RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 ZCWPW2A0A1B0GU75 182 aa4.73□□□□□ -1.65
PFDN4-202ENST00000441080 A0A1B0GUV1 79 aa4.73□□□□□ -1.65
PFDN4-202ENST00000441080 J3QR06 171 aa4.73□□□□□ -1.65
PFDN4-202ENST00000441080 EIF3DO15371 548 aaKnown RBP eCLIP4.73□□□□□ -1.65
PFDN4-202ENST00000441080 DGKAP23743 735 aa4.73□□□□□ -1.65
PFDN4-202ENST00000441080 NR2F2P24468 414 aa4.73□□□□□ -1.65
PFDN4-202ENST00000441080 CD81P60033 236 aa4.73□□□□□ -1.65
PFDN4-202ENST00000441080 ERVFC1-1P60608 527 aa4.73□□□□□ -1.65
PFDN4-202ENST00000441080 TMF1P82094 1093 aa4.73□□□□□ -1.65
PFDN4-202ENST00000441080 RUNX1T1Q06455 604 aa4.73□□□□□ -1.65
PFDN4-202ENST00000441080 KRT33BQ14525 404 aa4.73□□□□□ -1.65
PFDN4-202ENST00000441080 PCLAFQ15004 111 aa4.73□□□□□ -1.65
PFDN4-202ENST00000441080 CFAP58Q5T655 872 aa4.73□□□□□ -1.65
PFDN4-202ENST00000441080 PLEKHM3Q6ZWE6 761 aa4.73□□□□□ -1.65
PFDN4-202ENST00000441080 Q75L30 129 aa4.73□□□□□ -1.65
PFDN4-202ENST00000441080 EXOC3L1Q86VI1 746 aa4.73□□□□□ -1.65
PFDN4-202ENST00000441080 GALNT13Q8IUC8 556 aa4.73□□□□□ -1.65
PFDN4-202ENST00000441080 LINC00346Q8IVM7 164 aa4.73□□□□□ -1.65
PFDN4-202ENST00000441080 MUC20Q8N307 709 aaPredicted RBP4.73□□□□□ -1.65
PFDN4-202ENST00000441080 C1orf52Q8N6N3 182 aaKnown RBP4.73□□□□□ -1.65
PFDN4-202ENST00000441080 RTN4RQ9BZR6 473 aa4.73□□□□□ -1.65
PFDN4-202ENST00000441080 PDE7BQ9NP56 450 aa4.73□□□□□ -1.65
PFDN4-202ENST00000441080 KLHL1Q9NR64 748 aa4.73□□□□□ -1.65
PFDN4-202ENST00000441080 TCP11L1Q9NUJ3 509 aa4.73□□□□□ -1.65
PFDN4-202ENST00000441080 GIMAP4Q9NUV9 329 aa4.73□□□□□ -1.65
PFDN4-202ENST00000441080 TERF2IPQ9NYB0 399 aa4.73□□□□□ -1.65
PFDN4-202ENST00000441080 PSD3Q9NYI0 1048 aa4.73□□□□□ -1.65
PFDN4-202ENST00000441080 TAS2R14Q9NYV8 317 aa4.73□□□□□ -1.65
PFDN4-202ENST00000441080 RCC2Q9P258 522 aaKnown RBP4.73□□□□□ -1.65
PFDN4-202ENST00000441080 ASPDHA6ND91 283 aa4.72□□□□□ -1.65
PFDN4-202ENST00000441080 NDUFS4O43181 175 aa4.72□□□□□ -1.65
PFDN4-202ENST00000441080 BUB3O43684 328 aa4.72□□□□□ -1.65
PFDN4-202ENST00000441080 BUD23O43709 281 aaKnown RBP4.72□□□□□ -1.65
PFDN4-202ENST00000441080 AVILO75366 819 aa4.72□□□□□ -1.65
PFDN4-202ENST00000441080 PGM3O95394 542 aa4.72□□□□□ -1.65
PFDN4-202ENST00000441080 PRLRP16471 622 aa4.72□□□□□ -1.65
PFDN4-202ENST00000441080 ITGB6P18564 788 aa4.72□□□□□ -1.65
PFDN4-202ENST00000441080 NMBRP28336 390 aa4.72□□□□□ -1.65
PFDN4-202ENST00000441080 NNMTP40261 264 aa4.72□□□□□ -1.65
PFDN4-202ENST00000441080 STAT2P52630 851 aa4.72□□□□□ -1.65
PFDN4-202ENST00000441080 ZNF132P52740 706 aa4.72□□□□□ -1.65
PFDN4-202ENST00000441080 RPL36AP83881 106 aaKnown RBP4.72□□□□□ -1.65
PFDN4-202ENST00000441080 POU3F1Q03052 451 aaPredicted RBP4.72□□□□□ -1.65
PFDN4-202ENST00000441080 CXCL9Q07325 125 aa4.72□□□□□ -1.65
PFDN4-202ENST00000441080 TROAPQ12815 778 aa4.72□□□□□ -1.65
PFDN4-202ENST00000441080 STXBP5Q5T5C0 1151 aa4.72□□□□□ -1.65
PFDN4-202ENST00000441080 FAM171BQ6P995 826 aa4.72□□□□□ -1.65
PFDN4-202ENST00000441080 ZNF534Q76KX8 674 aa4.72□□□□□ -1.65
PFDN4-202ENST00000441080 GALNT5Q7Z7M9 940 aa4.72□□□□□ -1.65
PFDN4-202ENST00000441080 SLC9B2Q86UD5 537 aa4.72□□□□□ -1.65
PFDN4-202ENST00000441080 OR52I2Q8NH67 350 aa4.72□□□□□ -1.65
PFDN4-202ENST00000441080 PRPF31Q8WWY3 499 aaKnown RBP4.72□□□□□ -1.65
PFDN4-202ENST00000441080 SLC22A18Q96BI1 424 aa4.72□□□□□ -1.65
PFDN4-202ENST00000441080 FKRPQ9H9S5 495 aa4.72□□□□□ -1.65
PFDN4-202ENST00000441080 PLSCR4Q9NRQ2 329 aa4.72□□□□□ -1.65
PFDN4-202ENST00000441080 ABCF3Q9NUQ8 709 aa4.72□□□□□ -1.65
PFDN4-202ENST00000441080 MARCH4Q9P2E8 410 aaPredicted RBP4.72□□□□□ -1.65
PFDN4-202ENST00000441080 AMACRQ9UHK6 382 aa4.72□□□□□ -1.65
PFDN4-202ENST00000441080 PROCRQ9UNN8 238 aa4.72□□□□□ -1.65
PFDN4-202ENST00000441080 RABGAP1Q9Y3P9 1069 aa4.72□□□□□ -1.65
PFDN4-202ENST00000441080 PRAG1Q86YV5 1406 aa4.72□□□□□ -1.65
PFDN4-202ENST00000441080 LOC100509620A0A075B734 347 aa4.71□□□□□ -1.66
PFDN4-202ENST00000441080 ANKRD66B4E2M5 251 aa4.71□□□□□ -1.66
PFDN4-202ENST00000441080 PLK4O00444 970 aa4.71□□□□□ -1.66
PFDN4-202ENST00000441080 ARSEP51690 589 aa4.71□□□□□ -1.66
PFDN4-202ENST00000441080 C15orf59Q2T9L4 293 aaPredicted RBP4.71□□□□□ -1.66
PFDN4-202ENST00000441080 FAM98BQ52LJ0 330 aaKnown RBP4.71□□□□□ -1.66
PFDN4-202ENST00000441080 RAB6CQ53S08 254 aa4.71□□□□□ -1.66
PFDN4-202ENST00000441080 KRT79Q5XKE5 535 aa4.71□□□□□ -1.66
PFDN4-202ENST00000441080 WBP2NLQ6ICG8 309 aa4.71□□□□□ -1.66
PFDN4-202ENST00000441080 INTS8Q75QN2 995 aaKnown RBP4.71□□□□□ -1.66
PFDN4-202ENST00000441080 DCP1BQ8IZD4 617 aaKnown RBP4.71□□□□□ -1.66
PFDN4-202ENST00000441080 SCML4Q8N228 414 aa4.71□□□□□ -1.66
PFDN4-202ENST00000441080 GBGT1Q8N5D6 347 aa4.71□□□□□ -1.66
PFDN4-202ENST00000441080 MCUQ8NE86 351 aa4.71□□□□□ -1.66
PFDN4-202ENST00000441080 APPL2Q8NEU8 664 aa4.71□□□□□ -1.66
PFDN4-202ENST00000441080 CD101Q93033 1021 aa4.71□□□□□ -1.66
PFDN4-202ENST00000441080 LINGO1Q96FE5 620 aa4.71□□□□□ -1.66
PFDN4-202ENST00000441080 PKP4Q99569 1192 aa4.71□□□□□ -1.66
PFDN4-202ENST00000441080 RAB6CQ9H0N0 254 aa4.71□□□□□ -1.66
PFDN4-202ENST00000441080 ZNF556Q9HAH1 456 aa4.71□□□□□ -1.66
PFDN4-202ENST00000441080 CHMP1AQ9HD42 196 aaPredicted RBP4.71□□□□□ -1.66
PFDN4-202ENST00000441080 WWOXQ9NZC7 414 aa4.71□□□□□ -1.66
PFDN4-202ENST00000441080 HACL1Q9UJ83 578 aa4.71□□□□□ -1.66
PFDN4-202ENST00000441080 ZNF148Q9UQR1 794 aa4.71□□□□□ -1.66
PFDN4-202ENST00000441080 A0A1W2PS18 150 aa4.7□□□□□ -1.66
PFDN4-202ENST00000441080 EME2A4GXA9 379 aaPredicted RBP4.7□□□□□ -1.66
PFDN4-202ENST00000441080 GLOD5A6NK44 160 aa4.7□□□□□ -1.66
PFDN4-202ENST00000441080 ADAMDEC1O15204 470 aa4.7□□□□□ -1.66
PFDN4-202ENST00000441080 VPREB1P12018 145 aa4.7□□□□□ -1.66
PFDN4-202ENST00000441080 AMD1P17707 334 aa4.7□□□□□ -1.66
PFDN4-202ENST00000441080 TRIM21P19474 475 aaKnown RBP4.7□□□□□ -1.66
PFDN4-202ENST00000441080 AHRP35869 848 aa4.7□□□□□ -1.66
PFDN4-202ENST00000441080 FMO5P49326 533 aa4.7□□□□□ -1.66
PFDN4-202ENST00000441080 HSD17B4P51659 736 aa4.7□□□□□ -1.66
PFDN4-202ENST00000441080 TERF1P54274 439 aa4.7□□□□□ -1.66
PFDN4-202ENST00000441080 SNRPEP62304 92 aaKnown RBP4.7□□□□□ -1.66
PFDN4-202ENST00000441080 PITX1P78337 314 aaPredicted RBP4.7□□□□□ -1.66
PFDN4-202ENST00000441080 KRTAP1-1Q07627 177 aa4.7□□□□□ -1.66
PFDN4-202ENST00000441080 GAGE2BQ13066 116 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms