RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 C11orf96Q7Z7L8 435 aa19.65■□□□□ 0.74
COL9A3-202ENST00000452372 TRAPPC5Q8IUR0 188 aa19.65■□□□□ 0.74
COL9A3-202ENST00000452372 NAGSQ8N159 534 aa19.65■□□□□ 0.74
COL9A3-202ENST00000452372 DCBLD1Q8N8Z6 715 aa19.65■□□□□ 0.74
COL9A3-202ENST00000452372 HEXDCQ8WVB3 486 aa19.65■□□□□ 0.74
COL9A3-202ENST00000452372 CRELD1Q96HD1 420 aa19.65■□□□□ 0.74
COL9A3-202ENST00000452372 ZNF514Q96K75 400 aaPredicted RBP19.65■□□□□ 0.74
COL9A3-202ENST00000452372 TIMM29Q9BSF4 260 aa19.65■□□□□ 0.74
COL9A3-202ENST00000452372 NRSN2Q9GZP1 204 aa19.65■□□□□ 0.74
COL9A3-202ENST00000452372 CHRAC1Q9NRG0 131 aa19.65■□□□□ 0.74
COL9A3-202ENST00000452372 KLC4Q9NSK0 619 aa19.65■□□□□ 0.74
COL9A3-202ENST00000452372 SLC2A6Q9UGQ3 507 aa19.65■□□□□ 0.74
COL9A3-202ENST00000452372 KCNK6Q9Y257 313 aa19.65■□□□□ 0.74
COL9A3-202ENST00000452372 DNMT3AQ9Y6K1 912 aaPredicted RBP19.65■□□□□ 0.74
COL9A3-202ENST00000452372 CCDC162PA2VCL2 907 aa19.64■□□□□ 0.73
COL9A3-202ENST00000452372 KCNJ13O60928 360 aa19.64■□□□□ 0.73
COL9A3-202ENST00000452372 TMEM63AO94886 807 aa19.64■□□□□ 0.73
COL9A3-202ENST00000452372 GLB1P16278 677 aa19.64■□□□□ 0.73
COL9A3-202ENST00000452372 MGAT1P26572 445 aa19.64■□□□□ 0.73
COL9A3-202ENST00000452372 CDKN1CP49918 316 aaPredicted RBP19.64■□□□□ 0.73
COL9A3-202ENST00000452372 CTSCP53634 463 aa19.64■□□□□ 0.73
COL9A3-202ENST00000452372 CRADDP78560 199 aa19.64■□□□□ 0.73
COL9A3-202ENST00000452372 HLTFQ14527 1009 aaKnown RBP eCLIP19.64■□□□□ 0.73
COL9A3-202ENST00000452372 INSCQ1MX18 579 aa19.64■□□□□ 0.73
COL9A3-202ENST00000452372 ARMC3Q5W041 872 aa19.64■□□□□ 0.73
COL9A3-202ENST00000452372 TMEM220Q6QAJ8 160 aa19.64■□□□□ 0.73
COL9A3-202ENST00000452372 CAND1Q86VP6 1230 aaKnown RBP19.64■□□□□ 0.73
COL9A3-202ENST00000452372 SERPINA9Q86WD7 417 aa19.64■□□□□ 0.73
COL9A3-202ENST00000452372 NAT8LQ8N9F0 302 aa19.64■□□□□ 0.73
COL9A3-202ENST00000452372 HDAC10Q969S8 669 aa19.64■□□□□ 0.73
COL9A3-202ENST00000452372 COPS8Q99627 209 aa19.64■□□□□ 0.73
COL9A3-202ENST00000452372 XAB2Q9HCS7 855 aaKnown RBP19.64■□□□□ 0.73
COL9A3-202ENST00000452372 ZDHHC3Q9NYG2 299 aa19.64■□□□□ 0.73
COL9A3-202ENST00000452372 ASIC3Q9UHC3 531 aa19.64■□□□□ 0.73
COL9A3-202ENST00000452372 IGLV3-16A0A075B6K0 115 aa19.63■□□□□ 0.73
COL9A3-202ENST00000452372 PRR19A6NJB7 356 aa19.63■□□□□ 0.73
COL9A3-202ENST00000452372 NUDT21O43809 227 aaKnown RBP19.63■□□□□ 0.73
COL9A3-202ENST00000452372 OPA1O60313 960 aa19.63■□□□□ 0.73
COL9A3-202ENST00000452372 PRSS56P0CW18 603 aa19.63■□□□□ 0.73
COL9A3-202ENST00000452372 RALBP11234 206 aa19.63■□□□□ 0.73
COL9A3-202ENST00000452372 PNLIPP16233 465 aa19.63■□□□□ 0.73
COL9A3-202ENST00000452372 ACRV1P26436 265 aa19.63■□□□□ 0.73
COL9A3-202ENST00000452372 B4GALNT1Q00973 533 aa19.63■□□□□ 0.73
COL9A3-202ENST00000452372 DR1Q01658 176 aa19.63■□□□□ 0.73
COL9A3-202ENST00000452372 COL9A2Q14055 689 aaPredicted RBP19.63■□□□□ 0.73
COL9A3-202ENST00000452372 CDCP2Q5VXM1 449 aa19.63■□□□□ 0.73
COL9A3-202ENST00000452372 MICALCLQ6ZW33 695 aa19.63■□□□□ 0.73
COL9A3-202ENST00000452372 TAS2R42Q7RTR8 314 aa19.63■□□□□ 0.73
COL9A3-202ENST00000452372 PPIL6Q8IXY8 311 aa19.63■□□□□ 0.73
COL9A3-202ENST00000452372 PIANPQ8IYJ0 282 aa19.63■□□□□ 0.73
COL9A3-202ENST00000452372 ARL14Q8N4G2 192 aa19.63■□□□□ 0.73
COL9A3-202ENST00000452372 PATE1Q8WXA2 126 aa19.63■□□□□ 0.73
COL9A3-202ENST00000452372 NXPE2Q96DL1 559 aa19.63■□□□□ 0.73
COL9A3-202ENST00000452372 TRIM44Q96DX7 344 aaPredicted RBP19.63■□□□□ 0.73
COL9A3-202ENST00000452372 SGF29Q96ES7 293 aa19.63■□□□□ 0.73
COL9A3-202ENST00000452372 DCUN1D1Q96GG9 259 aa19.63■□□□□ 0.73
COL9A3-202ENST00000452372 SGSM3Q96HU1 749 aa19.63■□□□□ 0.73
COL9A3-202ENST00000452372 C16orf45Q96MC5 204 aaPredicted RBP19.63■□□□□ 0.73
COL9A3-202ENST00000452372 KIFC1Q9BW19 673 aa19.63■□□□□ 0.73
COL9A3-202ENST00000452372 ABCG4Q9H172 646 aa19.63■□□□□ 0.73
COL9A3-202ENST00000452372 MRM3Q9HC36 420 aaKnown RBP19.63■□□□□ 0.73
COL9A3-202ENST00000452372 SYBUQ9NX95 663 aa19.63■□□□□ 0.73
COL9A3-202ENST00000452372 TBC1D29Q9UFV1 150 aa19.63■□□□□ 0.73
COL9A3-202ENST00000452372 UNC13CQ8NB66 2214 aa19.62■□□□□ 0.73
COL9A3-202ENST00000452372 A6NCN8 305 aa19.62■□□□□ 0.73
COL9A3-202ENST00000452372 OR51F1A6NGY5 319 aa19.62■□□□□ 0.73
COL9A3-202ENST00000452372 OR2AG2A6NM03 316 aa19.62■□□□□ 0.73
COL9A3-202ENST00000452372 CFAP99D6REC4 459 aa19.62■□□□□ 0.73
COL9A3-202ENST00000452372 DNALI1O14645 258 aaPredicted RBP19.62■□□□□ 0.73
COL9A3-202ENST00000452372 AVILO75366 819 aa19.62■□□□□ 0.73
COL9A3-202ENST00000452372 POP7O75817 140 aaKnown RBP19.62■□□□□ 0.73
COL9A3-202ENST00000452372 EML2O95834 649 aa19.62■□□□□ 0.73
COL9A3-202ENST00000452372 MT-CO3P00414 261 aa19.62■□□□□ 0.73
COL9A3-202ENST00000452372 IVDP26440 423 aa19.62■□□□□ 0.73
COL9A3-202ENST00000452372 FOXN2P32314 431 aa19.62■□□□□ 0.73
COL9A3-202ENST00000452372 PLA2G4EQ3MJ16 856 aa19.62■□□□□ 0.73
COL9A3-202ENST00000452372 RNASEH2BQ5TBB1 312 aaKnown RBP19.62■□□□□ 0.73
COL9A3-202ENST00000452372 PCGF5Q86SE9 256 aa19.62■□□□□ 0.73
COL9A3-202ENST00000452372 AMZ2Q86W34 360 aa19.62■□□□□ 0.73
COL9A3-202ENST00000452372 SPATA4Q8NEY3 305 aa19.62■□□□□ 0.73
COL9A3-202ENST00000452372 OR4L1Q8NH43 312 aa19.62■□□□□ 0.73
COL9A3-202ENST00000452372 MAPK15Q8TD08 544 aa19.62■□□□□ 0.73
COL9A3-202ENST00000452372 CCDC74AQ96AQ1 378 aa19.62■□□□□ 0.73
COL9A3-202ENST00000452372 SERPINB12Q96P63 405 aa19.62■□□□□ 0.73
COL9A3-202ENST00000452372 BBC3Q96PG8 261 aaPredicted RBP19.62■□□□□ 0.73
COL9A3-202ENST00000452372 CCDC3Q9BQI4 270 aa19.62■□□□□ 0.73
COL9A3-202ENST00000452372 TREX1Q9NSU2 369 aa19.62■□□□□ 0.73
COL9A3-202ENST00000452372 LRIT1Q9P2V4 623 aa19.62■□□□□ 0.73
COL9A3-202ENST00000452372 CLCA2Q9UQC9 943 aa19.62■□□□□ 0.73
COL9A3-202ENST00000452372 RNF215Q9Y6U7 377 aa19.62■□□□□ 0.73
COL9A3-202ENST00000452372 OR5K4A6NMS3 321 aa19.61■□□□□ 0.73
COL9A3-202ENST00000452372 GOLGA8MH3BSY2 632 aa19.61■□□□□ 0.73
COL9A3-202ENST00000452372 SGTAO43765 313 aa19.61■□□□□ 0.73
COL9A3-202ENST00000452372 SNX2O60749 519 aa19.61■□□□□ 0.73
COL9A3-202ENST00000452372 GOT2P00505 430 aaKnown RBP19.61■□□□□ 0.73
COL9A3-202ENST00000452372 F3P13726 295 aa19.61■□□□□ 0.73
COL9A3-202ENST00000452372 ATP1B2P14415 290 aaPredicted RBP19.61■□□□□ 0.73
COL9A3-202ENST00000452372 VCLP18206 1134 aa19.61■□□□□ 0.73
COL9A3-202ENST00000452372 ITPKBP27987 946 aa19.61■□□□□ 0.73
COL9A3-202ENST00000452372 EIF2S3P41091 472 aaKnown RBP19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms