RNA–Protein interactions for RNA: ENST00000454849.5

MSH2-203, Transcript of mutS homolog 2, humanhuman

TSL 4

Gene MSH2, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-203ENST00000454849 FBXO39Q8N4B4 442 aa24.46■■□□□ 1.51
MSH2-203ENST00000454849 RCBTB1Q8NDN9 531 aa24.46■■□□□ 1.51
MSH2-203ENST00000454849 MAIP1Q8WWC4 291 aa24.46■■□□□ 1.51
MSH2-203ENST00000454849 ANP32BQ92688 251 aaKnown RBP24.46■■□□□ 1.51
MSH2-203ENST00000454849 FGF11Q92914 225 aa24.46■■□□□ 1.51
MSH2-203ENST00000454849 TMEM74Q96NL1 305 aa24.46■■□□□ 1.51
MSH2-203ENST00000454849 TBC1D10AQ9BXI6 508 aa24.46■■□□□ 1.51
MSH2-203ENST00000454849 ZCCHC2Q9C0B9 1178 aaKnown RBP24.46■■□□□ 1.51
MSH2-203ENST00000454849 STRADBQ9C0K7 418 aa24.46■■□□□ 1.51
MSH2-203ENST00000454849 ZMYND15Q9H091 742 aa24.46■■□□□ 1.51
MSH2-203ENST00000454849 SMOXQ9NWM0 555 aa24.46■■□□□ 1.51
MSH2-203ENST00000454849 PAK5Q9P286 719 aa24.46■■□□□ 1.51
MSH2-203ENST00000454849 ZNF624Q9P2J8 865 aaPredicted RBP24.46■■□□□ 1.51
MSH2-203ENST00000454849 PSMD13Q9UNM6 376 aa24.46■■□□□ 1.51
MSH2-203ENST00000454849 DRG1Q9Y295 367 aaKnown RBP24.46■■□□□ 1.51
MSH2-203ENST00000454849 WDR37Q9Y2I8 494 aa24.46■■□□□ 1.51
MSH2-203ENST00000454849 BPTFQ12830 3046 aa24.45■■□□□ 1.51
MSH2-203ENST00000454849 OR51F1A6NGY5 319 aa24.45■■□□□ 1.5
MSH2-203ENST00000454849 OR52A4PA6NMU1 304 aa24.45■■□□□ 1.5
MSH2-203ENST00000454849 USP27XA6NNY8 438 aa24.45■■□□□ 1.5
MSH2-203ENST00000454849 ZSCAN12O43309 604 aa24.45■■□□□ 1.5
MSH2-203ENST00000454849 BRAFP15056 766 aa24.45■■□□□ 1.5
MSH2-203ENST00000454849 ITPKBP27987 946 aa24.45■■□□□ 1.5
MSH2-203ENST00000454849 RBMS1P29558 406 aaKnown RBP24.45■■□□□ 1.5
MSH2-203ENST00000454849 EIF2S3P41091 472 aaKnown RBP24.45■■□□□ 1.5
MSH2-203ENST00000454849 SLC19A1P41440 591 aa24.45■■□□□ 1.5
MSH2-203ENST00000454849 ARSDP51689 593 aa24.45■■□□□ 1.5
MSH2-203ENST00000454849 CLCNKAP51800 687 aa24.45■■□□□ 1.5
MSH2-203ENST00000454849 NFE2L1Q14494 772 aa24.45■■□□□ 1.5
MSH2-203ENST00000454849 LINC00523Q86TU6 105 aa24.45■■□□□ 1.5
MSH2-203ENST00000454849 AMZ2Q86W34 360 aa24.45■■□□□ 1.5
MSH2-203ENST00000454849 SLITRK4Q8IW52 837 aa24.45■■□□□ 1.5
MSH2-203ENST00000454849 COG1Q8WTW3 980 aa24.45■■□□□ 1.5
MSH2-203ENST00000454849 GRAMD1AQ96CP6 724 aa24.45■■□□□ 1.5
MSH2-203ENST00000454849 AHCYL2Q96HN2 611 aaKnown RBP24.45■■□□□ 1.5
MSH2-203ENST00000454849 SLC46A1Q96NT5 459 aa24.45■■□□□ 1.5
MSH2-203ENST00000454849 SARS2Q9NP81 518 aaKnown RBP24.45■■□□□ 1.5
MSH2-203ENST00000454849 ASCL3Q9NQ33 180 aa24.45■■□□□ 1.5
MSH2-203ENST00000454849 NLE1Q9NVX2 485 aaPredicted RBP24.45■■□□□ 1.5
MSH2-203ENST00000454849 PISDQ9UG56 409 aa24.45■■□□□ 1.5
MSH2-203ENST00000454849 SLC30A1Q9Y6M5 507 aa24.45■■□□□ 1.5
MSH2-203ENST00000454849 KIR2DS5A0A0G2JLQ3 304 aa24.44■■□□□ 1.5
MSH2-203ENST00000454849 A0A0G2JNG1 304 aa24.44■■□□□ 1.5
MSH2-203ENST00000454849 KIR2DS3K7RE56 304 aa24.44■■□□□ 1.5
MSH2-203ENST00000454849 ITGALP20701 1170 aa24.44■■□□□ 1.5
MSH2-203ENST00000454849 IDSP22304 550 aa24.44■■□□□ 1.5
MSH2-203ENST00000454849 HADHAP40939 763 aa24.44■■□□□ 1.5
MSH2-203ENST00000454849 VPS41P49754 854 aa24.44■■□□□ 1.5
MSH2-203ENST00000454849 SEMA5AQ13591 1074 aa24.44■■□□□ 1.5
MSH2-203ENST00000454849 KIR2DS5Q14953 304 aa24.44■■□□□ 1.5
MSH2-203ENST00000454849 CLCA4Q14CN2 919 aa24.44■■□□□ 1.5
MSH2-203ENST00000454849 SNAP47Q5SQN1 464 aa24.44■■□□□ 1.5
MSH2-203ENST00000454849 DRICH1Q6PGQ1 229 aaPredicted RBP24.44■■□□□ 1.5
MSH2-203ENST00000454849 SNX20Q7Z614 316 aa24.44■■□□□ 1.5
MSH2-203ENST00000454849 TRIM48Q8IWZ4 208 aa24.44■■□□□ 1.5
MSH2-203ENST00000454849 DCUN1D1Q96GG9 259 aa24.44■■□□□ 1.5
MSH2-203ENST00000454849 LIN37Q96GY3 246 aaPredicted RBP24.44■■□□□ 1.5
MSH2-203ENST00000454849 CRELD1Q96HD1 420 aa24.44■■□□□ 1.5
MSH2-203ENST00000454849 CDKN2AIPNLQ96HQ2 116 aa24.44■■□□□ 1.5
MSH2-203ENST00000454849 CCDC74BQ96LY2 380 aa24.44■■□□□ 1.5
MSH2-203ENST00000454849 SLC2A6Q9UGQ3 507 aa24.44■■□□□ 1.5
MSH2-203ENST00000454849 LOXL2Q9Y4K0 774 aa24.44■■□□□ 1.5
MSH2-203ENST00000454849 IGHV5-10-1A0A0J9YXX1 117 aa24.43■■□□□ 1.5
MSH2-203ENST00000454849 PRR19A6NJB7 356 aa24.43■■□□□ 1.5
MSH2-203ENST00000454849 PLD2O14939 933 aa24.43■■□□□ 1.5
MSH2-203ENST00000454849 SUN1O94901 812 aa24.43■■□□□ 1.5
MSH2-203ENST00000454849 SLC2A4P14672 509 aa24.43■■□□□ 1.5
MSH2-203ENST00000454849 ITIH1P19827 911 aa24.43■■□□□ 1.5
MSH2-203ENST00000454849 CCKBRP32239 447 aa24.43■■□□□ 1.5
MSH2-203ENST00000454849 UBE2IP63279 158 aaKnown RBP24.43■■□□□ 1.5
MSH2-203ENST00000454849 BASP1P80723 227 aaKnown RBP24.43■■□□□ 1.5
MSH2-203ENST00000454849 CDH17Q12864 832 aa24.43■■□□□ 1.5
MSH2-203ENST00000454849 C16orf72Q14CZ0 275 aa24.43■■□□□ 1.5
MSH2-203ENST00000454849 TTC27Q6P3X3 843 aa24.43■■□□□ 1.5
MSH2-203ENST00000454849 JAMLQ86YT9 394 aa24.43■■□□□ 1.5
MSH2-203ENST00000454849 PIANPQ8IYJ0 282 aa24.43■■□□□ 1.5
MSH2-203ENST00000454849 NXPE1Q8N323 547 aa24.43■■□□□ 1.5
MSH2-203ENST00000454849 NCSTNQ92542 709 aa24.43■■□□□ 1.5
MSH2-203ENST00000454849 TTC7AQ9ULT0 858 aaPredicted RBP24.43■■□□□ 1.5
MSH2-203ENST00000454849 ZKSCAN5Q9Y2L8 839 aa24.43■■□□□ 1.5
MSH2-203ENST00000454849 MROH6A6NGR9 719 aa24.42■■□□□ 1.5
MSH2-203ENST00000454849 ERI2A8K979 691 aaKnown RBP24.42■■□□□ 1.5
MSH2-203ENST00000454849 A8MU76 341 aa24.42■■□□□ 1.5
MSH2-203ENST00000454849 TMX2-CTNND1H3BSU7 103 aa24.42■■□□□ 1.5
MSH2-203ENST00000454849 ZW10O43264 779 aa24.42■■□□□ 1.5
MSH2-203ENST00000454849 SGTAO43765 313 aa24.42■■□□□ 1.5
MSH2-203ENST00000454849 VIPP01282 170 aa24.42■■□□□ 1.5
MSH2-203ENST00000454849 VCLP18206 1134 aa24.42■■□□□ 1.5
MSH2-203ENST00000454849 ETV5P41161 510 aa24.42■■□□□ 1.5
MSH2-203ENST00000454849 SESN2P58004 480 aaPredicted RBP24.42■■□□□ 1.5
MSH2-203ENST00000454849 COL28A1Q2UY09 1125 aa24.42■■□□□ 1.5
MSH2-203ENST00000454849 SERPINA9Q86WD7 417 aa24.42■■□□□ 1.5
MSH2-203ENST00000454849 LSMEM2Q8N112 164 aa24.42■■□□□ 1.5
MSH2-203ENST00000454849 OR10G6Q8NH81 332 aa24.42■■□□□ 1.5
MSH2-203ENST00000454849 STYXQ8WUJ0 223 aa24.42■■□□□ 1.5
MSH2-203ENST00000454849 JPH3Q8WXH2 748 aaPredicted RBP24.42■■□□□ 1.5
MSH2-203ENST00000454849 PBKQ96KB5 322 aa24.42■■□□□ 1.5
MSH2-203ENST00000454849 ZNF778Q96MU6 729 aa24.42■■□□□ 1.5
MSH2-203ENST00000454849 STN1Q9H668 368 aaKnown RBP24.42■■□□□ 1.5
MSH2-203ENST00000454849 CASS4Q9NQ75 786 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms