RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 CXorf40BQ96DE9 158 aa9.53□□□□□ -0.88
USP54-207ENST00000451492 CCDC97Q96F63 343 aaPredicted RBP9.53□□□□□ -0.88
USP54-207ENST00000451492 CTRCQ99895 268 aa9.53□□□□□ -0.88
USP54-207ENST00000451492 TIMM29Q9BSF4 260 aa9.53□□□□□ -0.88
USP54-207ENST00000451492 DPH1Q9BZG8 443 aa9.53□□□□□ -0.88
USP54-207ENST00000451492 ZCCHC2Q9C0B9 1178 aaKnown RBP9.53□□□□□ -0.88
USP54-207ENST00000451492 ASB8Q9H765 288 aa9.53□□□□□ -0.88
USP54-207ENST00000451492 SARS2Q9NP81 518 aaKnown RBP9.53□□□□□ -0.88
USP54-207ENST00000451492 OCIAD1Q9NX40 245 aa9.53□□□□□ -0.88
USP54-207ENST00000451492 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.53□□□□□ -0.88
USP54-207ENST00000451492 CPNE7Q9UBL6 633 aa9.53□□□□□ -0.88
USP54-207ENST00000451492 CRLS1Q9UJA2 301 aa9.53□□□□□ -0.88
USP54-207ENST00000451492 IGSF10Q6WRI0 2623 aa9.53□□□□□ -0.88
USP54-207ENST00000451492 ZFYVE26Q68DK2 2539 aa9.53□□□□□ -0.88
USP54-207ENST00000451492 PIKFYVEQ9Y2I7 2098 aa9.52□□□□□ -0.88
USP54-207ENST00000451492 KIR2DS5A0A0G2JLQ3 304 aa9.52□□□□□ -0.89
USP54-207ENST00000451492 A0A0G2JNG1 304 aa9.52□□□□□ -0.89
USP54-207ENST00000451492 GPR89AB7ZAQ6 455 aa9.52□□□□□ -0.89
USP54-207ENST00000451492 KIR2DS3K7RE56 304 aa9.52□□□□□ -0.89
USP54-207ENST00000451492 METTL18O95568 372 aa9.52□□□□□ -0.89
USP54-207ENST00000451492 IFNB1P01574 187 aa9.52□□□□□ -0.89
USP54-207ENST00000451492 EPOP01588 193 aa9.52□□□□□ -0.89
USP54-207ENST00000451492 GPR89BP0CG08 455 aa9.52□□□□□ -0.89
USP54-207ENST00000451492 PRSS56P0CW18 603 aa9.52□□□□□ -0.89
USP54-207ENST00000451492 LIPCP11150 499 aa9.52□□□□□ -0.89
USP54-207ENST00000451492 FGF3P11487 239 aaPredicted RBP9.52□□□□□ -0.89
USP54-207ENST00000451492 BRAFP15056 766 aa9.52□□□□□ -0.89
USP54-207ENST00000451492 AMD1P17707 334 aa9.52□□□□□ -0.89
USP54-207ENST00000451492 TPH1P17752 444 aa9.52□□□□□ -0.89
USP54-207ENST00000451492 VCLP18206 1134 aa9.52□□□□□ -0.89
USP54-207ENST00000451492 IDSP22304 550 aa9.52□□□□□ -0.89
USP54-207ENST00000451492 ADRA1AP35348 466 aa9.52□□□□□ -0.89
USP54-207ENST00000451492 UCNP55089 124 aa9.52□□□□□ -0.89
USP54-207ENST00000451492 GSDMDP57764 484 aa9.52□□□□□ -0.89
USP54-207ENST00000451492 KLF1Q13351 362 aaPredicted RBP9.52□□□□□ -0.89
USP54-207ENST00000451492 SNX1Q13596 522 aa9.52□□□□□ -0.89
USP54-207ENST00000451492 NFE2L1Q14494 772 aa9.52□□□□□ -0.89
USP54-207ENST00000451492 POU6F1Q14863 301 aa9.52□□□□□ -0.89
USP54-207ENST00000451492 KIR2DS5Q14953 304 aa9.52□□□□□ -0.89
USP54-207ENST00000451492 TAF1AQ15573 450 aaPredicted RBP9.52□□□□□ -0.89
USP54-207ENST00000451492 KCTD19Q17RG1 926 aaPredicted RBP9.52□□□□□ -0.89
USP54-207ENST00000451492 LDLRAP1Q5SW96 308 aa9.52□□□□□ -0.89
USP54-207ENST00000451492 ZDHHC20Q5W0Z9 365 aa9.52□□□□□ -0.89
USP54-207ENST00000451492 DUS1LQ6P1R4 473 aaKnown RBP9.52□□□□□ -0.89
USP54-207ENST00000451492 TMEM71Q6P5X7 295 aa9.52□□□□□ -0.89
USP54-207ENST00000451492 TMEM220Q6QAJ8 160 aa9.52□□□□□ -0.89
USP54-207ENST00000451492 FAM83HQ6ZRV2 1179 aaPredicted RBP9.52□□□□□ -0.89
USP54-207ENST00000451492 C11orf96Q7Z7L8 435 aa9.52□□□□□ -0.89
USP54-207ENST00000451492 TTC13Q8NBP0 860 aa9.52□□□□□ -0.89
USP54-207ENST00000451492 DDHD1Q8NEL9 900 aa9.52□□□□□ -0.89
USP54-207ENST00000451492 GPR150Q8NGU9 434 aa9.52□□□□□ -0.89
USP54-207ENST00000451492 LRRC45Q96CN5 670 aa9.52□□□□□ -0.89
USP54-207ENST00000451492 HES6Q96HZ4 224 aa9.52□□□□□ -0.89
USP54-207ENST00000451492 DNAJC1Q96KC8 554 aaKnown RBP9.52□□□□□ -0.89
USP54-207ENST00000451492 TGM7Q96PF1 710 aa9.52□□□□□ -0.89
USP54-207ENST00000451492 UBL7Q96S82 380 aaPredicted RBP9.52□□□□□ -0.89
USP54-207ENST00000451492 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.52□□□□□ -0.89
USP54-207ENST00000451492 TSGA10Q9BZW7 698 aa9.52□□□□□ -0.89
USP54-207ENST00000451492 ZNF624Q9P2J8 865 aaPredicted RBP9.52□□□□□ -0.89
USP54-207ENST00000451492 WDR37Q9Y2I8 494 aa9.52□□□□□ -0.89
USP54-207ENST00000451492 CFAP20Q9Y6A4 193 aaKnown RBP9.52□□□□□ -0.89
USP54-207ENST00000451492 OR5K4A6NMS3 321 aa9.51□□□□□ -0.89
USP54-207ENST00000451492 HGSO14964 777 aaPredicted RBP9.51□□□□□ -0.89
USP54-207ENST00000451492 POP7O75817 140 aaKnown RBP9.51□□□□□ -0.89
USP54-207ENST00000451492 SRP72O76094 671 aaKnown RBP9.51□□□□□ -0.89
USP54-207ENST00000451492 CRTAMO95727 393 aa9.51□□□□□ -0.89
USP54-207ENST00000451492 MC4RP32245 332 aa9.51□□□□□ -0.89
USP54-207ENST00000451492 SLC19A1P41440 591 aa9.51□□□□□ -0.89
USP54-207ENST00000451492 HALP42357 657 aa9.51□□□□□ -0.89
USP54-207ENST00000451492 MLLT3P42568 568 aaPredicted RBP9.51□□□□□ -0.89
USP54-207ENST00000451492 LMAN1P49257 510 aa9.51□□□□□ -0.89
USP54-207ENST00000451492 SEPHS1P49903 392 aa9.51□□□□□ -0.89
USP54-207ENST00000451492 CLCNKAP51800 687 aa9.51□□□□□ -0.89
USP54-207ENST00000451492 UBE2IP63279 158 aaKnown RBP9.51□□□□□ -0.89
USP54-207ENST00000451492 VAC14Q08AM6 782 aa9.51□□□□□ -0.89
USP54-207ENST00000451492 GPR18Q14330 331 aa9.51□□□□□ -0.89
USP54-207ENST00000451492 CLCA4Q14CN2 919 aa9.51□□□□□ -0.89
USP54-207ENST00000451492 TAF1BQ53T94 588 aaPredicted RBP9.51□□□□□ -0.89
USP54-207ENST00000451492 ZRANB3Q5FWF4 1079 aa9.51□□□□□ -0.89
USP54-207ENST00000451492 MANEAQ5SRI9 462 aa9.51□□□□□ -0.89
USP54-207ENST00000451492 TMEM164Q5U3C3 297 aa9.51□□□□□ -0.89
USP54-207ENST00000451492 ANKS6Q68DC2 871 aa9.51□□□□□ -0.89
USP54-207ENST00000451492 RANBP10Q6VN20 620 aa9.51□□□□□ -0.89
USP54-207ENST00000451492 PRUNE1Q86TP1 453 aa9.51□□□□□ -0.89
USP54-207ENST00000451492 AMZ2Q86W34 360 aa9.51□□□□□ -0.89
USP54-207ENST00000451492 AGBL5Q8NDL9 886 aa9.51□□□□□ -0.89
USP54-207ENST00000451492 CCDC112Q8NEF3 446 aa9.51□□□□□ -0.89
USP54-207ENST00000451492 ZNF398Q8TD17 642 aa9.51□□□□□ -0.89
USP54-207ENST00000451492 BRSK1Q8TDC3 778 aa9.51□□□□□ -0.89
USP54-207ENST00000451492 C1orf54Q8WWF1 131 aa9.51□□□□□ -0.89
USP54-207ENST00000451492 RSC1A1Q92681 617 aa9.51□□□□□ -0.89
USP54-207ENST00000451492 TMEM159Q96B96 161 aa9.51□□□□□ -0.89
USP54-207ENST00000451492 SH3KBP1Q96B97 665 aa9.51□□□□□ -0.89
USP54-207ENST00000451492 SGF29Q96ES7 293 aa9.51□□□□□ -0.89
USP54-207ENST00000451492 CCNL2Q96S94 520 aaPredicted RBP9.51□□□□□ -0.89
USP54-207ENST00000451492 IMP3Q9NV31 184 aaKnown RBP9.51□□□□□ -0.89
USP54-207ENST00000451492 SLC39A1Q9NY26 324 aa9.51□□□□□ -0.89
USP54-207ENST00000451492 PCDHGA7Q9Y5G6 932 aa9.51□□□□□ -0.89
USP54-207ENST00000451492 B3GALT1Q9Y5Z6 326 aa9.51□□□□□ -0.89
USP54-207ENST00000451492 PTPRQQ9UMZ3 2332 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms