RNA–Protein interactions for RNA: ENST00000445336.2

BRAFP1-201, Transcript of BRAF pseudogene 1, humanhuman

BASIC

Gene BRAFP1, Length 2,703 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP1-201ENST00000445336 GNPTGQ9UJJ9 305 aa6.17□□□□□ -1.42
BRAFP1-201ENST00000445336 ACTL7AQ9Y615 435 aa6.17□□□□□ -1.42
BRAFP1-201ENST00000445336 AP1M2Q9Y6Q5 423 aa6.17□□□□□ -1.42
BRAFP1-201ENST00000445336 KLRC4-KLRK1H3BQV0 150 aa6.16□□□□□ -1.42
BRAFP1-201ENST00000445336 TBCAO75347 108 aaKnown RBP6.16□□□□□ -1.42
BRAFP1-201ENST00000445336 WNT7BP56706 349 aa6.16□□□□□ -1.42
BRAFP1-201ENST00000445336 EEF1A1P68104 462 aaKnown RBP6.16□□□□□ -1.42
BRAFP1-201ENST00000445336 EEF1A2Q05639 463 aaKnown RBP6.16□□□□□ -1.42
BRAFP1-201ENST00000445336 NFKBIBQ15653 356 aa6.16□□□□□ -1.42
BRAFP1-201ENST00000445336 FAM120AOSQ5T036 256 aa6.16□□□□□ -1.42
BRAFP1-201ENST00000445336 EEF1A1P5Q5VTE0 462 aa6.16□□□□□ -1.42
BRAFP1-201ENST00000445336 RUSC1-AS1Q66K80 236 aa6.16□□□□□ -1.42
BRAFP1-201ENST00000445336 PNCKQ6P2M8 343 aa6.16□□□□□ -1.42
BRAFP1-201ENST00000445336 GDPD4Q6W3E5 623 aa6.16□□□□□ -1.42
BRAFP1-201ENST00000445336 MMS22LQ6ZRQ5 1243 aa6.16□□□□□ -1.42
BRAFP1-201ENST00000445336 PLEKHM3Q6ZWE6 761 aa6.16□□□□□ -1.42
BRAFP1-201ENST00000445336 ZNF720Q7Z2F6 126 aa6.16□□□□□ -1.42
BRAFP1-201ENST00000445336 ANKRD52Q8NB46 1076 aa6.16□□□□□ -1.42
BRAFP1-201ENST00000445336 OR5B17Q8NGF7 314 aa6.16□□□□□ -1.42
BRAFP1-201ENST00000445336 FAF2Q96CS3 445 aa6.16□□□□□ -1.42
BRAFP1-201ENST00000445336 NUCKS1Q9H1E3 243 aaKnown RBP6.16□□□□□ -1.42
BRAFP1-201ENST00000445336 NOL6Q9H6R4 1146 aaKnown RBP6.16□□□□□ -1.42
BRAFP1-201ENST00000445336 AKIRIN1Q9H9L7 192 aaPredicted RBP6.16□□□□□ -1.42
BRAFP1-201ENST00000445336 GPATCH2LQ9NWQ4 482 aa6.16□□□□□ -1.42
BRAFP1-201ENST00000445336 CGNQ9P2M7 1197 aaKnown RBP6.16□□□□□ -1.42
BRAFP1-201ENST00000445336 NFS1Q9Y697 457 aa6.16□□□□□ -1.42
BRAFP1-201ENST00000445336 WDR1O75083 606 aa6.16□□□□□ -1.42
BRAFP1-201ENST00000445336 ZNF821O75541 412 aaPredicted RBP6.16□□□□□ -1.42
BRAFP1-201ENST00000445336 SERPINA7P05543 415 aa6.16□□□□□ -1.42
BRAFP1-201ENST00000445336 SETSIPP0DME0 302 aa6.16□□□□□ -1.42
BRAFP1-201ENST00000445336 PCMT1P22061 227 aa6.16□□□□□ -1.42
BRAFP1-201ENST00000445336 ADORA2BP29275 332 aa6.16□□□□□ -1.42
BRAFP1-201ENST00000445336 ENPEPQ07075 957 aa6.16□□□□□ -1.42
BRAFP1-201ENST00000445336 ZNF699Q32M78 642 aa6.16□□□□□ -1.42
BRAFP1-201ENST00000445336 BEAN1Q3B7T3 259 aa6.16□□□□□ -1.42
BRAFP1-201ENST00000445336 TMEM119Q4V9L6 283 aa6.16□□□□□ -1.42
BRAFP1-201ENST00000445336 ZNF766Q5HY98 468 aa6.16□□□□□ -1.42
BRAFP1-201ENST00000445336 BRAT1Q6PJG6 821 aa6.16□□□□□ -1.42
BRAFP1-201ENST00000445336 MAATS1Q7Z4T9 603 aa6.16□□□□□ -1.42
BRAFP1-201ENST00000445336 SFTPA2Q8IWL1 248 aa6.16□□□□□ -1.42
BRAFP1-201ENST00000445336 PIAS4Q8N2W9 510 aaPredicted RBP6.16□□□□□ -1.42
BRAFP1-201ENST00000445336 MDS2Q8NDY4 140 aa6.16□□□□□ -1.42
BRAFP1-201ENST00000445336 PROX1Q92786 737 aa6.16□□□□□ -1.42
BRAFP1-201ENST00000445336 TNFRSF13CQ96RJ3 184 aa6.16□□□□□ -1.42
BRAFP1-201ENST00000445336 AP1M1Q9BXS5 423 aa6.16□□□□□ -1.42
BRAFP1-201ENST00000445336 CHRNA10Q9GZZ6 450 aa6.16□□□□□ -1.42
BRAFP1-201ENST00000445336 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.16□□□□□ -1.42
BRAFP1-201ENST00000445336 ENAMQ9NRM1 1142 aa6.16□□□□□ -1.42
BRAFP1-201ENST00000445336 ARL15Q9NXU5 204 aa6.16□□□□□ -1.42
BRAFP1-201ENST00000445336 PCDHA7Q9UN72 937 aa6.16□□□□□ -1.42
BRAFP1-201ENST00000445336 OR1A2Q9Y585 309 aa6.16□□□□□ -1.42
BRAFP1-201ENST00000445336 A0A1W2PQ67 120 aa6.15□□□□□ -1.42
BRAFP1-201ENST00000445336 ILVBLA1L0T0 632 aa6.15□□□□□ -1.42
BRAFP1-201ENST00000445336 O00370 1275 aa6.15□□□□□ -1.42
BRAFP1-201ENST00000445336 MATN3O15232 486 aa6.15□□□□□ -1.42
BRAFP1-201ENST00000445336 PCCBP05166 539 aa6.15□□□□□ -1.42
BRAFP1-201ENST00000445336 PPM1FP49593 454 aaPredicted RBP6.15□□□□□ -1.42
BRAFP1-201ENST00000445336 OCRLQ01968 901 aa6.15□□□□□ -1.42
BRAFP1-201ENST00000445336 ATXN7L2Q5T6C5 722 aaPredicted RBP6.15□□□□□ -1.42
BRAFP1-201ENST00000445336 CD163Q86VB7 1156 aa6.15□□□□□ -1.42
BRAFP1-201ENST00000445336 SCUBE1Q8IWY4 988 aa6.15□□□□□ -1.42
BRAFP1-201ENST00000445336 GUF1Q8N442 669 aaKnown RBP6.15□□□□□ -1.42
BRAFP1-201ENST00000445336 CCDC110Q8TBZ0 833 aa6.15□□□□□ -1.42
BRAFP1-201ENST00000445336 CREB3L4Q8TEY5 395 aa6.15□□□□□ -1.42
BRAFP1-201ENST00000445336 SPOCK2Q92563 424 aa6.15□□□□□ -1.42
BRAFP1-201ENST00000445336 GRIP2Q9C0E4 1043 aa6.15□□□□□ -1.42
BRAFP1-201ENST00000445336 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.15□□□□□ -1.42
BRAFP1-201ENST00000445336 SMYD3Q9H7B4 428 aa6.15□□□□□ -1.42
BRAFP1-201ENST00000445336 LRRC4Q9HBW1 653 aa6.15□□□□□ -1.42
BRAFP1-201ENST00000445336 PLCB1Q9NQ66 1216 aa6.15□□□□□ -1.42
BRAFP1-201ENST00000445336 SFMBT1Q9UHJ3 866 aa6.15□□□□□ -1.42
BRAFP1-201ENST00000445336 PSMD11O00231 422 aa6.15□□□□□ -1.43
BRAFP1-201ENST00000445336 KLHL18O94889 574 aa6.15□□□□□ -1.43
BRAFP1-201ENST00000445336 IL18BPO95998 194 aa6.15□□□□□ -1.43
BRAFP1-201ENST00000445336 HKR1P10072 659 aa6.15□□□□□ -1.43
BRAFP1-201ENST00000445336 F3P13726 295 aa6.15□□□□□ -1.43
BRAFP1-201ENST00000445336 MMP12P39900 470 aa6.15□□□□□ -1.43
BRAFP1-201ENST00000445336 CARSP49589 748 aaKnown RBP6.15□□□□□ -1.43
BRAFP1-201ENST00000445336 ARL4DP49703 201 aa6.15□□□□□ -1.43
BRAFP1-201ENST00000445336 DAOAP59103 153 aa6.15□□□□□ -1.43
BRAFP1-201ENST00000445336 POLD3Q15054 466 aaPredicted RBP6.15□□□□□ -1.43
BRAFP1-201ENST00000445336 AFMIDQ63HM1 303 aa6.15□□□□□ -1.43
BRAFP1-201ENST00000445336 BTLAQ7Z6A9 289 aa6.15□□□□□ -1.43
BRAFP1-201ENST00000445336 PIGZQ86VD9 579 aa6.15□□□□□ -1.43
BRAFP1-201ENST00000445336 SMC5Q8IY18 1101 aa6.15□□□□□ -1.43
BRAFP1-201ENST00000445336 HORMAD2Q8N7B1 307 aa6.15□□□□□ -1.43
BRAFP1-201ENST00000445336 OR2AP1Q8NGE2 309 aa6.15□□□□□ -1.43
BRAFP1-201ENST00000445336 KCNB2Q92953 911 aa6.15□□□□□ -1.43
BRAFP1-201ENST00000445336 PPP1R14AQ96A00 147 aa6.15□□□□□ -1.43
BRAFP1-201ENST00000445336 TMEM125Q96AQ2 219 aa6.15□□□□□ -1.43
BRAFP1-201ENST00000445336 THOC3Q96J01 351 aaKnown RBP6.15□□□□□ -1.43
BRAFP1-201ENST00000445336 ZNF641Q96N77 438 aaPredicted RBP6.15□□□□□ -1.43
BRAFP1-201ENST00000445336 ULBP1Q9BZM6 244 aa6.15□□□□□ -1.43
BRAFP1-201ENST00000445336 FOXP1Q9H334 677 aaPredicted RBP6.15□□□□□ -1.43
BRAFP1-201ENST00000445336 ACTR5Q9H9F9 607 aaPredicted RBP6.15□□□□□ -1.43
BRAFP1-201ENST00000445336 POLD4Q9HCU8 107 aa6.15□□□□□ -1.43
BRAFP1-201ENST00000445336 VPS18Q9P253 973 aa6.15□□□□□ -1.43
BRAFP1-201ENST00000445336 CPNE7Q9UBL6 633 aa6.15□□□□□ -1.43
BRAFP1-201ENST00000445336 SUFUQ9UMX1 484 aa6.15□□□□□ -1.43
BRAFP1-201ENST00000445336 YLPM1P49750 1951 aaKnown RBP6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms