RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 PUM1Q14671 1186 aaKnown RBP eCLIP15.79■□□□□ 0.12
USP39-205ENST00000442708 TRIP6Q15654 476 aaKnown RBP15.79■□□□□ 0.12
USP39-205ENST00000442708 C6orf132Q5T0Z8 1188 aa15.79■□□□□ 0.12
USP39-205ENST00000442708 LVRNQ6Q4G3 990 aa15.79■□□□□ 0.12
USP39-205ENST00000442708 TRAPPC5Q8IUR0 188 aa15.79■□□□□ 0.12
USP39-205ENST00000442708 SLC35F3Q8IY50 421 aa15.79■□□□□ 0.12
USP39-205ENST00000442708 PDIK1LQ8N165 341 aa15.79■□□□□ 0.12
USP39-205ENST00000442708 SDR16C5Q8N3Y7 309 aa15.79■□□□□ 0.12
USP39-205ENST00000442708 CLDN19Q8N6F1 224 aa15.79■□□□□ 0.12
USP39-205ENST00000442708 CEP112Q8N8E3 955 aa15.79■□□□□ 0.12
USP39-205ENST00000442708 FAM181AQ8N9Y4 354 aa15.79■□□□□ 0.12
USP39-205ENST00000442708 KYQ8NBH2 561 aa15.79■□□□□ 0.12
USP39-205ENST00000442708 BBOF1Q8ND07 529 aa15.79■□□□□ 0.12
USP39-205ENST00000442708 FAM46DQ8NEK8 389 aa15.79■□□□□ 0.12
USP39-205ENST00000442708 FBXO25Q8TCJ0 367 aa15.79■□□□□ 0.12
USP39-205ENST00000442708 TTC25Q96NG3 672 aa15.79■□□□□ 0.12
USP39-205ENST00000442708 ZCCHC2Q9C0B9 1178 aaKnown RBP15.79■□□□□ 0.12
USP39-205ENST00000442708 KLC4Q9NSK0 619 aa15.79■□□□□ 0.12
USP39-205ENST00000442708 CATSPERZQ9NTU4 200 aa15.79■□□□□ 0.12
USP39-205ENST00000442708 SIRPGQ9P1W8 387 aa15.79■□□□□ 0.12
USP39-205ENST00000442708 GULP1Q9UBP9 304 aa15.79■□□□□ 0.12
USP39-205ENST00000442708 FTSJ1Q9UET6 329 aa15.79■□□□□ 0.12
USP39-205ENST00000442708 TBC1D29Q9UFV1 150 aa15.79■□□□□ 0.12
USP39-205ENST00000442708 GPR34Q9UPC5 381 aa15.79■□□□□ 0.12
USP39-205ENST00000442708 DOLKQ9UPQ8 538 aa15.79■□□□□ 0.12
USP39-205ENST00000442708 CHMP2BQ9UQN3 213 aa15.79■□□□□ 0.12
USP39-205ENST00000442708 E7ESA3 106 aa15.78■□□□□ 0.12
USP39-205ENST00000442708 NOBOXO60393 691 aa15.78■□□□□ 0.12
USP39-205ENST00000442708 POP7O75817 140 aaKnown RBP15.78■□□□□ 0.12
USP39-205ENST00000442708 USP1O94782 785 aa15.78■□□□□ 0.12
USP39-205ENST00000442708 ALPPL2P10696 532 aa15.78■□□□□ 0.12
USP39-205ENST00000442708 CEACAM1P13688 526 aa15.78■□□□□ 0.12
USP39-205ENST00000442708 PGAM1P18669 254 aa15.78■□□□□ 0.12
USP39-205ENST00000442708 PLTPP55058 493 aa15.78■□□□□ 0.12
USP39-205ENST00000442708 PDIA2Q13087 525 aaKnown RBP15.78■□□□□ 0.12
USP39-205ENST00000442708 LRP8Q14114 963 aa15.78■□□□□ 0.12
USP39-205ENST00000442708 CRYMQ14894 314 aa15.78■□□□□ 0.12
USP39-205ENST00000442708 BCL7AQ4VC05 210 aa15.78■□□□□ 0.12
USP39-205ENST00000442708 FASTKD1Q53R41 847 aaKnown RBP15.78■□□□□ 0.12
USP39-205ENST00000442708 ZCCHC8Q6NZY4 707 aaKnown RBP15.78■□□□□ 0.12
USP39-205ENST00000442708 OGFOD3Q6PK18 319 aa15.78■□□□□ 0.12
USP39-205ENST00000442708 PACS1Q6VY07 963 aa15.78■□□□□ 0.12
USP39-205ENST00000442708 FAM83HQ6ZRV2 1179 aaPredicted RBP15.78■□□□□ 0.12
USP39-205ENST00000442708 GLRX5Q86SX6 157 aa15.78■□□□□ 0.12
USP39-205ENST00000442708 ANKMY2Q8IV38 441 aa15.78■□□□□ 0.12
USP39-205ENST00000442708 PATE1Q8WXA2 126 aa15.78■□□□□ 0.12
USP39-205ENST00000442708 DCUN1D1Q96GG9 259 aa15.78■□□□□ 0.12
USP39-205ENST00000442708 CDC6Q99741 560 aa15.78■□□□□ 0.12
USP39-205ENST00000442708 TIMM29Q9BSF4 260 aa15.78■□□□□ 0.12
USP39-205ENST00000442708 DUSP23Q9BVJ7 150 aa15.78■□□□□ 0.12
USP39-205ENST00000442708 SLC32A1Q9H598 525 aa15.78■□□□□ 0.12
USP39-205ENST00000442708 ZDHHC18Q9NUE0 388 aa15.78■□□□□ 0.12
USP39-205ENST00000442708 DNAJC16Q9Y2G8 782 aa15.78■□□□□ 0.12
USP39-205ENST00000442708 FAM169AQ9Y6X4 670 aa15.78■□□□□ 0.12
USP39-205ENST00000442708 A6NCN8 305 aa15.77■□□□□ 0.12
USP39-205ENST00000442708 B4DGG1 531 aa15.77■□□□□ 0.12
USP39-205ENST00000442708 TNFSF14O43557 240 aa15.77■□□□□ 0.12
USP39-205ENST00000442708 PBLDP30039 288 aaPredicted RBP15.77■□□□□ 0.12
USP39-205ENST00000442708 INSCQ1MX18 579 aa15.77■□□□□ 0.12
USP39-205ENST00000442708 ZNF658BQ4V348 819 aaPredicted RBP15.77■□□□□ 0.12
USP39-205ENST00000442708 ZNF789Q5FWF6 425 aa15.77■□□□□ 0.12
USP39-205ENST00000442708 UNC5AQ6ZN44 842 aa15.77■□□□□ 0.12
USP39-205ENST00000442708 SLCO6A1Q86UG4 719 aa15.77■□□□□ 0.12
USP39-205ENST00000442708 GPR156Q8NFN8 814 aa15.77■□□□□ 0.12
USP39-205ENST00000442708 GPR150Q8NGU9 434 aa15.77■□□□□ 0.12
USP39-205ENST00000442708 DPEP2Q9H4A9 486 aa15.77■□□□□ 0.12
USP39-205ENST00000442708 EPB41L5Q9HCM4 733 aa15.77■□□□□ 0.12
USP39-205ENST00000442708 PRDM8Q9NQV8 689 aa15.77■□□□□ 0.12
USP39-205ENST00000442708 ASXL3Q9C0F0 2248 aa15.76■□□□□ 0.11
USP39-205ENST00000442708 CASC3O15234 703 aaKnown RBP15.76■□□□□ 0.11
USP39-205ENST00000442708 POLBP06746 335 aa15.76■□□□□ 0.11
USP39-205ENST00000442708 RALBP11234 206 aa15.76■□□□□ 0.11
USP39-205ENST00000442708 CKMT1AP12532 417 aa15.76■□□□□ 0.11
USP39-205ENST00000442708 CKMT2P17540 419 aa15.76■□□□□ 0.11
USP39-205ENST00000442708 KCNA4P22459 653 aa15.76■□□□□ 0.11
USP39-205ENST00000442708 PRLHRP49683 370 aa15.76■□□□□ 0.11
USP39-205ENST00000442708 ACADVLP49748 655 aa15.76■□□□□ 0.11
USP39-205ENST00000442708 CLCNKAP51800 687 aa15.76■□□□□ 0.11
USP39-205ENST00000442708 MAZP56270 477 aaKnown RBP15.76■□□□□ 0.11
USP39-205ENST00000442708 SIM1P81133 766 aaPredicted RBP15.76■□□□□ 0.11
USP39-205ENST00000442708 NFE2L1Q14494 772 aa15.76■□□□□ 0.11
USP39-205ENST00000442708 ITIH4Q14624 930 aa15.76■□□□□ 0.11
USP39-205ENST00000442708 LONRF1Q17RB8 773 aa15.76■□□□□ 0.11
USP39-205ENST00000442708 GLE1Q53GS7 698 aaKnown RBP15.76■□□□□ 0.11
USP39-205ENST00000442708 PPM1JQ5JR12 505 aa15.76■□□□□ 0.11
USP39-205ENST00000442708 LYPLAL1Q5VWZ2 237 aa15.76■□□□□ 0.11
USP39-205ENST00000442708 STEAP4Q687X5 459 aa15.76■□□□□ 0.11
USP39-205ENST00000442708 NEPROQ6NW34 567 aa15.76■□□□□ 0.11
USP39-205ENST00000442708 GUSBP11Q6P575 273 aa15.76■□□□□ 0.11
USP39-205ENST00000442708 CERS6Q6ZMG9 384 aa15.76■□□□□ 0.11
USP39-205ENST00000442708 CENPUQ71F23 418 aa15.76■□□□□ 0.11
USP39-205ENST00000442708 C17orf82Q86X59 251 aaPredicted RBP15.76■□□□□ 0.11
USP39-205ENST00000442708 NAGSQ8N159 534 aa15.76■□□□□ 0.11
USP39-205ENST00000442708 LILRA3Q8N6C8 439 aaPredicted RBP15.76■□□□□ 0.11
USP39-205ENST00000442708 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.76■□□□□ 0.11
USP39-205ENST00000442708 FBXO36Q8NEA4 188 aa15.76■□□□□ 0.11
USP39-205ENST00000442708 ZDHHC1Q8WTX9 485 aa15.76■□□□□ 0.11
USP39-205ENST00000442708 HEXDCQ8WVB3 486 aa15.76■□□□□ 0.11
USP39-205ENST00000442708 SCG3Q8WXD2 468 aaKnown RBP15.76■□□□□ 0.11
USP39-205ENST00000442708 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms