RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 ZNF189O75820 626 aaPredicted RBP18.61■□□□□ 0.57
HMGB3P22-201ENST00000442010 STK10O94804 968 aaKnown RBP18.61■□□□□ 0.57
HMGB3P22-201ENST00000442010 LIPCP11150 499 aa18.61■□□□□ 0.57
HMGB3P22-201ENST00000442010 LPOP22079 712 aaPredicted RBP18.61■□□□□ 0.57
HMGB3P22-201ENST00000442010 CTSCP53634 463 aa18.61■□□□□ 0.57
HMGB3P22-201ENST00000442010 ITGA9Q13797 1035 aa18.61■□□□□ 0.57
HMGB3P22-201ENST00000442010 PRPSAP1Q14558 356 aa18.61■□□□□ 0.57
HMGB3P22-201ENST00000442010 LDLRAP1Q5SW96 308 aa18.61■□□□□ 0.57
HMGB3P22-201ENST00000442010 GPRC6AQ5T6X5 926 aa18.61■□□□□ 0.57
HMGB3P22-201ENST00000442010 AGAP9Q5VTM2 703 aa18.61■□□□□ 0.57
HMGB3P22-201ENST00000442010 KCTD11Q693B1 232 aa18.61■□□□□ 0.57
HMGB3P22-201ENST00000442010 INO80CQ6PI98 192 aaPredicted RBP18.61■□□□□ 0.57
HMGB3P22-201ENST00000442010 ARHGAP22Q7Z5H3 698 aa18.61■□□□□ 0.57
HMGB3P22-201ENST00000442010 RNF10Q8N5U6 811 aaKnown RBP18.61■□□□□ 0.57
HMGB3P22-201ENST00000442010 AGBL5Q8NDL9 886 aa18.61■□□□□ 0.57
HMGB3P22-201ENST00000442010 GDAP1Q8TB36 358 aa18.61■□□□□ 0.57
HMGB3P22-201ENST00000442010 PMEPA1Q969W9 287 aa18.61■□□□□ 0.57
HMGB3P22-201ENST00000442010 AHCYL2Q96HN2 611 aaKnown RBP18.61■□□□□ 0.57
HMGB3P22-201ENST00000442010 TBC1D10AQ9BXI6 508 aa18.61■□□□□ 0.57
HMGB3P22-201ENST00000442010 AKAP7Q9P0M2 348 aaPredicted RBP18.61■□□□□ 0.57
HMGB3P22-201ENST00000442010 R3HDM2Q9Y2K5 976 aaKnown RBP18.61■□□□□ 0.57
HMGB3P22-201ENST00000442010 PCDHGA3Q9Y5H0 932 aa18.61■□□□□ 0.57
HMGB3P22-201ENST00000442010 GOLGA6L9A6NEM1 432 aa18.6■□□□□ 0.57
HMGB3P22-201ENST00000442010 AGAP14A8MT82 685 aa18.6■□□□□ 0.57
HMGB3P22-201ENST00000442010 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.6■□□□□ 0.57
HMGB3P22-201ENST00000442010 CD82P27701 267 aa18.6■□□□□ 0.57
HMGB3P22-201ENST00000442010 GDF10P55107 478 aa18.6■□□□□ 0.57
HMGB3P22-201ENST00000442010 XIAPP98170 497 aa18.6■□□□□ 0.57
HMGB3P22-201ENST00000442010 DMPKQ09013 629 aa18.6■□□□□ 0.57
HMGB3P22-201ENST00000442010 GTF2H3Q13889 308 aa18.6■□□□□ 0.57
HMGB3P22-201ENST00000442010 TMEM26Q6ZUK4 368 aa18.6■□□□□ 0.57
HMGB3P22-201ENST00000442010 ZFAND4Q86XD8 727 aa18.6■□□□□ 0.57
HMGB3P22-201ENST00000442010 TRAPPC5Q8IUR0 188 aa18.6■□□□□ 0.57
HMGB3P22-201ENST00000442010 BMPERQ8N8U9 685 aa18.6■□□□□ 0.57
HMGB3P22-201ENST00000442010 LSM14AQ8ND56 463 aaKnown RBP18.6■□□□□ 0.57
HMGB3P22-201ENST00000442010 OR4K2Q8NGD2 314 aa18.6■□□□□ 0.57
HMGB3P22-201ENST00000442010 ZNF398Q8TD17 642 aa18.6■□□□□ 0.57
HMGB3P22-201ENST00000442010 PPP1R2P1Q96PQ5 205 aa18.6■□□□□ 0.57
HMGB3P22-201ENST00000442010 TAAR9Q96RI9 348 aa18.6■□□□□ 0.57
HMGB3P22-201ENST00000442010 CCNL2Q96S94 520 aaPredicted RBP18.6■□□□□ 0.57
HMGB3P22-201ENST00000442010 C19orf43Q9BQ61 176 aa18.6■□□□□ 0.57
HMGB3P22-201ENST00000442010 TBL1YQ9BQ87 522 aa18.6■□□□□ 0.57
HMGB3P22-201ENST00000442010 EPB41L1Q9H4G0 881 aa18.6■□□□□ 0.57
HMGB3P22-201ENST00000442010 OCIAD1Q9NX40 245 aa18.6■□□□□ 0.57
HMGB3P22-201ENST00000442010 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.6■□□□□ 0.57
HMGB3P22-201ENST00000442010 OGFRQ9NZT2 677 aa18.6■□□□□ 0.57
HMGB3P22-201ENST00000442010 WDR37Q9Y2I8 494 aa18.6■□□□□ 0.57
HMGB3P22-201ENST00000442010 COL6A6A6NMZ7 2263 aa18.6■□□□□ 0.57
HMGB3P22-201ENST00000442010 C2orf81A6NN90 581 aa18.59■□□□□ 0.57
HMGB3P22-201ENST00000442010 KCNJ13O60928 360 aa18.59■□□□□ 0.57
HMGB3P22-201ENST00000442010 PRAMEF1O95521 474 aa18.59■□□□□ 0.57
HMGB3P22-201ENST00000442010 METTL18O95568 372 aa18.59■□□□□ 0.57
HMGB3P22-201ENST00000442010 IDSP22304 550 aa18.59■□□□□ 0.57
HMGB3P22-201ENST00000442010 RPL10P27635 214 aaKnown RBP18.59■□□□□ 0.57
HMGB3P22-201ENST00000442010 ZNF140P52738 457 aaPredicted RBP18.59■□□□□ 0.57
HMGB3P22-201ENST00000442010 SRSF6Q13247 344 aaKnown RBP18.59■□□□□ 0.57
HMGB3P22-201ENST00000442010 SPARCL1Q14515 664 aa18.59■□□□□ 0.57
HMGB3P22-201ENST00000442010 CLCA4Q14CN2 919 aa18.59■□□□□ 0.57
HMGB3P22-201ENST00000442010 SEPT7Q16181 437 aaKnown RBP18.59■□□□□ 0.57
HMGB3P22-201ENST00000442010 PARP6Q2NL67 630 aa18.59■□□□□ 0.57
HMGB3P22-201ENST00000442010 FAM71DQ8N9W8 422 aa18.59■□□□□ 0.57
HMGB3P22-201ENST00000442010 NCSTNQ92542 709 aa18.59■□□□□ 0.57
HMGB3P22-201ENST00000442010 ZCCHC2Q9C0B9 1178 aaKnown RBP18.59■□□□□ 0.57
HMGB3P22-201ENST00000442010 FKBPLQ9UIM3 349 aa18.59■□□□□ 0.57
HMGB3P22-201ENST00000442010 DNMT3AQ9Y6K1 912 aaPredicted RBP18.59■□□□□ 0.57
HMGB3P22-201ENST00000442010 SLC30A1Q9Y6M5 507 aa18.59■□□□□ 0.57
HMGB3P22-201ENST00000442010 MN1Q10571 1320 aaPredicted RBP18.58■□□□□ 0.57
HMGB3P22-201ENST00000442010 PDZK1P1A8MUH7 402 aa18.58■□□□□ 0.56
HMGB3P22-201ENST00000442010 B4E171 279 aa18.58■□□□□ 0.56
HMGB3P22-201ENST00000442010 TK2O00142 265 aa18.58■□□□□ 0.56
HMGB3P22-201ENST00000442010 LDB2O43679 373 aa18.58■□□□□ 0.56
HMGB3P22-201ENST00000442010 SRP72O76094 671 aaKnown RBP18.58■□□□□ 0.56
HMGB3P22-201ENST00000442010 VIPP01282 170 aa18.58■□□□□ 0.56
HMGB3P22-201ENST00000442010 CSTF2P33240 577 aaKnown RBP eCLIP18.58■□□□□ 0.56
HMGB3P22-201ENST00000442010 TSPAN7P41732 249 aa18.58■□□□□ 0.56
HMGB3P22-201ENST00000442010 DRG2P55039 364 aaKnown RBP18.58■□□□□ 0.56
HMGB3P22-201ENST00000442010 RHDQ02161 417 aa18.58■□□□□ 0.56
HMGB3P22-201ENST00000442010 TMEM164Q5U3C3 297 aa18.58■□□□□ 0.56
HMGB3P22-201ENST00000442010 TMEM220Q6QAJ8 160 aa18.58■□□□□ 0.56
HMGB3P22-201ENST00000442010 XKR5Q6UX68 686 aa18.58■□□□□ 0.56
HMGB3P22-201ENST00000442010 CCDC81Q6ZN84 652 aa18.58■□□□□ 0.56
HMGB3P22-201ENST00000442010 AMZ2Q86W34 360 aa18.58■□□□□ 0.56
HMGB3P22-201ENST00000442010 OR13C4Q8NGS5 318 aa18.58■□□□□ 0.56
HMGB3P22-201ENST00000442010 TTC9Q92623 222 aa18.58■□□□□ 0.56
HMGB3P22-201ENST00000442010 TTC25Q96NG3 672 aa18.58■□□□□ 0.56
HMGB3P22-201ENST00000442010 TMEM121Q9BTD3 319 aa18.58■□□□□ 0.56
HMGB3P22-201ENST00000442010 DDA1Q9BW61 102 aa18.58■□□□□ 0.56
HMGB3P22-201ENST00000442010 SLC40A1Q9NP59 571 aa18.58■□□□□ 0.56
HMGB3P22-201ENST00000442010 POT1Q9NUX5 634 aa18.58■□□□□ 0.56
HMGB3P22-201ENST00000442010 FEZ2Q9UHY8 353 aaPredicted RBP18.58■□□□□ 0.56
HMGB3P22-201ENST00000442010 B3GALT1Q9Y5Z6 326 aa18.58■□□□□ 0.56
HMGB3P22-201ENST00000442010 OR2AG2A6NM03 316 aa18.57■□□□□ 0.56
HMGB3P22-201ENST00000442010 OR52A4PA6NMU1 304 aa18.57■□□□□ 0.56
HMGB3P22-201ENST00000442010 ERVH48-1M5A8F1 160 aa18.57■□□□□ 0.56
HMGB3P22-201ENST00000442010 SGTAO43765 313 aa18.57■□□□□ 0.56
HMGB3P22-201ENST00000442010 POP7O75817 140 aaKnown RBP18.57■□□□□ 0.56
HMGB3P22-201ENST00000442010 CRTAMO95727 393 aa18.57■□□□□ 0.56
HMGB3P22-201ENST00000442010 C9P02748 559 aa18.57■□□□□ 0.56
HMGB3P22-201ENST00000442010 VCLP18206 1134 aa18.57■□□□□ 0.56
HMGB3P22-201ENST00000442010 GSDMDP57764 484 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms