RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 ARHGEF3Q9NR81 526 aa6.75□□□□□ -1.33
ECHDC1-210ENST00000454859 ZNF358Q9NW07 568 aa6.75□□□□□ -1.33
ECHDC1-210ENST00000454859 CDYLQ9Y232 598 aa6.75□□□□□ -1.33
ECHDC1-210ENST00000454859 MTCH2Q9Y6C9 303 aa6.75□□□□□ -1.33
ECHDC1-210ENST00000454859 MYO7AQ13402 2215 aa6.75□□□□□ -1.33
ECHDC1-210ENST00000454859 LRRK1Q38SD2 2015 aa6.75□□□□□ -1.33
ECHDC1-210ENST00000454859 PABPN1LA6NDY0 278 aaKnown RBP6.75□□□□□ -1.33
ECHDC1-210ENST00000454859 CAPN14A8MX76 684 aa6.75□□□□□ -1.33
ECHDC1-210ENST00000454859 PRRT4C9JH25 899 aa6.75□□□□□ -1.33
ECHDC1-210ENST00000454859 SCAMP3O14828 347 aaKnown RBP6.75□□□□□ -1.33
ECHDC1-210ENST00000454859 GIPC1O14908 333 aa6.75□□□□□ -1.33
ECHDC1-210ENST00000454859 HGSO14964 777 aaPredicted RBP6.75□□□□□ -1.33
ECHDC1-210ENST00000454859 SNX2O60749 519 aa6.75□□□□□ -1.33
ECHDC1-210ENST00000454859 SLCO2B1O94956 709 aa6.75□□□□□ -1.33
ECHDC1-210ENST00000454859 CHEK2O96017 543 aa6.75□□□□□ -1.33
ECHDC1-210ENST00000454859 CTSLP07711 333 aa6.75□□□□□ -1.33
ECHDC1-210ENST00000454859 ADRB3P13945 408 aa6.75□□□□□ -1.33
ECHDC1-210ENST00000454859 MTHFD2P13995 350 aa6.75□□□□□ -1.33
ECHDC1-210ENST00000454859 AOAHP28039 575 aa6.75□□□□□ -1.33
ECHDC1-210ENST00000454859 PTPN4P29074 926 aa6.75□□□□□ -1.33
ECHDC1-210ENST00000454859 GDI1P31150 447 aa6.75□□□□□ -1.33
ECHDC1-210ENST00000454859 NUDT1P36639 197 aa6.75□□□□□ -1.33
ECHDC1-210ENST00000454859 SPATS1Q496A3 300 aa6.75□□□□□ -1.33
ECHDC1-210ENST00000454859 ZNF776Q68DI1 518 aaPredicted RBP6.75□□□□□ -1.33
ECHDC1-210ENST00000454859 KIAA1161Q6NSJ0 714 aa6.75□□□□□ -1.33
ECHDC1-210ENST00000454859 USP30Q70CQ3 517 aa6.75□□□□□ -1.33
ECHDC1-210ENST00000454859 C12orf40Q86WS4 652 aa6.75□□□□□ -1.33
ECHDC1-210ENST00000454859 FAM9CQ8IZT9 166 aa6.75□□□□□ -1.33
ECHDC1-210ENST00000454859 CYB5D2Q8WUJ1 264 aa6.75□□□□□ -1.33
ECHDC1-210ENST00000454859 ATL1Q8WXF7 558 aa6.75□□□□□ -1.33
ECHDC1-210ENST00000454859 GLMNQ92990 594 aa6.75□□□□□ -1.33
ECHDC1-210ENST00000454859 GLYATL1Q969I3 302 aa6.75□□□□□ -1.33
ECHDC1-210ENST00000454859 ERP27Q96DN0 273 aa6.75□□□□□ -1.33
ECHDC1-210ENST00000454859 LINGO1Q96FE5 620 aa6.75□□□□□ -1.33
ECHDC1-210ENST00000454859 METTL2AQ96IZ6 378 aaKnown RBP6.75□□□□□ -1.33
ECHDC1-210ENST00000454859 RMDN2Q96LZ7 410 aa6.75□□□□□ -1.33
ECHDC1-210ENST00000454859 SPATA16Q9BXB7 569 aa6.75□□□□□ -1.33
ECHDC1-210ENST00000454859 C12orf65Q9H3J6 166 aaKnown RBP6.75□□□□□ -1.33
ECHDC1-210ENST00000454859 GSTO2Q9H4Y5 243 aa6.75□□□□□ -1.33
ECHDC1-210ENST00000454859 ALG9Q9H6U8 611 aa6.75□□□□□ -1.33
ECHDC1-210ENST00000454859 BPIFA1Q9NP55 256 aa6.75□□□□□ -1.33
ECHDC1-210ENST00000454859 ABCF3Q9NUQ8 709 aa6.75□□□□□ -1.33
ECHDC1-210ENST00000454859 CPSF2Q9P2I0 782 aaKnown RBP6.75□□□□□ -1.33
ECHDC1-210ENST00000454859 DCTN4Q9UJW0 460 aa6.75□□□□□ -1.33
ECHDC1-210ENST00000454859 FZD4Q9ULV1 537 aa6.75□□□□□ -1.33
ECHDC1-210ENST00000454859 FAM50BQ9Y247 325 aa6.75□□□□□ -1.33
ECHDC1-210ENST00000454859 TICRRQ7Z2Z1 1910 aa6.74□□□□□ -1.33
ECHDC1-210ENST00000454859 TCF20Q9UGU0 1960 aaKnown RBP6.74□□□□□ -1.33
ECHDC1-210ENST00000454859 SERTM1A2A2V5 107 aa6.74□□□□□ -1.33
ECHDC1-210ENST00000454859 DYTNA2CJ06 578 aa6.74□□□□□ -1.33
ECHDC1-210ENST00000454859 FCHO1O14526 889 aa6.74□□□□□ -1.33
ECHDC1-210ENST00000454859 LIN7AO14910 233 aaPredicted RBP6.74□□□□□ -1.33
ECHDC1-210ENST00000454859 BUD23O43709 281 aaKnown RBP6.74□□□□□ -1.33
ECHDC1-210ENST00000454859 ITM2AO43736 263 aa6.74□□□□□ -1.33
ECHDC1-210ENST00000454859 ZBTB14O43829 449 aa6.74□□□□□ -1.33
ECHDC1-210ENST00000454859 SYNCRIPO60506 623 aaKnown RBP6.74□□□□□ -1.33
ECHDC1-210ENST00000454859 UGDHO60701 494 aa6.74□□□□□ -1.33
ECHDC1-210ENST00000454859 ATG13O75143 517 aa6.74□□□□□ -1.33
ECHDC1-210ENST00000454859 KATNA1O75449 491 aa6.74□□□□□ -1.33
ECHDC1-210ENST00000454859 WDR47O94967 919 aa6.74□□□□□ -1.33
ECHDC1-210ENST00000454859 SLC25A14O95258 325 aaPredicted RBP6.74□□□□□ -1.33
ECHDC1-210ENST00000454859 SLC4A1P02730 911 aa6.74□□□□□ -1.33
ECHDC1-210ENST00000454859 GFAPP14136 432 aa6.74□□□□□ -1.33
ECHDC1-210ENST00000454859 GLRBP48167 497 aa6.74□□□□□ -1.33
ECHDC1-210ENST00000454859 PRLHRP49683 370 aa6.74□□□□□ -1.33
ECHDC1-210ENST00000454859 PNLIPRP1P54315 467 aa6.74□□□□□ -1.33
ECHDC1-210ENST00000454859 TUBB3Q13509 450 aa6.74□□□□□ -1.33
ECHDC1-210ENST00000454859 PTPRCAPQ14761 206 aa6.74□□□□□ -1.33
ECHDC1-210ENST00000454859 STARD3Q14849 445 aa6.74□□□□□ -1.33
ECHDC1-210ENST00000454859 ATP13A5Q4VNC0 1218 aa6.74□□□□□ -1.33
ECHDC1-210ENST00000454859 TRIM68Q6AZZ1 485 aa6.74□□□□□ -1.33
ECHDC1-210ENST00000454859 NAPRTQ6XQN6 538 aa6.74□□□□□ -1.33
ECHDC1-210ENST00000454859 CHSY3Q70JA7 882 aa6.74□□□□□ -1.33
ECHDC1-210ENST00000454859 PARS2Q7L3T8 475 aaKnown RBP6.74□□□□□ -1.33
ECHDC1-210ENST00000454859 LPCAT2Q7L5N7 544 aa6.74□□□□□ -1.33
ECHDC1-210ENST00000454859 MTDHQ86UE4 582 aaKnown RBP6.74□□□□□ -1.33
ECHDC1-210ENST00000454859 KBTBD6Q86V97 674 aa6.74□□□□□ -1.33
ECHDC1-210ENST00000454859 LSMEM2Q8N112 164 aa6.74□□□□□ -1.33
ECHDC1-210ENST00000454859 SYNPOQ8N3V7 929 aa6.74□□□□□ -1.33
ECHDC1-210ENST00000454859 TTC16Q8NEE8 873 aa6.74□□□□□ -1.33
ECHDC1-210ENST00000454859 OR6K2Q8NGY2 324 aa6.74□□□□□ -1.33
ECHDC1-210ENST00000454859 OR2T3Q8NH03 318 aa6.74□□□□□ -1.33
ECHDC1-210ENST00000454859 FAM174AQ8TBP5 190 aa6.74□□□□□ -1.33
ECHDC1-210ENST00000454859 PTERQ96BW5 349 aa6.74□□□□□ -1.33
ECHDC1-210ENST00000454859 RILPQ96NA2 401 aa6.74□□□□□ -1.33
ECHDC1-210ENST00000454859 SLC12A9Q9BXP2 914 aa6.74□□□□□ -1.33
ECHDC1-210ENST00000454859 ABCG8Q9H221 673 aa6.74□□□□□ -1.33
ECHDC1-210ENST00000454859 COG4Q9H9E3 785 aa6.74□□□□□ -1.33
ECHDC1-210ENST00000454859 CERS4Q9HA82 394 aa6.74□□□□□ -1.33
ECHDC1-210ENST00000454859 PREBQ9HCU5 417 aa6.74□□□□□ -1.33
ECHDC1-210ENST00000454859 MRPL40Q9NQ50 206 aaKnown RBP6.74□□□□□ -1.33
ECHDC1-210ENST00000454859 TCF7L2Q9NQB0 619 aa6.74□□□□□ -1.33
ECHDC1-210ENST00000454859 PRSS16Q9NQE7 514 aa6.74□□□□□ -1.33
ECHDC1-210ENST00000454859 TAGLN3Q9UI15 199 aa6.74□□□□□ -1.33
ECHDC1-210ENST00000454859 PTBP2Q9UKA9 531 aaKnown RBP6.74□□□□□ -1.33
ECHDC1-210ENST00000454859 STON1Q9Y6Q2 735 aa6.74□□□□□ -1.33
ECHDC1-210ENST00000454859 GFYI3L273 518 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 BTN3A1O00481 513 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 CCL22O00626 93 aa6.73□□□□□ -1.33
ECHDC1-210ENST00000454859 NIPSNAP2O75323 286 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms