RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 GFERP55789 205 aa11.58□□□□□ -0.56
TTC28-203ENST00000442232 POLE2P56282 527 aa11.58□□□□□ -0.56
TTC28-203ENST00000442232 TMEM115Q12893 351 aaPredicted RBP11.58□□□□□ -0.56
TTC28-203ENST00000442232 KCNAB2Q13303 367 aa11.58□□□□□ -0.56
TTC28-203ENST00000442232 MPP3Q13368 585 aa11.58□□□□□ -0.56
TTC28-203ENST00000442232 LLGL1Q15334 1064 aa11.58□□□□□ -0.56
TTC28-203ENST00000442232 SPA17Q15506 151 aa11.58□□□□□ -0.56
TTC28-203ENST00000442232 ATP13A5Q4VNC0 1218 aa11.58□□□□□ -0.56
TTC28-203ENST00000442232 SIRPB2Q5JXA9 342 aa11.58□□□□□ -0.56
TTC28-203ENST00000442232 AGAP9Q5VTM2 703 aa11.58□□□□□ -0.56
TTC28-203ENST00000442232 ITPRIPL1Q6GPH6 555 aa11.58□□□□□ -0.56
TTC28-203ENST00000442232 IRGCQ6NXR0 463 aa11.58□□□□□ -0.56
TTC28-203ENST00000442232 KLHL35Q6PF15 583 aa11.58□□□□□ -0.56
TTC28-203ENST00000442232 RASGRP3Q8IV61 690 aa11.58□□□□□ -0.56
TTC28-203ENST00000442232 KATNAL2Q8IYT4 538 aa11.58□□□□□ -0.56
TTC28-203ENST00000442232 RCOR2Q8IZ40 523 aa11.58□□□□□ -0.56
TTC28-203ENST00000442232 IPMKQ8NFU5 416 aa11.58□□□□□ -0.56
TTC28-203ENST00000442232 LRRC45Q96CN5 670 aa11.58□□□□□ -0.56
TTC28-203ENST00000442232 STAMBPL1Q96FJ0 436 aa11.58□□□□□ -0.56
TTC28-203ENST00000442232 QKIQ96PU8 341 aaKnown RBP eCLIP11.58□□□□□ -0.56
TTC28-203ENST00000442232 APMAPQ9HDC9 416 aa11.58□□□□□ -0.56
TTC28-203ENST00000442232 SCHIP1Q9P0W5 487 aaPredicted RBP11.58□□□□□ -0.56
TTC28-203ENST00000442232 SAE1Q9UBE0 346 aaPredicted RBP11.58□□□□□ -0.56
TTC28-203ENST00000442232 TRIM10Q9UDY6 481 aa11.58□□□□□ -0.56
TTC28-203ENST00000442232 SLC23A2Q9UGH3 650 aa11.58□□□□□ -0.56
TTC28-203ENST00000442232 TRHDEQ9UKU6 1024 aa11.58□□□□□ -0.56
TTC28-203ENST00000442232 TMEM184BQ9Y519 407 aaPredicted RBP11.58□□□□□ -0.56
TTC28-203ENST00000442232 ALG6Q9Y672 507 aa11.58□□□□□ -0.56
TTC28-203ENST00000442232 MYO18BQ8IUG5 2567 aa11.57□□□□□ -0.56
TTC28-203ENST00000442232 ASH1LQ9NR48 2969 aaKnown RBP11.57□□□□□ -0.56
TTC28-203ENST00000442232 hCG_1818297A0A087WSY0 165 aa11.57□□□□□ -0.56
TTC28-203ENST00000442232 GLYATL1P3A0A0U1RQE8 302 aa11.57□□□□□ -0.56
TTC28-203ENST00000442232 LOC285095A0A1B0GVY8 99 aa11.57□□□□□ -0.56
TTC28-203ENST00000442232 OR52A4PA6NMU1 304 aa11.57□□□□□ -0.56
TTC28-203ENST00000442232 H7C0C1 242 aa11.57□□□□□ -0.56
TTC28-203ENST00000442232 PYCARD-AS1I3L0S3 204 aa11.57□□□□□ -0.56
TTC28-203ENST00000442232 AURKAO14965 403 aa11.57□□□□□ -0.56
TTC28-203ENST00000442232 STX7O15400 261 aaKnown RBP11.57□□□□□ -0.56
TTC28-203ENST00000442232 IPO7O95373 1038 aaKnown RBP11.57□□□□□ -0.56
TTC28-203ENST00000442232 MSH3P20585 1137 aa11.57□□□□□ -0.56
TTC28-203ENST00000442232 CTNNA2P26232 953 aa11.57□□□□□ -0.56
TTC28-203ENST00000442232 CYLC1P35663 651 aaPredicted RBP11.57□□□□□ -0.56
TTC28-203ENST00000442232 CETN2P41208 172 aa11.57□□□□□ -0.56
TTC28-203ENST00000442232 ATP5OP48047 213 aa11.57□□□□□ -0.56
TTC28-203ENST00000442232 ARL4DP49703 201 aa11.57□□□□□ -0.56
TTC28-203ENST00000442232 GEMP55040 296 aa11.57□□□□□ -0.56
TTC28-203ENST00000442232 HADHBP55084 474 aaKnown RBP11.57□□□□□ -0.56
TTC28-203ENST00000442232 WASHC5Q12768 1159 aa11.57□□□□□ -0.56
TTC28-203ENST00000442232 CDC20Q12834 499 aa11.57□□□□□ -0.56
TTC28-203ENST00000442232 SEPT6Q14141 434 aa11.57□□□□□ -0.56
TTC28-203ENST00000442232 MAP7Q14244 749 aa11.57□□□□□ -0.56
TTC28-203ENST00000442232 GPR18Q14330 331 aa11.57□□□□□ -0.56
TTC28-203ENST00000442232 CLCA4Q14CN2 919 aa11.57□□□□□ -0.56
TTC28-203ENST00000442232 PLCL1Q15111 1095 aa11.57□□□□□ -0.56
TTC28-203ENST00000442232 FAM182AQ5T1J6 154 aa11.57□□□□□ -0.56
TTC28-203ENST00000442232 CACHD1Q5VU97 1274 aa11.57□□□□□ -0.56
TTC28-203ENST00000442232 C11orf63Q6NUN7 778 aa11.57□□□□□ -0.56
TTC28-203ENST00000442232 KDELC1Q6UW63 502 aa11.57□□□□□ -0.56
TTC28-203ENST00000442232 ABRAXAS1Q6UWZ7 409 aa11.57□□□□□ -0.56
TTC28-203ENST00000442232 FAM151BQ6UXP7 276 aa11.57□□□□□ -0.56
TTC28-203ENST00000442232 WASH2PQ6VEQ5 465 aa11.57□□□□□ -0.56
TTC28-203ENST00000442232 DAAM2Q86T65 1068 aa11.57□□□□□ -0.56
TTC28-203ENST00000442232 AMZ2Q86W34 360 aa11.57□□□□□ -0.56
TTC28-203ENST00000442232 ZNF567Q8N184 647 aa11.57□□□□□ -0.56
TTC28-203ENST00000442232 STARD8Q92502 1023 aa11.57□□□□□ -0.56
TTC28-203ENST00000442232 FCRL5Q96RD9 977 aa11.57□□□□□ -0.56
TTC28-203ENST00000442232 TRIM5Q9C035 493 aa11.57□□□□□ -0.56
TTC28-203ENST00000442232 TRIM4Q9C037 500 aa11.57□□□□□ -0.56
TTC28-203ENST00000442232 ZNF768Q9H5H4 540 aaKnown RBP11.57□□□□□ -0.56
TTC28-203ENST00000442232 WASH6PQ9NQA3 447 aa11.57□□□□□ -0.56
TTC28-203ENST00000442232 ZNF624Q9P2J8 865 aaPredicted RBP11.57□□□□□ -0.56
TTC28-203ENST00000442232 TUBD1Q9UJT1 453 aa11.57□□□□□ -0.56
TTC28-203ENST00000442232 PCDHB3Q9Y5E6 796 aa11.57□□□□□ -0.56
TTC28-203ENST00000442232 LOC101059948A0A1B0GTJ6 334 aa11.56□□□□□ -0.56
TTC28-203ENST00000442232 C2orf81A6NN90 581 aa11.56□□□□□ -0.56
TTC28-203ENST00000442232 ANXA9O76027 345 aa11.56□□□□□ -0.56
TTC28-203ENST00000442232 DLGAP3O95886 979 aa11.56□□□□□ -0.56
TTC28-203ENST00000442232 TCN2P20062 427 aa11.56□□□□□ -0.56
TTC28-203ENST00000442232 PBLDP30039 288 aaPredicted RBP11.56□□□□□ -0.56
TTC28-203ENST00000442232 CD68P34810 354 aaPredicted RBP11.56□□□□□ -0.56
TTC28-203ENST00000442232 STAT5AP42229 794 aa11.56□□□□□ -0.56
TTC28-203ENST00000442232 CSRP3P50461 194 aa11.56□□□□□ -0.56
TTC28-203ENST00000442232 NFKB2Q00653 900 aa11.56□□□□□ -0.56
TTC28-203ENST00000442232 PRPSAP1Q14558 356 aa11.56□□□□□ -0.56
TTC28-203ENST00000442232 IL11RAQ14626 422 aa11.56□□□□□ -0.56
TTC28-203ENST00000442232 NOMO1Q15155 1222 aa11.56□□□□□ -0.56
TTC28-203ENST00000442232 SLC1A5Q15758 541 aa11.56□□□□□ -0.56
TTC28-203ENST00000442232 TAZQ16635 292 aa11.56□□□□□ -0.56
TTC28-203ENST00000442232 LONRF2Q1L5Z9 754 aa11.56□□□□□ -0.56
TTC28-203ENST00000442232 KHDC1Q4VXA5 237 aaKnown RBP11.56□□□□□ -0.56
TTC28-203ENST00000442232 C16orf46Q6P387 395 aa11.56□□□□□ -0.56
TTC28-203ENST00000442232 C6orf15Q6UXA7 325 aaPredicted RBP11.56□□□□□ -0.56
TTC28-203ENST00000442232 FAM92BQ6ZTR7 304 aa11.56□□□□□ -0.56
TTC28-203ENST00000442232 PRSS42Q7Z5A4 293 aa11.56□□□□□ -0.56
TTC28-203ENST00000442232 ZNF547Q8IVP9 402 aa11.56□□□□□ -0.56
TTC28-203ENST00000442232 CDKL3Q8IVW4 592 aaPredicted RBP11.56□□□□□ -0.56
TTC28-203ENST00000442232 CCDC170Q8IYT3 715 aa11.56□□□□□ -0.56
TTC28-203ENST00000442232 UNC5BQ8IZJ1 945 aa11.56□□□□□ -0.56
TTC28-203ENST00000442232 TTC30BQ8N4P2 665 aa11.56□□□□□ -0.56
TTC28-203ENST00000442232 DDHD1Q8NEL9 900 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms