RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 RPL22P35268 128 aaKnown RBP14.37□□□□□ -0.11
USP39-206ENST00000448971 UGT1A3P35503 534 aa14.37□□□□□ -0.11
USP39-206ENST00000448971 UGT1A5P35504 534 aa14.37□□□□□ -0.11
USP39-206ENST00000448971 VPS41P49754 854 aa14.37□□□□□ -0.11
USP39-206ENST00000448971 LDLRAP1Q5SW96 308 aa14.37□□□□□ -0.11
USP39-206ENST00000448971 C4orf22Q6V702 233 aa14.37□□□□□ -0.11
USP39-206ENST00000448971 LRRTM4Q86VH4 590 aa14.37□□□□□ -0.11
USP39-206ENST00000448971 DDHD1Q8NEL9 900 aa14.37□□□□□ -0.11
USP39-206ENST00000448971 DTX3LQ8TDB6 740 aa14.37□□□□□ -0.11
USP39-206ENST00000448971 MAGOHBQ96A72 148 aaKnown RBP14.37□□□□□ -0.11
USP39-206ENST00000448971 GRAMD1AQ96CP6 724 aa14.37□□□□□ -0.11
USP39-206ENST00000448971 ASB8Q9H765 288 aa14.37□□□□□ -0.11
USP39-206ENST00000448971 UGT1A7Q9HAW7 530 aa14.37□□□□□ -0.11
USP39-206ENST00000448971 UGT1A10Q9HAW8 530 aa14.37□□□□□ -0.11
USP39-206ENST00000448971 UGT1A8Q9HAW9 530 aa14.37□□□□□ -0.11
USP39-206ENST00000448971 SMOXQ9NWM0 555 aa14.37□□□□□ -0.11
USP39-206ENST00000448971 TTC7AQ9ULT0 858 aaPredicted RBP14.37□□□□□ -0.11
USP39-206ENST00000448971 ENTPD2Q9Y5L3 495 aa14.37□□□□□ -0.11
USP39-206ENST00000448971 ST14Q9Y5Y6 855 aa14.37□□□□□ -0.11
USP39-206ENST00000448971 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.37□□□□□ -0.112e-8■■■□□ 16.1
USP39-206ENST00000448971 SLC30A1Q9Y6M5 507 aa14.37□□□□□ -0.11
USP39-206ENST00000448971 ZNF106Q9H2Y7 1883 aaKnown RBP14.37□□□□□ -0.11
USP39-206ENST00000448971 TLN1Q9Y490 2541 aaKnown RBP14.37□□□□□ -0.11
USP39-206ENST00000448971 CDRT15L2A8MXV6 281 aa14.36□□□□□ -0.11
USP39-206ENST00000448971 K7ENP7 123 aa14.36□□□□□ -0.11
USP39-206ENST00000448971 GAPDHSO14556 408 aaPredicted RBP14.36□□□□□ -0.11
USP39-206ENST00000448971 LDB2O43679 373 aa14.36□□□□□ -0.11
USP39-206ENST00000448971 SNX2O60749 519 aa14.36□□□□□ -0.11
USP39-206ENST00000448971 SUN1O94901 812 aa14.36□□□□□ -0.11
USP39-206ENST00000448971 ECEL1O95672 775 aa14.36□□□□□ -0.11
USP39-206ENST00000448971 MSH3P20585 1137 aa14.36□□□□□ -0.11
USP39-206ENST00000448971 MC4RP32245 332 aa14.36□□□□□ -0.11
USP39-206ENST00000448971 TERF1P54274 439 aa14.36□□□□□ -0.11
USP39-206ENST00000448971 MSLNQ13421 630 aaPredicted RBP14.36□□□□□ -0.11
USP39-206ENST00000448971 SPIDRQ14159 915 aa14.36□□□□□ -0.11
USP39-206ENST00000448971 HLTFQ14527 1009 aaKnown RBP eCLIP14.36□□□□□ -0.11
USP39-206ENST00000448971 TRIP13Q15645 432 aaPredicted RBP14.36□□□□□ -0.11
USP39-206ENST00000448971 KHDC1Q4VXA5 237 aaKnown RBP14.36□□□□□ -0.11
USP39-206ENST00000448971 CERCAMQ5T4B2 595 aa14.36□□□□□ -0.11
USP39-206ENST00000448971 GPRC6AQ5T6X5 926 aa14.36□□□□□ -0.11
USP39-206ENST00000448971 INO80CQ6PI98 192 aaPredicted RBP14.36□□□□□ -0.11
USP39-206ENST00000448971 ZNF398Q8TD17 642 aa14.36□□□□□ -0.11
USP39-206ENST00000448971 ACTRT1Q8TDG2 376 aa14.36□□□□□ -0.11
USP39-206ENST00000448971 PATE1Q8WXA2 126 aa14.36□□□□□ -0.11
USP39-206ENST00000448971 ATXN7L3BQ96GX2 97 aa14.36□□□□□ -0.11
USP39-206ENST00000448971 ZMYND15Q9H091 742 aa14.36□□□□□ -0.11
USP39-206ENST00000448971 STN1Q9H668 368 aaKnown RBP14.36□□□□□ -0.11
USP39-206ENST00000448971 EIF2B3Q9NR50 452 aaKnown RBP14.36□□□□□ -0.11
USP39-206ENST00000448971 KLC4Q9NSK0 619 aa14.36□□□□□ -0.11
USP39-206ENST00000448971 TMPRSS11EQ9UL52 423 aa14.36□□□□□ -0.11
USP39-206ENST00000448971 DNAJC16Q9Y2G8 782 aa14.36□□□□□ -0.11
USP39-206ENST00000448971 PCDHGA8Q9Y5G5 932 aa14.36□□□□□ -0.11
USP39-206ENST00000448971 RNF215Q9Y6U7 377 aa14.36□□□□□ -0.11
USP39-206ENST00000448971 HEATR9A2RTY3 570 aa14.35□□□□□ -0.11
USP39-206ENST00000448971 PMS2P1A4D2B8 440 aa14.35□□□□□ -0.11
USP39-206ENST00000448971 RHPN2P1A8MT19 583 aa14.35□□□□□ -0.11
USP39-206ENST00000448971 PDZK1P1A8MUH7 402 aa14.35□□□□□ -0.11
USP39-206ENST00000448971 CES2O00748 559 aa14.35□□□□□ -0.11
USP39-206ENST00000448971 CHUKO15111 745 aa14.35□□□□□ -0.11
USP39-206ENST00000448971 KMOO15229 486 aa14.35□□□□□ -0.11
USP39-206ENST00000448971 ZNF185O15231 689 aa14.35□□□□□ -0.11
USP39-206ENST00000448971 CASC3O15234 703 aaKnown RBP14.35□□□□□ -0.11
USP39-206ENST00000448971 PHF2O75151 1096 aa14.35□□□□□ -0.11
USP39-206ENST00000448971 RPLP0P05388 317 aaKnown RBP14.35□□□□□ -0.11
USP39-206ENST00000448971 SLC2A4P14672 509 aa14.35□□□□□ -0.11
USP39-206ENST00000448971 GLB1P16278 677 aa14.35□□□□□ -0.11
USP39-206ENST00000448971 VCLP18206 1134 aa14.35□□□□□ -0.11
USP39-206ENST00000448971 PPM1FP49593 454 aaPredicted RBP14.35□□□□□ -0.11
USP39-206ENST00000448971 TMEM115Q12893 351 aaPredicted RBP14.35□□□□□ -0.11
USP39-206ENST00000448971 NFATC2Q13469 925 aa14.35□□□□□ -0.11
USP39-206ENST00000448971 KCTD19Q17RG1 926 aaPredicted RBP14.35□□□□□ -0.11
USP39-206ENST00000448971 CCDC38Q502W7 563 aa14.35□□□□□ -0.11
USP39-206ENST00000448971 ZRANB3Q5FWF4 1079 aa14.35□□□□□ -0.11
USP39-206ENST00000448971 C3orf38Q5JPI3 329 aa14.35□□□□□ -0.11
USP39-206ENST00000448971 TTC27Q6P3X3 843 aa14.35□□□□□ -0.11
USP39-206ENST00000448971 CCDC137Q6PK04 289 aaKnown RBP14.35□□□□□ -0.11
USP39-206ENST00000448971 OGFOD3Q6PK18 319 aa14.35□□□□□ -0.11
USP39-206ENST00000448971 RBM44Q6ZP01 1051 aaKnown RBP14.35□□□□□ -0.11
USP39-206ENST00000448971 CCNJLQ8IV13 435 aa14.35□□□□□ -0.11
USP39-206ENST00000448971 NAGSQ8N159 534 aa14.35□□□□□ -0.11
USP39-206ENST00000448971 Q8N9G6 341 aaPredicted RBP14.35□□□□□ -0.11
USP39-206ENST00000448971 PPHLN1Q8NEY8 458 aaKnown RBP14.35□□□□□ -0.11
USP39-206ENST00000448971 WDR48Q8TAF3 677 aa14.35□□□□□ -0.11
USP39-206ENST00000448971 ULK4Q96C45 1275 aa14.35□□□□□ -0.11
USP39-206ENST00000448971 CAPZA3Q96KX2 299 aa14.35□□□□□ -0.11
USP39-206ENST00000448971 NAPGQ99747 312 aaPredicted RBP14.35□□□□□ -0.11
USP39-206ENST00000448971 LRIT1Q9P2V4 623 aa14.35□□□□□ -0.11
USP39-206ENST00000448971 RABGEF1Q9UJ41 708 aa14.35□□□□□ -0.11
USP39-206ENST00000448971 UNC13CQ8NB66 2214 aa14.35□□□□□ -0.11
USP39-206ENST00000448971 PTPN13Q12923 2485 aa14.35□□□□□ -0.11
USP39-206ENST00000448971 OR2AG2A6NM03 316 aa14.34□□□□□ -0.11
USP39-206ENST00000448971 CFAP99D6REC4 459 aa14.34□□□□□ -0.11
USP39-206ENST00000448971 NUDT21O43809 227 aaKnown RBP14.34□□□□□ -0.11
USP39-206ENST00000448971 KRT14P02533 472 aa14.34□□□□□ -0.11
USP39-206ENST00000448971 RALBP11234 206 aa14.34□□□□□ -0.11
USP39-206ENST00000448971 ZNF7P17097 686 aaPredicted RBP14.34□□□□□ -0.11
USP39-206ENST00000448971 RBMS1P29558 406 aaKnown RBP14.34□□□□□ -0.11
USP39-206ENST00000448971 PBLDP30039 288 aaPredicted RBP14.34□□□□□ -0.11
USP39-206ENST00000448971 CA5AP35218 305 aa14.34□□□□□ -0.11
USP39-206ENST00000448971 COILP38432 576 aaPredicted RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms