RNA–Protein interactions for RNA: ENST00000443816.5

FN1-211, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-211ENST00000443816 FCF1Q9Y324 198 aaKnown RBP11.12□□□□□ -0.63
FN1-211ENST00000443816 PRKAB1Q9Y478 270 aa11.12□□□□□ -0.63
FN1-211ENST00000443816 CNTRLQ7Z7A1 2325 aa11.12□□□□□ -0.63
FN1-211ENST00000443816 MFSD11O43934 449 aa11.12□□□□□ -0.63
FN1-211ENST00000443816 GMFGO60234 142 aa11.12□□□□□ -0.63
FN1-211ENST00000443816 CHRNGP07510 517 aa11.12□□□□□ -0.63
FN1-211ENST00000443816 IFI35P80217 286 aaPredicted RBP11.12□□□□□ -0.63
FN1-211ENST00000443816 NOMO1Q15155 1222 aa11.12□□□□□ -0.63
FN1-211ENST00000443816 ADGRF1Q5T601 910 aa11.12□□□□□ -0.63
FN1-211ENST00000443816 NUP54Q7Z3B4 507 aa11.12□□□□□ -0.63
FN1-211ENST00000443816 RBPJLQ9UBG7 517 aa11.12□□□□□ -0.63
FN1-211ENST00000443816 G3V2T6 193 aa11.12□□□□□ -0.63
FN1-211ENST00000443816 SNAP91O60641 907 aa11.12□□□□□ -0.63
FN1-211ENST00000443816 PLGP00747 810 aaPredicted RBP11.12□□□□□ -0.63
FN1-211ENST00000443816 RAPSNQ13702 412 aa11.12□□□□□ -0.63
FN1-211ENST00000443816 P4HA3Q7Z4N8 544 aa11.12□□□□□ -0.63
FN1-211ENST00000443816 ATCAYQ86WG3 371 aa11.12□□□□□ -0.63
FN1-211ENST00000443816 OR7D4Q8NG98 312 aa11.12□□□□□ -0.63
FN1-211ENST00000443816 CREBZFQ9NS37 354 aa11.12□□□□□ -0.63
FN1-211ENST00000443816 SPATA2Q9UM82 520 aa11.12□□□□□ -0.63
FN1-211ENST00000443816 IRS2Q9Y4H2 1338 aa11.12□□□□□ -0.63
FN1-211ENST00000443816 SLC10A6Q3KNW5 377 aa11.12□□□□□ -0.63
FN1-211ENST00000443816 SLC30A8Q8IWU4 369 aa11.12□□□□□ -0.63
FN1-211ENST00000443816 LIX1Q8N485 282 aa11.12□□□□□ -0.63
FN1-211ENST00000443816 EEF1AKMT1Q8WVE0 214 aa11.12□□□□□ -0.63
FN1-211ENST00000443816 GPER1Q99527 375 aa11.12□□□□□ -0.63
FN1-211ENST00000443816 XPR1Q9UBH6 696 aa11.12□□□□□ -0.63
FN1-211ENST00000443816 MCM8Q9UJA3 840 aa11.12□□□□□ -0.63
FN1-211ENST00000443816 KIAA0100Q14667 2235 aaKnown RBP11.12□□□□□ -0.63
FN1-211ENST00000443816 SERPINA6P08185 405 aa11.12□□□□□ -0.63
FN1-211ENST00000443816 KCNA5P22460 613 aa11.12□□□□□ -0.63
FN1-211ENST00000443816 CSKP41240 450 aa11.12□□□□□ -0.63
FN1-211ENST00000443816 OMPP47874 163 aa11.12□□□□□ -0.63
FN1-211ENST00000443816 DAOAP59103 153 aa11.12□□□□□ -0.63
FN1-211ENST00000443816 C1QTNF8P60827 252 aa11.12□□□□□ -0.63
FN1-211ENST00000443816 DSC2Q02487 901 aa11.12□□□□□ -0.63
FN1-211ENST00000443816 ERICH5Q6P6B1 374 aa11.12□□□□□ -0.63
FN1-211ENST00000443816 ZCCHC12Q6PEW1 402 aa11.12□□□□□ -0.63
FN1-211ENST00000443816 SLC29A4Q7RTT9 530 aa11.12□□□□□ -0.63
FN1-211ENST00000443816 CIR1Q86X95 450 aaPredicted RBP11.12□□□□□ -0.63
FN1-211ENST00000443816 TMEM192Q8IY95 271 aa11.12□□□□□ -0.63
FN1-211ENST00000443816 FBXO15Q8NCQ5 510 aaPredicted RBP11.12□□□□□ -0.63
FN1-211ENST00000443816 ART4Q93070 314 aa11.12□□□□□ -0.63
FN1-211ENST00000443816 KREMEN1Q96MU8 473 aa11.12□□□□□ -0.63
FN1-211ENST00000443816 HOPXQ9BPY8 73 aaPredicted RBP11.12□□□□□ -0.63
FN1-211ENST00000443816 GRIP2Q9C0E4 1043 aa11.12□□□□□ -0.63
FN1-211ENST00000443816 PIGUQ9H490 435 aa11.12□□□□□ -0.63
FN1-211ENST00000443816 SCML2Q9UQR0 700 aa11.12□□□□□ -0.63
FN1-211ENST00000443816 CLCA3PQ9Y6N3 262 aa11.12□□□□□ -0.63
FN1-211ENST00000443816 TCRBV9S1A1TA0A576 114 aa11.12□□□□□ -0.63
FN1-211ENST00000443816 UROSP10746 265 aa11.12□□□□□ -0.63
FN1-211ENST00000443816 CORO7P57737 925 aa11.12□□□□□ -0.63
FN1-211ENST00000443816 ELOAQ14241 798 aaKnown RBP11.12□□□□□ -0.63
FN1-211ENST00000443816 RNASEH2BQ5TBB1 312 aaKnown RBP11.12□□□□□ -0.63
FN1-211ENST00000443816 PJA1Q8NG27 643 aa11.12□□□□□ -0.63
FN1-211ENST00000443816 MBOAT7Q96N66 472 aa11.12□□□□□ -0.63
FN1-211ENST00000443816 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.12□□□□□ -0.63
FN1-211ENST00000443816 NUAK2Q9H093 628 aa11.12□□□□□ -0.63
FN1-211ENST00000443816 BTBD1Q9H0C5 482 aa11.12□□□□□ -0.63
FN1-211ENST00000443816 PTGFRNQ9P2B2 879 aa11.12□□□□□ -0.63
FN1-211ENST00000443816 SNX7Q9UNH6 387 aa11.12□□□□□ -0.63
FN1-211ENST00000443816 LRIG2O94898 1065 aa11.12□□□□□ -0.63
FN1-211ENST00000443816 CHRNA1P02708 482 aa11.12□□□□□ -0.63
FN1-211ENST00000443816 HOXB2P14652 356 aa11.12□□□□□ -0.63
FN1-211ENST00000443816 SLC34A1Q06495 639 aa11.12□□□□□ -0.63
FN1-211ENST00000443816 EIPR1Q53HC9 387 aa11.12□□□□□ -0.63
FN1-211ENST00000443816 SCIMPQ6UWF3 145 aa11.12□□□□□ -0.63
FN1-211ENST00000443816 BPIFB1Q8TDL5 484 aa11.12□□□□□ -0.63
FN1-211ENST00000443816 RAD9AQ99638 391 aa11.12□□□□□ -0.63
FN1-211ENST00000443816 LPIN3Q9BQK8 851 aa11.12□□□□□ -0.63
FN1-211ENST00000443816 FUCA2Q9BTY2 467 aa11.12□□□□□ -0.63
FN1-211ENST00000443816 C1orf50Q9BV19 199 aa11.12□□□□□ -0.63
FN1-211ENST00000443816 CDH7Q9ULB5 785 aa11.12□□□□□ -0.63
FN1-211ENST00000443816 GNAZP19086 355 aa11.11□□□□□ -0.63
FN1-211ENST00000443816 TMED10P49755 219 aaKnown RBP11.11□□□□□ -0.63
FN1-211ENST00000443816 CLCN7P51798 805 aa11.11□□□□□ -0.63
FN1-211ENST00000443816 PLGLB1Q02325 96 aa11.11□□□□□ -0.63
FN1-211ENST00000443816 FAM46DQ8NEK8 389 aa11.11□□□□□ -0.63
FN1-211ENST00000443816 MIEF2Q96C03 454 aa11.11□□□□□ -0.63
FN1-211ENST00000443816 DGAT2Q96PD7 388 aa11.11□□□□□ -0.63
FN1-211ENST00000443816 ANKHQ9HCJ1 492 aa11.11□□□□□ -0.63
FN1-211ENST00000443816 TAF4O00268 1085 aa11.11□□□□□ -0.63
FN1-211ENST00000443816 FFAR2O15552 330 aa11.11□□□□□ -0.63
FN1-211ENST00000443816 CRHR1P34998 444 aa11.11□□□□□ -0.63
FN1-211ENST00000443816 ARFIP1P53367 373 aa11.11□□□□□ -0.63
FN1-211ENST00000443816 MPP5Q8N3R9 675 aa11.11□□□□□ -0.63
FN1-211ENST00000443816 IPCEF1Q8WWN9 437 aaPredicted RBP11.11□□□□□ -0.63
FN1-211ENST00000443816 GAL3ST4Q96RP7 486 aa11.11□□□□□ -0.63
FN1-211ENST00000443816 LDAHQ9H6V9 325 aa11.11□□□□□ -0.63
FN1-211ENST00000443816 IRAK3Q9Y616 596 aa11.11□□□□□ -0.63
FN1-211ENST00000443816 KLRG2A4D1S0 409 aaPredicted RBP11.11□□□□□ -0.63
FN1-211ENST00000443816 SEMA5AQ13591 1074 aa11.11□□□□□ -0.63
FN1-211ENST00000443816 HNRNPDQ14103 355 aaKnown RBP11.11□□□□□ -0.63
FN1-211ENST00000443816 NEDD8Q15843 81 aa11.11□□□□□ -0.63
FN1-211ENST00000443816 FBXO42Q6P3S6 717 aa11.11□□□□□ -0.63
FN1-211ENST00000443816 POMZP3Q6PJE2 187 aa11.11□□□□□ -0.63
FN1-211ENST00000443816 DAW1Q8N136 415 aa11.11□□□□□ -0.63
FN1-211ENST00000443816 KLK6Q92876 244 aa11.11□□□□□ -0.63
FN1-211ENST00000443816 ZBED6CLQ96FA7 236 aaPredicted RBP11.11□□□□□ -0.63
FN1-211ENST00000443816 TCAF1Q9Y4C2 921 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms