RNA–Protein interactions for RNA: ENST00000444457.5

PMPCB-204, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 2,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-204ENST00000444457 FBRSL1Q9HCM7 1045 aaKnown RBP18.74■□□□□ 0.59
PMPCB-204ENST00000444457 TOR1BO14657 336 aa18.74■□□□□ 0.59
PMPCB-204ENST00000444457 SLC2A3P11169 496 aa18.74■□□□□ 0.59
PMPCB-204ENST00000444457 MTHFD1P11586 935 aaKnown RBP18.74■□□□□ 0.59
PMPCB-204ENST00000444457 CD86P42081 329 aa18.74■□□□□ 0.59
PMPCB-204ENST00000444457 TBX4P57082 545 aa18.74■□□□□ 0.59
PMPCB-204ENST00000444457 YBX1P67809 324 aaKnown RBP18.74■□□□□ 0.59
PMPCB-204ENST00000444457 CACNB2Q08289 660 aaPredicted RBP18.74■□□□□ 0.59
PMPCB-204ENST00000444457 GALNT1Q10472 559 aaPredicted RBP18.74■□□□□ 0.59
PMPCB-204ENST00000444457 FAM83EQ2M2I3 478 aa18.74■□□□□ 0.59
PMPCB-204ENST00000444457 PTRH1Q86Y79 214 aaKnown RBP18.74■□□□□ 0.59
PMPCB-204ENST00000444457 KLHL5Q96PQ7 755 aa18.74■□□□□ 0.59
PMPCB-204ENST00000444457 BCL7BQ9BQE9 202 aa18.74■□□□□ 0.59
PMPCB-204ENST00000444457 ADNPQ9H2P0 1102 aa18.74■□□□□ 0.59
PMPCB-204ENST00000444457 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.74■□□□□ 0.599e-17■■■□□ 15.3
PMPCB-204ENST00000444457 BAG5Q9UL15 447 aa18.74■□□□□ 0.59
PMPCB-204ENST00000444457 PCDHGA11Q9Y5H2 935 aa18.74■□□□□ 0.59
PMPCB-204ENST00000444457 XYLBO75191 536 aa18.73■□□□□ 0.59
PMPCB-204ENST00000444457 HAPLN1P10915 354 aaPredicted RBP18.73■□□□□ 0.59
PMPCB-204ENST00000444457 RHOQP17081 205 aa18.73■□□□□ 0.59
PMPCB-204ENST00000444457 CAPN3P20807 821 aa18.73■□□□□ 0.59
PMPCB-204ENST00000444457 BMPR1AP36894 532 aa18.73■□□□□ 0.59
PMPCB-204ENST00000444457 CLCN5P51795 746 aa18.73■□□□□ 0.59
PMPCB-204ENST00000444457 ITKQ08881 620 aa18.73■□□□□ 0.59
PMPCB-204ENST00000444457 SLC10A7Q0GE19 358 aa18.73■□□□□ 0.59
PMPCB-204ENST00000444457 CAPRIN1Q14444 709 aaKnown RBP18.73■□□□□ 0.59
PMPCB-204ENST00000444457 DDR2Q16832 855 aa18.73■□□□□ 0.59
PMPCB-204ENST00000444457 MS4A13Q5J8X5 152 aa18.73■□□□□ 0.59
PMPCB-204ENST00000444457 ZNF280BQ86YH2 543 aa18.73■□□□□ 0.59
PMPCB-204ENST00000444457 ARMC8Q8IUR7 673 aa18.73■□□□□ 0.59
PMPCB-204ENST00000444457 OR13J1Q8NGT2 312 aa18.73■□□□□ 0.59
PMPCB-204ENST00000444457 FATE1Q969F0 183 aa18.73■□□□□ 0.59
PMPCB-204ENST00000444457 ZNF486Q96H40 463 aaPredicted RBP18.73■□□□□ 0.59
PMPCB-204ENST00000444457 ZYG11BQ9C0D3 744 aa18.73■□□□□ 0.59
PMPCB-204ENST00000444457 SP140LQ9H930 580 aa18.73■□□□□ 0.59
PMPCB-204ENST00000444457 TMEM248Q9NWD8 314 aa18.73■□□□□ 0.59
PMPCB-204ENST00000444457 GABRQQ9UN88 632 aa18.73■□□□□ 0.59
PMPCB-204ENST00000444457 PCDHA9Q9Y5H5 950 aa18.73■□□□□ 0.59
PMPCB-204ENST00000444457 CNTN5O94779 1100 aa18.73■□□□□ 0.59
PMPCB-204ENST00000444457 SERPINB1P30740 379 aa18.73■□□□□ 0.59
PMPCB-204ENST00000444457 DSC2Q02487 901 aa18.73■□□□□ 0.59
PMPCB-204ENST00000444457 FOXM1Q08050 763 aa18.73■□□□□ 0.59
PMPCB-204ENST00000444457 ILF2Q12905 390 aaKnown RBP18.73■□□□□ 0.59
PMPCB-204ENST00000444457 DPY19L1Q2PZI1 675 aa18.73■□□□□ 0.59
PMPCB-204ENST00000444457 ALFQ53S48 1182 aa18.73■□□□□ 0.59
PMPCB-204ENST00000444457 MARC1Q5VT66 337 aa18.73■□□□□ 0.59
PMPCB-204ENST00000444457 SPNS2Q8IVW8 549 aa18.73■□□□□ 0.59
PMPCB-204ENST00000444457 DCP1BQ8IZD4 617 aaKnown RBP18.73■□□□□ 0.59
PMPCB-204ENST00000444457 GABPB2Q8TAK5 448 aaPredicted RBP18.73■□□□□ 0.59
PMPCB-204ENST00000444457 CAPSLQ8WWF8 208 aa18.73■□□□□ 0.59
PMPCB-204ENST00000444457 PABPC5Q96DU9 382 aaKnown RBP18.73■□□□□ 0.59
PMPCB-204ENST00000444457 DGCR6LQ9BY27 220 aa18.73■□□□□ 0.59
PMPCB-204ENST00000444457 ANGPT2O15123 496 aa18.72■□□□□ 0.59
PMPCB-204ENST00000444457 GABARAPO95166 117 aa18.72■□□□□ 0.59
PMPCB-204ENST00000444457 CHEK2O96017 543 aa18.72■□□□□ 0.59
PMPCB-204ENST00000444457 MMP2P08253 660 aa18.72■□□□□ 0.59
PMPCB-204ENST00000444457 LTA4HP09960 611 aaKnown RBP18.72■□□□□ 0.59
PMPCB-204ENST00000444457 ITIH1P19827 911 aa18.72■□□□□ 0.59
PMPCB-204ENST00000444457 KCNA5P22460 613 aa18.72■□□□□ 0.59
PMPCB-204ENST00000444457 ALDH3A2P51648 485 aa18.72■□□□□ 0.59
PMPCB-204ENST00000444457 ARSFP54793 590 aa18.72■□□□□ 0.59
PMPCB-204ENST00000444457 ECT2LQ008S8 904 aa18.72■□□□□ 0.59
PMPCB-204ENST00000444457 CLCQ05315 142 aa18.72■□□□□ 0.59
PMPCB-204ENST00000444457 LRIT3Q3SXY7 679 aa18.72■□□□□ 0.59
PMPCB-204ENST00000444457 ZIK1Q3SY52 487 aaPredicted RBP18.72■□□□□ 0.59
PMPCB-204ENST00000444457 UGT3A2Q3SY77 523 aa18.72■□□□□ 0.59
PMPCB-204ENST00000444457 VPS26BQ4G0F5 336 aa18.72■□□□□ 0.59
PMPCB-204ENST00000444457 PYCR3Q53H96 274 aa18.72■□□□□ 0.59
PMPCB-204ENST00000444457 AGAP9Q5VTM2 703 aa18.72■□□□□ 0.59
PMPCB-204ENST00000444457 RNF135Q8IUD6 432 aa18.72■□□□□ 0.59
PMPCB-204ENST00000444457 Q8N9G6 341 aaPredicted RBP18.72■□□□□ 0.59
PMPCB-204ENST00000444457 PDZD8Q8NEN9 1154 aa18.72■□□□□ 0.59
PMPCB-204ENST00000444457 OR6Q1Q8NGQ2 317 aa18.72■□□□□ 0.59
PMPCB-204ENST00000444457 CCDC126Q96EE4 140 aa18.72■□□□□ 0.59
PMPCB-204ENST00000444457 FUBP3Q96I24 572 aaKnown RBP eCLIP18.72■□□□□ 0.59
PMPCB-204ENST00000444457 BDH2Q9BUT1 245 aa18.72■□□□□ 0.59
PMPCB-204ENST00000444457 ARHGAP39Q9C0H5 1083 aa18.72■□□□□ 0.59
PMPCB-204ENST00000444457 FBXO44Q9H4M3 255 aa18.72■□□□□ 0.59
PMPCB-204ENST00000444457 SP110Q9HB58 689 aa18.72■□□□□ 0.59
PMPCB-204ENST00000444457 PCDH12Q9NPG4 1184 aa18.72■□□□□ 0.59
PMPCB-204ENST00000444457 TRMT13Q9NUP7 481 aaKnown RBP18.72■□□□□ 0.59
PMPCB-204ENST00000444457 ILVBLA1L0T0 632 aa18.71■□□□□ 0.59
PMPCB-204ENST00000444457 A8MT66 165 aa18.71■□□□□ 0.59
PMPCB-204ENST00000444457 IPO13O94829 963 aaKnown RBP18.71■□□□□ 0.59
PMPCB-204ENST00000444457 OAZ2O95190 189 aa18.71■□□□□ 0.59
PMPCB-204ENST00000444457 PAPSS2O95340 614 aaPredicted RBP18.71■□□□□ 0.59
PMPCB-204ENST00000444457 KRT75O95678 551 aa18.71■□□□□ 0.59
PMPCB-204ENST00000444457 IL7RP16871 459 aa18.71■□□□□ 0.59
PMPCB-204ENST00000444457 IHHQ14623 411 aa18.71■□□□□ 0.59
PMPCB-204ENST00000444457 TRIM71Q2Q1W2 868 aaKnown RBP18.71■□□□□ 0.59
PMPCB-204ENST00000444457 SMUG1Q53HV7 270 aa18.71■□□□□ 0.59
PMPCB-204ENST00000444457 RPS27LQ71UM5 84 aaKnown RBP18.71■□□□□ 0.59
PMPCB-204ENST00000444457 LRRC58Q96CX6 371 aa18.71■□□□□ 0.59
PMPCB-204ENST00000444457 C8orf48Q96LL4 319 aa18.71■□□□□ 0.59
PMPCB-204ENST00000444457 CYP4F12Q9HCS2 524 aa18.71■□□□□ 0.59
PMPCB-204ENST00000444457 POLE4Q9NR33 117 aa18.71■□□□□ 0.59
PMPCB-204ENST00000444457 NOD1Q9Y239 953 aa18.71■□□□□ 0.59
PMPCB-204ENST00000444457 TIMM22Q9Y584 194 aa18.71■□□□□ 0.59
PMPCB-204ENST00000444457 SPO11Q9Y5K1 396 aa18.71■□□□□ 0.59
PMPCB-204ENST00000444457 VWA8A3KMH1 1905 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms