RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 LPGAT1Q92604 370 aa14.02□□□□□ -0.16
LIMD1-202ENST00000440097 CNDP1Q96KN2 507 aa14.02□□□□□ -0.16
LIMD1-202ENST00000440097 GPR21Q99679 349 aa14.02□□□□□ -0.16
LIMD1-202ENST00000440097 PLGRKTQ9HBL7 147 aa14.02□□□□□ -0.16
LIMD1-202ENST00000440097 HACD3Q9P035 362 aa14.02□□□□□ -0.16
LIMD1-202ENST00000440097 BCAP29Q9UHQ4 241 aa14.02□□□□□ -0.16
LIMD1-202ENST00000440097 PAIP2BQ9ULR5 123 aaKnown RBP14.02□□□□□ -0.16
LIMD1-202ENST00000440097 ZNF232Q9UNY5 417 aa14.02□□□□□ -0.16
LIMD1-202ENST00000440097 GRID2O43424 1007 aa14.02□□□□□ -0.17
LIMD1-202ENST00000440097 BMP1P13497 986 aa14.02□□□□□ -0.17
LIMD1-202ENST00000440097 CD1DP15813 335 aa14.02□□□□□ -0.17
LIMD1-202ENST00000440097 TCN1P20061 433 aaPredicted RBP14.02□□□□□ -0.17
LIMD1-202ENST00000440097 CDH13P55290 713 aa14.02□□□□□ -0.17
LIMD1-202ENST00000440097 SEMG2Q02383 582 aa14.02□□□□□ -0.17
LIMD1-202ENST00000440097 METTL21CQ5VZV1 264 aa14.02□□□□□ -0.17
LIMD1-202ENST00000440097 TMEM198Q66K66 360 aa14.02□□□□□ -0.17
LIMD1-202ENST00000440097 FAM151BQ6UXP7 276 aa14.02□□□□□ -0.17
LIMD1-202ENST00000440097 AFAP1L2Q8N4X5 818 aa14.02□□□□□ -0.17
LIMD1-202ENST00000440097 EME1Q96AY2 570 aa14.02□□□□□ -0.17
LIMD1-202ENST00000440097 BIRC8Q96P09 236 aa14.02□□□□□ -0.17
LIMD1-202ENST00000440097 SEMA6AQ9H2E6 1030 aa14.02□□□□□ -0.17
LIMD1-202ENST00000440097 SYTL2Q9HCH5 934 aa14.02□□□□□ -0.17
LIMD1-202ENST00000440097 TLR9Q9NR96 1032 aa14.02□□□□□ -0.17
LIMD1-202ENST00000440097 VPS9D1Q9Y2B5 631 aa14.02□□□□□ -0.17
LIMD1-202ENST00000440097 KIAA1671Q9BY89 1806 aa14.01□□□□□ -0.17
LIMD1-202ENST00000440097 NCF1BA6NI72 391 aaPredicted RBP14.01□□□□□ -0.17
LIMD1-202ENST00000440097 NCF1CA8MVU1 366 aaPredicted RBP14.01□□□□□ -0.17
LIMD1-202ENST00000440097 SUPT3HB4E1H0 165 aa14.01□□□□□ -0.17
LIMD1-202ENST00000440097 UBXN8O00124 270 aa14.01□□□□□ -0.17
LIMD1-202ENST00000440097 NIPSNAP2O75323 286 aa14.01□□□□□ -0.17
LIMD1-202ENST00000440097 VPS26AO75436 327 aa14.01□□□□□ -0.17
LIMD1-202ENST00000440097 PGLSO95336 258 aa14.01□□□□□ -0.17
LIMD1-202ENST00000440097 IGSF6O95976 241 aa14.01□□□□□ -0.17
LIMD1-202ENST00000440097 NCF1P14598 390 aaPredicted RBP14.01□□□□□ -0.17
LIMD1-202ENST00000440097 ARSAP15289 507 aa14.01□□□□□ -0.17
LIMD1-202ENST00000440097 ME2P23368 584 aa14.01□□□□□ -0.17
LIMD1-202ENST00000440097 BMPR1AP36894 532 aa14.01□□□□□ -0.17
LIMD1-202ENST00000440097 SLC26A3P40879 764 aa14.01□□□□□ -0.17
LIMD1-202ENST00000440097 CTSOP43234 321 aaPredicted RBP14.01□□□□□ -0.17
LIMD1-202ENST00000440097 DNAJB13P59910 316 aa14.01□□□□□ -0.17
LIMD1-202ENST00000440097 RAD51Q06609 339 aa14.01□□□□□ -0.17
LIMD1-202ENST00000440097 RAB44Q7Z6P3 723 aaPredicted RBP14.01□□□□□ -0.17
LIMD1-202ENST00000440097 CPXM2Q8N436 756 aa14.01□□□□□ -0.17
LIMD1-202ENST00000440097 PTGR2Q8N8N7 351 aaPredicted RBP14.01□□□□□ -0.17
LIMD1-202ENST00000440097 FAM156AQ8NDB6 213 aa14.01□□□□□ -0.17
LIMD1-202ENST00000440097 DLG3Q92796 817 aa14.01□□□□□ -0.17
LIMD1-202ENST00000440097 TCF12Q99081 682 aa14.01□□□□□ -0.17
LIMD1-202ENST00000440097 OSBPL6Q9BZF3 934 aa14.01□□□□□ -0.17
LIMD1-202ENST00000440097 ATP13A3Q9H7F0 1226 aa14.01□□□□□ -0.17
LIMD1-202ENST00000440097 RNF112Q9ULX5 631 aa14.01□□□□□ -0.17
LIMD1-202ENST00000440097 BCAS2O75934 225 aaPredicted RBP14.01□□□□□ -0.17
LIMD1-202ENST00000440097 H6PDO95479 791 aa14.01□□□□□ -0.17
LIMD1-202ENST00000440097 FUT4P22083 530 aa14.01□□□□□ -0.17
LIMD1-202ENST00000440097 FBXO48Q5FWF7 155 aa14.01□□□□□ -0.17
LIMD1-202ENST00000440097 IL23RQ5VWK5 629 aa14.01□□□□□ -0.17
LIMD1-202ENST00000440097 DHRS4L2Q6PKH6 230 aa14.01□□□□□ -0.17
LIMD1-202ENST00000440097 SPRED2Q7Z698 418 aa14.01□□□□□ -0.17
LIMD1-202ENST00000440097 CUZD1Q86UP6 607 aa14.01□□□□□ -0.17
LIMD1-202ENST00000440097 TMEM25Q86YD3 366 aa14.01□□□□□ -0.17
LIMD1-202ENST00000440097 FAM217AQ8IXS0 508 aa14.01□□□□□ -0.17
LIMD1-202ENST00000440097 FIBINQ8TAL6 211 aa14.01□□□□□ -0.17
LIMD1-202ENST00000440097 BBS2Q9BXC9 721 aa14.01□□□□□ -0.17
LIMD1-202ENST00000440097 COQ10BQ9H8M1 238 aa14.01□□□□□ -0.17
LIMD1-202ENST00000440097 WDR41Q9HAD4 459 aa14.01□□□□□ -0.17
LIMD1-202ENST00000440097 ZFYVE1Q9HBF4 777 aa14.01□□□□□ -0.17
LIMD1-202ENST00000440097 TRMT6Q9UJA5 497 aaKnown RBP14.01□□□□□ -0.17
LIMD1-202ENST00000440097 MYOFQ9NZM1 2061 aa14.01□□□□□ -0.17
LIMD1-202ENST00000440097 H3BMM5 538 aa14□□□□□ -0.17
LIMD1-202ENST00000440097 GFRA2O00451 464 aa14□□□□□ -0.17
LIMD1-202ENST00000440097 SIX3O95343 332 aaPredicted RBP14□□□□□ -0.17
LIMD1-202ENST00000440097 HK2P52789 917 aa14□□□□□ -0.17
LIMD1-202ENST00000440097 NAA20P61599 178 aa14□□□□□ -0.17
LIMD1-202ENST00000440097 ILF2Q12905 390 aaKnown RBP14□□□□□ -0.17
LIMD1-202ENST00000440097 OR4D1Q15615 310 aa14□□□□□ -0.17
LIMD1-202ENST00000440097 ARHGAP15Q53QZ3 475 aa14□□□□□ -0.17
LIMD1-202ENST00000440097 AARS2Q5JTZ9 985 aaKnown RBP14□□□□□ -0.17
LIMD1-202ENST00000440097 MPP7Q5T2T1 576 aa14□□□□□ -0.17
LIMD1-202ENST00000440097 PGAM4Q8N0Y7 254 aa14□□□□□ -0.17
LIMD1-202ENST00000440097 TTC30BQ8N4P2 665 aa14□□□□□ -0.17
LIMD1-202ENST00000440097 KDM1BQ8NB78 822 aa14□□□□□ -0.17
LIMD1-202ENST00000440097 SIDT2Q8NBJ9 832 aaKnown RBP14□□□□□ -0.17
LIMD1-202ENST00000440097 RP9Q8TA86 221 aaKnown RBP14□□□□□ -0.17
LIMD1-202ENST00000440097 GIPC3Q8TF64 312 aa14□□□□□ -0.17
LIMD1-202ENST00000440097 TBRG4Q969Z0 631 aaKnown RBP eCLIP14□□□□□ -0.174e-12■■■■■ 96.3
LIMD1-202ENST00000440097 ATP6V1E2Q96A05 226 aa14□□□□□ -0.17
LIMD1-202ENST00000440097 C17orf80Q9BSJ5 609 aa14□□□□□ -0.17
LIMD1-202ENST00000440097 INIPQ9NRY2 104 aa14□□□□□ -0.17
LIMD1-202ENST00000440097 ZNHIT2Q9UHR6 403 aa14□□□□□ -0.17
LIMD1-202ENST00000440097 INTS6Q9UL03 887 aaKnown RBP14□□□□□ -0.17
LIMD1-202ENST00000440097 COMMD10Q9Y6G5 202 aa14□□□□□ -0.17
LIMD1-202ENST00000440097 OBSL1O75147 1896 aa14□□□□□ -0.17
LIMD1-202ENST00000440097 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14□□□□□ -0.17
LIMD1-202ENST00000440097 TRPC5OSA6NMA1 111 aa14□□□□□ -0.17
LIMD1-202ENST00000440097 H3BNH8 94 aa14□□□□□ -0.17
LIMD1-202ENST00000440097 BTN3A1O00481 513 aa14□□□□□ -0.17
LIMD1-202ENST00000440097 RHOP08100 348 aa14□□□□□ -0.17
LIMD1-202ENST00000440097 TFPTP0C1Z6 253 aa14□□□□□ -0.17
LIMD1-202ENST00000440097 PKMP14618 531 aaKnown RBP14□□□□□ -0.17
LIMD1-202ENST00000440097 SERPINA4P29622 427 aa14□□□□□ -0.17
LIMD1-202ENST00000440097 HLA-FP30511 346 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms