RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 FBXL19Q6PCT2 694 aa8.01□□□□□ -1.13
CCDC39-201ENST00000442201 RGS9BPQ6ZS82 235 aa8.01□□□□□ -1.13
CCDC39-201ENST00000442201 RALGPS2Q86X27 583 aaPredicted RBP8.01□□□□□ -1.13
CCDC39-201ENST00000442201 LRRC34Q8IZ02 419 aa8.01□□□□□ -1.13
CCDC39-201ENST00000442201 SLC44A3Q8N4M1 653 aa8.01□□□□□ -1.13
CCDC39-201ENST00000442201 GPR26Q8NDV2 337 aa8.01□□□□□ -1.13
CCDC39-201ENST00000442201 ZNF398Q8TD17 642 aa8.01□□□□□ -1.13
CCDC39-201ENST00000442201 UTP4Q969X6 686 aaKnown RBP8.01□□□□□ -1.13
CCDC39-201ENST00000442201 RAB3IPQ96QF0 476 aaPredicted RBP8.01□□□□□ -1.13
CCDC39-201ENST00000442201 AARSD1Q9BTE6 412 aaKnown RBP8.01□□□□□ -1.13
CCDC39-201ENST00000442201 C8orf33Q9H7E9 229 aaPredicted RBP8.01□□□□□ -1.13
CCDC39-201ENST00000442201 GPAMQ9HCL2 828 aa8.01□□□□□ -1.13
CCDC39-201ENST00000442201 PRSS16Q9NQE7 514 aa8.01□□□□□ -1.13
CCDC39-201ENST00000442201 ZNF358Q9NW07 568 aa8.01□□□□□ -1.13
CCDC39-201ENST00000442201 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.01□□□□□ -1.13
CCDC39-201ENST00000442201 EMCNQ9ULC0 261 aa8.01□□□□□ -1.13
CCDC39-201ENST00000442201 PIAS3Q9Y6X2 628 aa8.01□□□□□ -1.13
CCDC39-201ENST00000442201 C5orf42Q9H799 3197 aa8□□□□□ -1.13
CCDC39-201ENST00000442201 ANTXRLA6NF34 631 aa8□□□□□ -1.13
CCDC39-201ENST00000442201 GAPDHSO14556 408 aaPredicted RBP8□□□□□ -1.13
CCDC39-201ENST00000442201 PROCP04070 461 aa8□□□□□ -1.13
CCDC39-201ENST00000442201 C1SP09871 688 aa8□□□□□ -1.13
CCDC39-201ENST00000442201 CCDC159P0C7I6 412 aa8□□□□□ -1.13
CCDC39-201ENST00000442201 PKMP14618 531 aaKnown RBP8□□□□□ -1.13
CCDC39-201ENST00000442201 FMO4P31512 558 aa8□□□□□ -1.13
CCDC39-201ENST00000442201 WASP42768 502 aa8□□□□□ -1.13
CCDC39-201ENST00000442201 SPINT3P49223 89 aa8□□□□□ -1.13
CCDC39-201ENST00000442201 KPNA2P52292 529 aaKnown RBP8□□□□□ -1.13
CCDC39-201ENST00000442201 PGGT1BP53609 377 aa8□□□□□ -1.13
CCDC39-201ENST00000442201 ENPP2Q13822 863 aa8□□□□□ -1.13
CCDC39-201ENST00000442201 SPCS2Q15005 226 aa8□□□□□ -1.13
CCDC39-201ENST00000442201 CHRNA6Q15825 494 aa8□□□□□ -1.13
CCDC39-201ENST00000442201 FAM46CQ5VWP2 391 aa8□□□□□ -1.13
CCDC39-201ENST00000442201 LYPLAL1Q5VWZ2 237 aa8□□□□□ -1.13
CCDC39-201ENST00000442201 TXNDC11Q6PKC3 985 aa8□□□□□ -1.13
CCDC39-201ENST00000442201 DPPA4Q7L190 304 aa8□□□□□ -1.13
CCDC39-201ENST00000442201 SERPINA9Q86WD7 417 aa8□□□□□ -1.13
CCDC39-201ENST00000442201 MMAAQ8IVH4 418 aaKnown RBP8□□□□□ -1.13
CCDC39-201ENST00000442201 KCTD4Q8WVF5 259 aa8□□□□□ -1.13
CCDC39-201ENST00000442201 ZNF75CPQ92670 426 aaPredicted RBP8□□□□□ -1.13
CCDC39-201ENST00000442201 DNASE1L2Q92874 299 aa8□□□□□ -1.13
CCDC39-201ENST00000442201 HLA-CQ95604 372 aa8□□□□□ -1.13
CCDC39-201ENST00000442201 KLHL29Q96CT2 875 aa8□□□□□ -1.13
CCDC39-201ENST00000442201 CDX2Q99626 313 aaPredicted RBP8□□□□□ -1.13
CCDC39-201ENST00000442201 NMRAL1Q9HBL8 299 aa8□□□□□ -1.13
CCDC39-201ENST00000442201 RAD18Q9NS91 495 aa8□□□□□ -1.13
CCDC39-201ENST00000442201 ABCF3Q9NUQ8 709 aa8□□□□□ -1.13
CCDC39-201ENST00000442201 SCHIP1Q9P0W5 487 aaPredicted RBP8□□□□□ -1.13
CCDC39-201ENST00000442201 CRLS1Q9UJA2 301 aa8□□□□□ -1.13
CCDC39-201ENST00000442201 MID2Q9UJV3 735 aa8□□□□□ -1.13
CCDC39-201ENST00000442201 DENND4AQ7Z401 1863 aa8□□□□□ -1.13
CCDC39-201ENST00000442201 GOLGA8CPA6NN73 597 aa8□□□□□ -1.13
CCDC39-201ENST00000442201 PRMT5O14744 637 aaPredicted RBP8□□□□□ -1.13
CCDC39-201ENST00000442201 GPR39O43194 453 aa8□□□□□ -1.13
CCDC39-201ENST00000442201 APOA4P06727 396 aa8□□□□□ -1.13
CCDC39-201ENST00000442201 ZNF7P17097 686 aaPredicted RBP8□□□□□ -1.13
CCDC39-201ENST00000442201 FDXRP22570 491 aa8□□□□□ -1.13
CCDC39-201ENST00000442201 TIE1P35590 1138 aa8□□□□□ -1.13
CCDC39-201ENST00000442201 MMP12P39900 470 aa8□□□□□ -1.13
CCDC39-201ENST00000442201 SUOXP51687 545 aa8□□□□□ -1.13
CCDC39-201ENST00000442201 CDKN2DP55273 166 aa8□□□□□ -1.13
CCDC39-201ENST00000442201 TUBA4AP68366 448 aa8□□□□□ -1.13
CCDC39-201ENST00000442201 ELP6Q0PNE2 266 aa8□□□□□ -1.13
CCDC39-201ENST00000442201 FAM83EQ2M2I3 478 aa8□□□□□ -1.13
CCDC39-201ENST00000442201 WASHC2DQ5SRD0 308 aa8□□□□□ -1.13
CCDC39-201ENST00000442201 NUDCD3Q8IVD9 361 aa8□□□□□ -1.13
CCDC39-201ENST00000442201 CENPLQ8N0S6 344 aaPredicted RBP8□□□□□ -1.13
CCDC39-201ENST00000442201 LSMEM2Q8N112 164 aa8□□□□□ -1.13
CCDC39-201ENST00000442201 ARRDC3Q96B67 414 aa8□□□□□ -1.13
CCDC39-201ENST00000442201 CENPOQ9BU64 300 aa8□□□□□ -1.13
CCDC39-201ENST00000442201 C1QTNF1Q9BXJ1 281 aa8□□□□□ -1.13
CCDC39-201ENST00000442201 MANSC1Q9H8J5 431 aa8□□□□□ -1.13
CCDC39-201ENST00000442201 NMRK1Q9NWW6 199 aa8□□□□□ -1.13
CCDC39-201ENST00000442201 TAS2R13Q9NYV9 303 aa8□□□□□ -1.13
CCDC39-201ENST00000442201 RUVBL2Q9Y230 463 aaKnown RBP8□□□□□ -1.13
CCDC39-201ENST00000442201 COL4A3Q01955 1670 aa8□□□□□ -1.13
CCDC39-201ENST00000442201 TRBV5-4A0A0C4DH59 114 aa8□□□□□ -1.13
CCDC39-201ENST00000442201 E9PBE3 544 aa8□□□□□ -1.13
CCDC39-201ENST00000442201 K7EQS6 105 aa8□□□□□ -1.13
CCDC39-201ENST00000442201 MATN2O00339 956 aa8□□□□□ -1.13
CCDC39-201ENST00000442201 NVLO15381 856 aaKnown RBP8□□□□□ -1.13
CCDC39-201ENST00000442201 SYNCRIPO60506 623 aaKnown RBP8□□□□□ -1.13
CCDC39-201ENST00000442201 RNASEH1O60930 286 aaKnown RBP8□□□□□ -1.13
CCDC39-201ENST00000442201 DNAJC6O75061 913 aa8□□□□□ -1.13
CCDC39-201ENST00000442201 RHOBTB1O94844 696 aa8□□□□□ -1.13
CCDC39-201ENST00000442201 KLHL2O95198 593 aa8□□□□□ -1.13
CCDC39-201ENST00000442201 LMNAP02545 664 aaKnown RBP8□□□□□ -1.13
CCDC39-201ENST00000442201 ESR1P03372 595 aa8□□□□□ -1.13
CCDC39-201ENST00000442201 BPGMP07738 259 aa8□□□□□ -1.13
CCDC39-201ENST00000442201 FOSL2P15408 326 aa8□□□□□ -1.13
CCDC39-201ENST00000442201 UGT1A6P19224 532 aa8□□□□□ -1.13
CCDC39-201ENST00000442201 UGT1A1P22309 533 aa8□□□□□ -1.13
CCDC39-201ENST00000442201 UGT1A4P22310 534 aa8□□□□□ -1.13
CCDC39-201ENST00000442201 UGT1A3P35503 534 aa8□□□□□ -1.13
CCDC39-201ENST00000442201 UGT1A5P35504 534 aa8□□□□□ -1.13
CCDC39-201ENST00000442201 SLC26A3P40879 764 aa8□□□□□ -1.13
CCDC39-201ENST00000442201 KIR2DL1P43626 348 aaPredicted RBP8□□□□□ -1.13
CCDC39-201ENST00000442201 SEC13P55735 322 aa8□□□□□ -1.13
CCDC39-201ENST00000442201 TUBA1BP68363 451 aa8□□□□□ -1.13
CCDC39-201ENST00000442201 PDAP1Q13442 181 aaKnown RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms