RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 TMEFF1Q8IYR6 380 aa19.27■□□□□ 0.67
SGCE-207ENST00000447873 KRT222Q8N1A0 295 aa19.27■□□□□ 0.67
SGCE-207ENST00000447873 HSPA12BQ96MM6 686 aa19.27■□□□□ 0.67
SGCE-207ENST00000447873 GPR21Q99679 349 aa19.27■□□□□ 0.67
SGCE-207ENST00000447873 TSSK1BQ9BXA7 367 aa19.27■□□□□ 0.67
SGCE-207ENST00000447873 GPAMQ9HCL2 828 aa19.27■□□□□ 0.67
SGCE-207ENST00000447873 SARS2Q9NP81 518 aaKnown RBP19.27■□□□□ 0.67
SGCE-207ENST00000447873 TOR1BO14657 336 aa19.26■□□□□ 0.67
SGCE-207ENST00000447873 HOXC4P09017 264 aaPredicted RBP19.26■□□□□ 0.67
SGCE-207ENST00000447873 BRAFP15056 766 aa19.26■□□□□ 0.67
SGCE-207ENST00000447873 CREB1P16220 341 aa19.26■□□□□ 0.67
SGCE-207ENST00000447873 ZNF8P17098 575 aaPredicted RBP19.26■□□□□ 0.67
SGCE-207ENST00000447873 ITGB6P18564 788 aa19.26■□□□□ 0.67
SGCE-207ENST00000447873 CD9P21926 228 aa19.26■□□□□ 0.67
SGCE-207ENST00000447873 SKIV2L2P42285 1042 aaKnown RBP19.26■□□□□ 0.67
SGCE-207ENST00000447873 CTSCP53634 463 aa19.26■□□□□ 0.67
SGCE-207ENST00000447873 PFN3P60673 137 aa19.26■□□□□ 0.67
SGCE-207ENST00000447873 TMEM220Q6QAJ8 160 aa19.26■□□□□ 0.67
SGCE-207ENST00000447873 PIAS4Q8N2W9 510 aaPredicted RBP19.26■□□□□ 0.67
SGCE-207ENST00000447873 ALKBH8Q96BT7 664 aaKnown RBP19.26■□□□□ 0.67
SGCE-207ENST00000447873 ZNF514Q96K75 400 aaPredicted RBP19.26■□□□□ 0.67
SGCE-207ENST00000447873 ORAI3Q9BRQ5 295 aa19.26■□□□□ 0.67
SGCE-207ENST00000447873 FAM126AQ9BYI3 521 aaPredicted RBP19.26■□□□□ 0.67
SGCE-207ENST00000447873 SLC13A1Q9BZW2 595 aa19.26■□□□□ 0.67
SGCE-207ENST00000447873 POPDC3Q9HBV1 291 aa19.26■□□□□ 0.67
SGCE-207ENST00000447873 EIF2B4Q9UI10 523 aaKnown RBP19.26■□□□□ 0.67
SGCE-207ENST00000447873 TRMT6Q9UJA5 497 aaKnown RBP19.26■□□□□ 0.67
SGCE-207ENST00000447873 ACOT9Q9Y305 439 aa19.26■□□□□ 0.67
SGCE-207ENST00000447873 THADAQ6YHU6 1953 aa19.26■□□□□ 0.67
SGCE-207ENST00000447873 A6NNZ2 444 aa19.25■□□□□ 0.67
SGCE-207ENST00000447873 SGTAO43765 313 aa19.25■□□□□ 0.67
SGCE-207ENST00000447873 FTH1P02794 183 aa19.25■□□□□ 0.67
SGCE-207ENST00000447873 SLC35E2BP0CK96 405 aa19.25■□□□□ 0.67
SGCE-207ENST00000447873 HTR1BP28222 390 aa19.25■□□□□ 0.67
SGCE-207ENST00000447873 HPDP32754 393 aaPredicted RBP19.25■□□□□ 0.67
SGCE-207ENST00000447873 CSRP3P50461 194 aa19.25■□□□□ 0.67
SGCE-207ENST00000447873 KIAA1024LP59773 190 aa19.25■□□□□ 0.67
SGCE-207ENST00000447873 YPEL5P62699 121 aa19.25■□□□□ 0.67
SGCE-207ENST00000447873 TIAL1Q01085 375 aaKnown RBP eCLIP19.25■□□□□ 0.67
SGCE-207ENST00000447873 SLC18A2Q05940 514 aa19.25■□□□□ 0.67
SGCE-207ENST00000447873 KYAT3Q6YP21 454 aaKnown RBP19.25■□□□□ 0.67
SGCE-207ENST00000447873 SH2D5Q6ZV89 423 aa19.25■□□□□ 0.67
SGCE-207ENST00000447873 LPCAT2Q7L5N7 544 aa19.25■□□□□ 0.67
SGCE-207ENST00000447873 C11orf74Q86VG3 221 aa19.25■□□□□ 0.67
SGCE-207ENST00000447873 TRAPPC5Q8IUR0 188 aa19.25■□□□□ 0.67
SGCE-207ENST00000447873 BEND7Q8N7W2 519 aaPredicted RBP19.25■□□□□ 0.67
SGCE-207ENST00000447873 GAB3Q8WWW8 586 aa19.25■□□□□ 0.67
SGCE-207ENST00000447873 DUSP15Q9H1R2 295 aaPredicted RBP19.25■□□□□ 0.67
SGCE-207ENST00000447873 GPR34Q9UPC5 381 aa19.25■□□□□ 0.67
SGCE-207ENST00000447873 A0A087X1B8 175 aa19.24■□□□□ 0.67
SGCE-207ENST00000447873 FAM86C2PA6NEL3 165 aa19.24■□□□□ 0.67
SGCE-207ENST00000447873 GPR89AB7ZAQ6 455 aa19.24■□□□□ 0.67
SGCE-207ENST00000447873 MAGEC1O60732 1142 aa19.24■□□□□ 0.67
SGCE-207ENST00000447873 GPR89BP0CG08 455 aa19.24■□□□□ 0.67
SGCE-207ENST00000447873 KELP23276 732 aa19.24■□□□□ 0.67
SGCE-207ENST00000447873 CCNFP41002 786 aa19.24■□□□□ 0.67
SGCE-207ENST00000447873 RABIFP47224 123 aa19.24■□□□□ 0.67
SGCE-207ENST00000447873 PRLHRP49683 370 aa19.24■□□□□ 0.67
SGCE-207ENST00000447873 CLCN7P51798 805 aa19.24■□□□□ 0.67
SGCE-207ENST00000447873 THOP1P52888 689 aa19.24■□□□□ 0.67
SGCE-207ENST00000447873 NFATC4Q14934 902 aa19.24■□□□□ 0.67
SGCE-207ENST00000447873 Q6ZSR6 202 aa19.24■□□□□ 0.67
SGCE-207ENST00000447873 OTOAQ7RTW8 1153 aa19.24■□□□□ 0.67
SGCE-207ENST00000447873 CCDC91Q7Z6B0 441 aa19.24■□□□□ 0.67
SGCE-207ENST00000447873 ABI3BPQ7Z7G0 1075 aa19.24■□□□□ 0.67
SGCE-207ENST00000447873 SIDT2Q8NBJ9 832 aaKnown RBP19.24■□□□□ 0.67
SGCE-207ENST00000447873 LKAAEAR1Q8TD35 194 aa19.24■□□□□ 0.67
SGCE-207ENST00000447873 MIR1-1HGQ9H1L0 117 aa19.24■□□□□ 0.67
SGCE-207ENST00000447873 SYTL2Q9HCH5 934 aa19.24■□□□□ 0.67
SGCE-207ENST00000447873 AASDHPPTQ9NRN7 309 aa19.24■□□□□ 0.67
SGCE-207ENST00000447873 SPATS2LQ9NUQ6 558 aaKnown RBP19.24■□□□□ 0.67
SGCE-207ENST00000447873 GALPQ9UBC7 116 aa19.24■□□□□ 0.67
SGCE-207ENST00000447873 ANKRD6Q9Y2G4 727 aa19.24■□□□□ 0.67
SGCE-207ENST00000447873 GON4LQ3T8J9 2241 aa19.24■□□□□ 0.67
SGCE-207ENST00000447873 TMEM202A6NGA9 273 aa19.23■□□□□ 0.67
SGCE-207ENST00000447873 COPEO14579 308 aa19.23■□□□□ 0.67
SGCE-207ENST00000447873 NUAK1O60285 661 aa19.23■□□□□ 0.67
SGCE-207ENST00000447873 DNAJC6O75061 913 aa19.23■□□□□ 0.67
SGCE-207ENST00000447873 SPAG7O75391 227 aa19.23■□□□□ 0.67
SGCE-207ENST00000447873 MAOBP27338 520 aa19.23■□□□□ 0.67
SGCE-207ENST00000447873 CCT5P48643 541 aa19.23■□□□□ 0.67
SGCE-207ENST00000447873 BCL7AQ4VC05 210 aa19.23■□□□□ 0.67
SGCE-207ENST00000447873 WDR45BQ5MNZ6 344 aa19.23■□□□□ 0.67
SGCE-207ENST00000447873 PAQR3Q6TCH7 311 aa19.23■□□□□ 0.67
SGCE-207ENST00000447873 CRTC3Q6UUV7 619 aa19.23■□□□□ 0.67
SGCE-207ENST00000447873 ARMCX6Q7L4S7 300 aa19.23■□□□□ 0.67
SGCE-207ENST00000447873 TBC1D1Q86TI0 1168 aaPredicted RBP19.23■□□□□ 0.67
SGCE-207ENST00000447873 RGL4Q8IZJ4 473 aa19.23■□□□□ 0.67
SGCE-207ENST00000447873 BANPQ8N9N5 519 aa19.23■□□□□ 0.67
SGCE-207ENST00000447873 FAM174AQ8TBP5 190 aa19.23■□□□□ 0.67
SGCE-207ENST00000447873 CD200R1Q8TD46 325 aa19.23■□□□□ 0.67
SGCE-207ENST00000447873 INPP5DQ92835 1189 aa19.23■□□□□ 0.67
SGCE-207ENST00000447873 APOPT1Q96IL0 206 aa19.23■□□□□ 0.67
SGCE-207ENST00000447873 SLC6A18Q96N87 628 aa19.23■□□□□ 0.67
SGCE-207ENST00000447873 CCM2Q9BSQ5 444 aa19.23■□□□□ 0.67
SGCE-207ENST00000447873 SSU72Q9NP77 194 aaKnown RBP19.23■□□□□ 0.67
SGCE-207ENST00000447873 KCNK9Q9NPC2 374 aa19.23■□□□□ 0.67
SGCE-207ENST00000447873 SLC17A4Q9Y2C5 497 aa19.23■□□□□ 0.67
SGCE-207ENST00000447873 DHRS7Q9Y394 339 aa19.23■□□□□ 0.67
SGCE-207ENST00000447873 CHUKO15111 745 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms