTPRA-208ENST00000455631 UBA6A0AVT1 1052 aaPredicted RBP22.73■■□□□ 1.23
PTPRA-208ENST00000455631 ANKUB1A6NFN9 424 aa22.73■■□□□ 1.23
PTPRA-208ENST00000455631 TLCD2A6NGC4 264 aa22.73■■□□□ 1.23
PTPRA-208ENST00000455631 CDK14O94921 469 aa22.73■■□□□ 1.23
PTPRA-208ENST00000455631 VCLP18206 1134 aa22.73■■□□□ 1.23
PTPRA-208ENST00000455631 CD86P42081 329 aa22.73■■□□□ 1.23
PTPRA-208ENST00000455631 VAV2P52735 878 aa22.73■■□□□ 1.23
PTPRA-208ENST00000455631 ITGA1P56199 1179 aa22.73■■□□□ 1.23
PTPRA-208ENST00000455631 HSD11B2P80365 405 aa22.73■■□□□ 1.23
PTPRA-208ENST00000455631 PDPK2PQ6A1A2 396 aa22.73■■□□□ 1.23
PTPRA-208ENST00000455631 TRAPPC5Q8IUR0 188 aa22.73■■□□□ 1.23
PTPRA-208ENST00000455631 CISD2Q8N5K1 135 aaKnown RBP22.73■■□□□ 1.23
PTPRA-208ENST00000455631 TMEM102Q8N9M5 508 aaPredicted RBP22.73■■□□□ 1.23
PTPRA-208ENST00000455631 SLC38A9Q8NBW4 561 aa22.73■■□□□ 1.23
PTPRA-208ENST00000455631 LRRN4Q8WUT4 740 aa22.73■■□□□ 1.23
PTPRA-208ENST00000455631 SMAD5Q99717 465 aaKnown RBP22.73■■□□□ 1.23
PTPRA-208ENST00000455631 ADGRE3Q9BY15 652 aa22.73■■□□□ 1.23
PTPRA-208ENST00000455631 TCFL5Q9UL49 500 aa22.73■■□□□ 1.23
PTPRA-208ENST00000455631 SHOC2Q9UQ13 582 aa22.73■■□□□ 1.23
PTPRA-208ENST00000455631 VEGFDO43915 354 aa22.72■■□□□ 1.23
PTPRA-208ENST00000455631 RRADP55042 308 aa22.72■■□□□ 1.23
PTPRA-208ENST00000455631 GSDMDP57764 484 aa22.72■■□□□ 1.23
PTPRA-208ENST00000455631 CDK18Q07002 472 aa22.72■■□□□ 1.23
PTPRA-208ENST00000455631 IFI16Q16666 785 aaKnown RBP22.72■■□□□ 1.23
PTPRA-208ENST00000455631 PLEKHN1Q494U1 663 aaPredicted RBP22.72■■□□□ 1.23
PTPRA-208ENST00000455631 KHDC1Q4VXA5 237 aaKnown RBP22.72■■□□□ 1.23
PTPRA-208ENST00000455631 NCBP2-AS2Q69YL0 99 aa22.72■■□□□ 1.23
PTPRA-208ENST00000455631 LCN10Q6JVE6 187 aa22.72■■□□□ 1.23
PTPRA-208ENST00000455631 MED25Q71SY5 747 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms