RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 DESI2Q9BSY9 194 aa19.09■□□□□ 0.65
USP40-207ENST00000450940 OSGEPL1Q9H4B0 414 aa19.09■□□□□ 0.65
USP40-207ENST00000450940 UGT1A7Q9HAW7 530 aa19.09■□□□□ 0.65
USP40-207ENST00000450940 UGT1A10Q9HAW8 530 aa19.09■□□□□ 0.65
USP40-207ENST00000450940 UGT1A8Q9HAW9 530 aa19.09■□□□□ 0.65
USP40-207ENST00000450940 DNMT3AQ9Y6K1 912 aaPredicted RBP19.09■□□□□ 0.65
USP40-207ENST00000450940 FASNP49327 2511 aaKnown RBP19.08■□□□□ 0.65
USP40-207ENST00000450940 B4E171 279 aa19.08■□□□□ 0.64
USP40-207ENST00000450940 ERVH48-1M5A8F1 160 aa19.08■□□□□ 0.64
USP40-207ENST00000450940 AGRPO00253 132 aa19.08■□□□□ 0.64
USP40-207ENST00000450940 STX7O15400 261 aaKnown RBP19.08■□□□□ 0.64
USP40-207ENST00000450940 BUD23O43709 281 aaKnown RBP19.08■□□□□ 0.64
USP40-207ENST00000450940 BRAFP15056 766 aa19.08■□□□□ 0.64
USP40-207ENST00000450940 LPOP22079 712 aaPredicted RBP19.08■□□□□ 0.64
USP40-207ENST00000450940 MPSTP25325 297 aa19.08■□□□□ 0.64
USP40-207ENST00000450940 CSTF2P33240 577 aaKnown RBP eCLIP19.08■□□□□ 0.64
USP40-207ENST00000450940 TSPAN7P41732 249 aa19.08■□□□□ 0.64
USP40-207ENST00000450940 ARSDP51689 593 aa19.08■□□□□ 0.64
USP40-207ENST00000450940 DMPKQ09013 629 aa19.08■□□□□ 0.64
USP40-207ENST00000450940 GTF2H3Q13889 308 aa19.08■□□□□ 0.64
USP40-207ENST00000450940 DENND5AQ6IQ26 1287 aa19.08■□□□□ 0.64
USP40-207ENST00000450940 FAM151BQ6UXP7 276 aa19.08■□□□□ 0.64
USP40-207ENST00000450940 CCDC81Q6ZN84 652 aa19.08■□□□□ 0.64
USP40-207ENST00000450940 BMPERQ8N8U9 685 aa19.08■□□□□ 0.64
USP40-207ENST00000450940 RASGEF1AQ8N9B8 481 aa19.08■□□□□ 0.64
USP40-207ENST00000450940 GDAP1Q8TB36 358 aa19.08■□□□□ 0.64
USP40-207ENST00000450940 CCDC110Q8TBZ0 833 aa19.08■□□□□ 0.64
USP40-207ENST00000450940 UBE2Q2Q8WVN8 375 aa19.08■□□□□ 0.64
USP40-207ENST00000450940 SLC39A7Q92504 469 aa19.08■□□□□ 0.64
USP40-207ENST00000450940 ZCCHC2Q9C0B9 1178 aaKnown RBP19.08■□□□□ 0.64
USP40-207ENST00000450940 ARL5AQ9Y689 179 aa19.08■□□□□ 0.64
USP40-207ENST00000450940 GOLGA6L9A6NEM1 432 aa19.07■□□□□ 0.64
USP40-207ENST00000450940 C2orf81A6NN90 581 aa19.07■□□□□ 0.64
USP40-207ENST00000450940 AGAP14A8MT82 685 aa19.07■□□□□ 0.64
USP40-207ENST00000450940 VCLP18206 1134 aa19.07■□□□□ 0.64
USP40-207ENST00000450940 IDSP22304 550 aa19.07■□□□□ 0.64
USP40-207ENST00000450940 PTPRCAPQ14761 206 aa19.07■□□□□ 0.64
USP40-207ENST00000450940 PLA2G4EQ3MJ16 856 aa19.07■□□□□ 0.64
USP40-207ENST00000450940 GPRC6AQ5T6X5 926 aa19.07■□□□□ 0.64
USP40-207ENST00000450940 TMEM26Q6ZUK4 368 aa19.07■□□□□ 0.64
USP40-207ENST00000450940 ZFAND4Q86XD8 727 aa19.07■□□□□ 0.64
USP40-207ENST00000450940 SPC24Q8NBT2 197 aa19.07■□□□□ 0.64
USP40-207ENST00000450940 ZNF398Q8TD17 642 aa19.07■□□□□ 0.64
USP40-207ENST00000450940 TTC25Q96NG3 672 aa19.07■□□□□ 0.64
USP40-207ENST00000450940 DDA1Q9BW61 102 aa19.07■□□□□ 0.64
USP40-207ENST00000450940 TBC1D10AQ9BXI6 508 aa19.07■□□□□ 0.64
USP40-207ENST00000450940 FEZ2Q9UHY8 353 aaPredicted RBP19.07■□□□□ 0.64
USP40-207ENST00000450940 PACSIN2Q9UNF0 486 aaPredicted RBP19.07■□□□□ 0.64
USP40-207ENST00000450940 DNAJC16Q9Y2G8 782 aa19.07■□□□□ 0.64
USP40-207ENST00000450940 MN1Q10571 1320 aaPredicted RBP19.06■□□□□ 0.64
USP40-207ENST00000450940 GPR39O43194 453 aa19.06■□□□□ 0.64
USP40-207ENST00000450940 FTCDO95954 541 aa19.06■□□□□ 0.64
USP40-207ENST00000450940 VIPP01282 170 aa19.06■□□□□ 0.64
USP40-207ENST00000450940 CTSCP53634 463 aa19.06■□□□□ 0.64
USP40-207ENST00000450940 PDE1BQ01064 536 aa19.06■□□□□ 0.64
USP40-207ENST00000450940 OLIG2Q13516 323 aa19.06■□□□□ 0.64
USP40-207ENST00000450940 KCTD11Q693B1 232 aa19.06■□□□□ 0.64
USP40-207ENST00000450940 TRAPPC5Q8IUR0 188 aa19.06■□□□□ 0.64
USP40-207ENST00000450940 CCDC112Q8NEF3 446 aa19.06■□□□□ 0.64
USP40-207ENST00000450940 OR4K2Q8NGD2 314 aa19.06■□□□□ 0.64
USP40-207ENST00000450940 SLC35B2Q8TB61 432 aa19.06■□□□□ 0.64
USP40-207ENST00000450940 NCSTNQ92542 709 aa19.06■□□□□ 0.64
USP40-207ENST00000450940 TTC9Q92623 222 aa19.06■□□□□ 0.64
USP40-207ENST00000450940 APOL2Q9BQE5 337 aa19.06■□□□□ 0.64
USP40-207ENST00000450940 SLC40A1Q9NP59 571 aa19.06■□□□□ 0.64
USP40-207ENST00000450940 POT1Q9NUX5 634 aa19.06■□□□□ 0.64
USP40-207ENST00000450940 OCIAD1Q9NX40 245 aa19.06■□□□□ 0.64
USP40-207ENST00000450940 OGFRQ9NZT2 677 aa19.06■□□□□ 0.64
USP40-207ENST00000450940 CAPN6Q9Y6Q1 641 aa19.06■□□□□ 0.64
USP40-207ENST00000450940 CFAP46Q8IYW2 2715 aa19.06■□□□□ 0.64
USP40-207ENST00000450940 PDZK1P1A8MUH7 402 aa19.05■□□□□ 0.64
USP40-207ENST00000450940 POP7O75817 140 aaKnown RBP19.05■□□□□ 0.64
USP40-207ENST00000450940 CRTAMO95727 393 aa19.05■□□□□ 0.64
USP40-207ENST00000450940 C9P02748 559 aa19.05■□□□□ 0.64
USP40-207ENST00000450940 XIAPP98170 497 aa19.05■□□□□ 0.64
USP40-207ENST00000450940 COL9A2Q14055 689 aaPredicted RBP19.05■□□□□ 0.64
USP40-207ENST00000450940 PARP6Q2NL67 630 aa19.05■□□□□ 0.64
USP40-207ENST00000450940 TMEM220Q6QAJ8 160 aa19.05■□□□□ 0.64
USP40-207ENST00000450940 AMZ2Q86W34 360 aa19.05■□□□□ 0.64
USP40-207ENST00000450940 PLXDC1Q8IUK5 500 aa19.05■□□□□ 0.64
USP40-207ENST00000450940 RBM12BQ8IXT5 1001 aaKnown RBP19.05■□□□□ 0.64
USP40-207ENST00000450940 ART4Q93070 314 aa19.05■□□□□ 0.64
USP40-207ENST00000450940 PMEPA1Q969W9 287 aa19.05■□□□□ 0.64
USP40-207ENST00000450940 ZNF514Q96K75 400 aaPredicted RBP19.05■□□□□ 0.64
USP40-207ENST00000450940 TBL1YQ9BQ87 522 aa19.05■□□□□ 0.64
USP40-207ENST00000450940 ASPSCR1Q9BZE9 553 aa19.05■□□□□ 0.64
USP40-207ENST00000450940 SLC39A1Q9NY26 324 aa19.05■□□□□ 0.64
USP40-207ENST00000450940 R3HDM2Q9Y2K5 976 aaKnown RBP19.05■□□□□ 0.64
USP40-207ENST00000450940 KCTD3Q9Y597 815 aa19.05■□□□□ 0.64
USP40-207ENST00000450940 SLC30A1Q9Y6M5 507 aa19.05■□□□□ 0.64
USP40-207ENST00000450940 EIF4E1BA6NMX2 242 aaKnown RBP19.04■□□□□ 0.64
USP40-207ENST00000450940 SRP72O76094 671 aaKnown RBP19.04■□□□□ 0.64
USP40-207ENST00000450940 PRAMEF1O95521 474 aa19.04■□□□□ 0.64
USP40-207ENST00000450940 ANKRD34CP0C6C1 535 aa19.04■□□□□ 0.64
USP40-207ENST00000450940 RPL10P27635 214 aaKnown RBP19.04■□□□□ 0.64
USP40-207ENST00000450940 ZNF140P52738 457 aaPredicted RBP19.04■□□□□ 0.64
USP40-207ENST00000450940 RAB15P59190 212 aa19.04■□□□□ 0.64
USP40-207ENST00000450940 MC2RQ01718 297 aa19.04■□□□□ 0.64
USP40-207ENST00000450940 CLCA4Q14CN2 919 aa19.04■□□□□ 0.64
USP40-207ENST00000450940 TRIM48Q8IWZ4 208 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms