RNA–Protein interactions for RNA: ENST00000442572.1

CDCA4P3-201, Transcript of cell division cycle associated 4 pseudogene 3, humanhuman

BASIC

Gene CDCA4P3, Length 689 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4P3-201ENST00000442572 QSOX1O00391 747 aa12.34□□□□□ -0.43
CDCA4P3-201ENST00000442572 B4GAT1O43505 415 aa12.34□□□□□ -0.43
CDCA4P3-201ENST00000442572 ETS1P14921 441 aa12.34□□□□□ -0.43
CDCA4P3-201ENST00000442572 TPH1P17752 444 aa12.34□□□□□ -0.43
CDCA4P3-201ENST00000442572 TPSB2P20231 275 aa12.34□□□□□ -0.43
CDCA4P3-201ENST00000442572 ALDH4A1P30038 563 aa12.34□□□□□ -0.43
CDCA4P3-201ENST00000442572 MC4RP32245 332 aa12.34□□□□□ -0.43
CDCA4P3-201ENST00000442572 HALP42357 657 aa12.34□□□□□ -0.43
CDCA4P3-201ENST00000442572 MAGEA6P43360 314 aa12.34□□□□□ -0.43
CDCA4P3-201ENST00000442572 NPY2RP49146 381 aa12.34□□□□□ -0.43
CDCA4P3-201ENST00000442572 FNTAP49354 379 aa12.34□□□□□ -0.43
CDCA4P3-201ENST00000442572 PDX1P52945 283 aa12.34□□□□□ -0.43
CDCA4P3-201ENST00000442572 SARNPP82979 210 aaKnown RBP12.34□□□□□ -0.43
CDCA4P3-201ENST00000442572 ACVR1Q04771 509 aa12.34□□□□□ -0.43
CDCA4P3-201ENST00000442572 ZFP36L1Q07352 338 aaKnown RBP12.34□□□□□ -0.43
CDCA4P3-201ENST00000442572 CCDC173Q0VFZ6 552 aa12.34□□□□□ -0.43
CDCA4P3-201ENST00000442572 TRA2AQ13595 282 aaKnown RBP eCLIP12.34□□□□□ -0.43
CDCA4P3-201ENST00000442572 SEPT6Q14141 434 aa12.34□□□□□ -0.43
CDCA4P3-201ENST00000442572 TPSAB1Q15661 275 aa12.34□□□□□ -0.43
CDCA4P3-201ENST00000442572 LYPLAL1Q5VWZ2 237 aa12.34□□□□□ -0.43
CDCA4P3-201ENST00000442572 TMEM220Q6QAJ8 160 aa12.34□□□□□ -0.43
CDCA4P3-201ENST00000442572 SFTPA2Q8IWL1 248 aa12.34□□□□□ -0.43
CDCA4P3-201ENST00000442572 Q8N9G6 341 aaPredicted RBP12.34□□□□□ -0.43
CDCA4P3-201ENST00000442572 GLIS1Q8NBF1 620 aa12.34□□□□□ -0.43
CDCA4P3-201ENST00000442572 SNIP1Q8TAD8 396 aaKnown RBP12.34□□□□□ -0.43
CDCA4P3-201ENST00000442572 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.34□□□□□ -0.43
CDCA4P3-201ENST00000442572 MAGOHBQ96A72 148 aaKnown RBP12.34□□□□□ -0.43
CDCA4P3-201ENST00000442572 ZNF578Q96N58 590 aaPredicted RBP12.34□□□□□ -0.43
CDCA4P3-201ENST00000442572 TTC1Q99614 292 aa12.34□□□□□ -0.43
CDCA4P3-201ENST00000442572 SLC38A3Q99624 504 aa12.34□□□□□ -0.43
CDCA4P3-201ENST00000442572 COPS8Q99627 209 aa12.34□□□□□ -0.43
CDCA4P3-201ENST00000442572 IL22Q9GZX6 179 aa12.34□□□□□ -0.43
CDCA4P3-201ENST00000442572 SYNDIG1Q9H7V2 258 aa12.34□□□□□ -0.43
CDCA4P3-201ENST00000442572 VPS37BQ9H9H4 285 aa12.34□□□□□ -0.43
CDCA4P3-201ENST00000442572 POT1Q9NUX5 634 aa12.34□□□□□ -0.43
CDCA4P3-201ENST00000442572 ZDHHC3Q9NYG2 299 aa12.34□□□□□ -0.43
CDCA4P3-201ENST00000442572 KCNK4Q9NYG8 393 aa12.34□□□□□ -0.43
CDCA4P3-201ENST00000442572 CPNE7Q9UBL6 633 aa12.34□□□□□ -0.43
CDCA4P3-201ENST00000442572 ACSL5Q9ULC5 683 aa12.34□□□□□ -0.43
CDCA4P3-201ENST00000442572 PCDHB1Q9Y5F3 818 aa12.34□□□□□ -0.43
CDCA4P3-201ENST00000442572 APC2O95996 2303 aa12.34□□□□□ -0.43
CDCA4P3-201ENST00000442572 URB1O60287 2271 aaKnown RBP12.34□□□□□ -0.43
CDCA4P3-201ENST00000442572 IGHV1OR21-1A0A087WYE8 117 aa12.33□□□□□ -0.44
CDCA4P3-201ENST00000442572 C17orf113A0A1B0GUU1 675 aa12.33□□□□□ -0.44
CDCA4P3-201ENST00000442572 MGAT4DA6NG13 374 aa12.33□□□□□ -0.44
CDCA4P3-201ENST00000442572 F8W8V4 182 aa12.33□□□□□ -0.44
CDCA4P3-201ENST00000442572 GPR39O43194 453 aa12.33□□□□□ -0.44
CDCA4P3-201ENST00000442572 DUX1O43812 170 aa12.33□□□□□ -0.44
CDCA4P3-201ENST00000442572 SNX2O60749 519 aa12.33□□□□□ -0.44
CDCA4P3-201ENST00000442572 PHF2O75151 1096 aa12.33□□□□□ -0.44
CDCA4P3-201ENST00000442572 POP7O75817 140 aaKnown RBP12.33□□□□□ -0.44
CDCA4P3-201ENST00000442572 EML2O95834 649 aa12.33□□□□□ -0.44
CDCA4P3-201ENST00000442572 ACRV1P26436 265 aa12.33□□□□□ -0.44
CDCA4P3-201ENST00000442572 CD1CP29017 333 aa12.33□□□□□ -0.44
CDCA4P3-201ENST00000442572 PPARGP37231 505 aaPredicted RBP12.33□□□□□ -0.44
CDCA4P3-201ENST00000442572 KCNJ1P48048 391 aa12.33□□□□□ -0.44
CDCA4P3-201ENST00000442572 PRLHRP49683 370 aa12.33□□□□□ -0.44
CDCA4P3-201ENST00000442572 CTSCP53634 463 aa12.33□□□□□ -0.44
CDCA4P3-201ENST00000442572 OR1D5P58170 312 aa12.33□□□□□ -0.44
CDCA4P3-201ENST00000442572 UBE2IP63279 158 aaKnown RBP12.33□□□□□ -0.44
CDCA4P3-201ENST00000442572 GABREP78334 506 aa12.33□□□□□ -0.44
CDCA4P3-201ENST00000442572 BASP1P80723 227 aaKnown RBP12.33□□□□□ -0.44
CDCA4P3-201ENST00000442572 ITIH4Q14624 930 aa12.33□□□□□ -0.44
CDCA4P3-201ENST00000442572 TBC1D25Q3MII6 688 aa12.33□□□□□ -0.44
CDCA4P3-201ENST00000442572 MAP9Q49MG5 647 aa12.33□□□□□ -0.44
CDCA4P3-201ENST00000442572 ZRANB3Q5FWF4 1079 aa12.33□□□□□ -0.44
CDCA4P3-201ENST00000442572 PCID2Q5JVF3 399 aa12.33□□□□□ -0.44
CDCA4P3-201ENST00000442572 TSTD2Q5T7W7 516 aa12.33□□□□□ -0.44
CDCA4P3-201ENST00000442572 METRNLQ641Q3 311 aa12.33□□□□□ -0.44
CDCA4P3-201ENST00000442572 CCDC137Q6PK04 289 aaKnown RBP12.33□□□□□ -0.44
CDCA4P3-201ENST00000442572 WDR74Q6RFH5 385 aaPredicted RBP12.33□□□□□ -0.44
CDCA4P3-201ENST00000442572 CERS6Q6ZMG9 384 aa12.33□□□□□ -0.44
CDCA4P3-201ENST00000442572 SLITRK4Q8IW52 837 aa12.33□□□□□ -0.44
CDCA4P3-201ENST00000442572 TAB3Q8N5C8 712 aaPredicted RBP12.33□□□□□ -0.44
CDCA4P3-201ENST00000442572 PPHLN1Q8NEY8 458 aaKnown RBP12.33□□□□□ -0.44
CDCA4P3-201ENST00000442572 OR4D9Q8NGE8 314 aa12.33□□□□□ -0.44
CDCA4P3-201ENST00000442572 OR2L2Q8NH16 312 aa12.33□□□□□ -0.44
CDCA4P3-201ENST00000442572 OR10G6Q8NH81 332 aa12.33□□□□□ -0.44
CDCA4P3-201ENST00000442572 ATXN7L3BQ96GX2 97 aa12.33□□□□□ -0.44
CDCA4P3-201ENST00000442572 B3GNT4Q9C0J1 378 aa12.33□□□□□ -0.44
CDCA4P3-201ENST00000442572 PRDM8Q9NQV8 689 aa12.33□□□□□ -0.44
CDCA4P3-201ENST00000442572 THSD1Q9NS62 852 aa12.33□□□□□ -0.44
CDCA4P3-201ENST00000442572 KCND1Q9NSA2 647 aa12.33□□□□□ -0.44
CDCA4P3-201ENST00000442572 BFARQ9NZS9 450 aa12.33□□□□□ -0.44
CDCA4P3-201ENST00000442572 AKAP7Q9P0M2 348 aaPredicted RBP12.33□□□□□ -0.44
CDCA4P3-201ENST00000442572 TCAF1Q9Y4C2 921 aa12.33□□□□□ -0.44
CDCA4P3-201ENST00000442572 BPTFQ12830 3046 aa12.33□□□□□ -0.44
CDCA4P3-201ENST00000442572 FRYQ5TBA9 3013 aa12.33□□□□□ -0.44
CDCA4P3-201ENST00000442572 CACNA1BQ00975 2339 aa12.33□□□□□ -0.44
CDCA4P3-201ENST00000442572 ANKRD11Q6UB99 2663 aaPredicted RBP12.33□□□□□ -0.44
CDCA4P3-201ENST00000442572 OR2AG2A6NM03 316 aa12.32□□□□□ -0.44
CDCA4P3-201ENST00000442572 SRRM3A6NNA2 597 aaPredicted RBP12.32□□□□□ -0.44
CDCA4P3-201ENST00000442572 PDZK1P1A8MUH7 402 aa12.32□□□□□ -0.44
CDCA4P3-201ENST00000442572 HGSO14964 777 aaPredicted RBP12.32□□□□□ -0.44
CDCA4P3-201ENST00000442572 BRINP1O60477 761 aa12.32□□□□□ -0.44
CDCA4P3-201ENST00000442572 AP2A2O94973 939 aa12.32□□□□□ -0.44
CDCA4P3-201ENST00000442572 VIPP01282 170 aa12.32□□□□□ -0.44
CDCA4P3-201ENST00000442572 KRT14P02533 472 aa12.32□□□□□ -0.44
CDCA4P3-201ENST00000442572 ZSCAN5DPP0CG00 497 aa12.32□□□□□ -0.44
CDCA4P3-201ENST00000442572 ATP1B2P14415 290 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms