RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 CCDC187A0A096LP49 1063 aa23.25■■□□□ 1.31
VARS-217ENST00000440048 CCDC78A2IDD5 438 aa23.25■■□□□ 1.31
VARS-217ENST00000440048 PMS2P1A4D2B8 440 aa23.25■■□□□ 1.31
VARS-217ENST00000440048 USP27XA6NNY8 438 aa23.25■■□□□ 1.31
VARS-217ENST00000440048 TLX3O43711 291 aaPredicted RBP23.25■■□□□ 1.31
VARS-217ENST00000440048 POP7O75817 140 aaKnown RBP23.25■■□□□ 1.31
VARS-217ENST00000440048 CPNE6O95741 557 aa23.25■■□□□ 1.31
VARS-217ENST00000440048 GAS8O95995 478 aa23.25■■□□□ 1.31
VARS-217ENST00000440048 VCLP18206 1134 aa23.25■■□□□ 1.31
VARS-217ENST00000440048 PSMA3P25788 255 aa23.25■■□□□ 1.31
VARS-217ENST00000440048 MSNP26038 577 aaKnown RBP23.25■■□□□ 1.31
VARS-217ENST00000440048 ZFP36L1Q07352 338 aaKnown RBP23.25■■□□□ 1.31
VARS-217ENST00000440048 SEPT7Q16181 437 aaKnown RBP23.25■■□□□ 1.31
VARS-217ENST00000440048 NKAIN2Q5VXU1 208 aa23.25■■□□□ 1.31
VARS-217ENST00000440048 DET1Q7L5Y6 550 aa23.25■■□□□ 1.31
VARS-217ENST00000440048 PIM3Q86V86 326 aa23.25■■□□□ 1.31
VARS-217ENST00000440048 AMZ2Q86W34 360 aa23.25■■□□□ 1.31
VARS-217ENST00000440048 SLITRK4Q8IW52 837 aa23.25■■□□□ 1.31
VARS-217ENST00000440048 NXPE1Q8N323 547 aa23.25■■□□□ 1.31
VARS-217ENST00000440048 WDR36Q8NI36 951 aaKnown RBP23.25■■□□□ 1.31
VARS-217ENST00000440048 SGF29Q96ES7 293 aa23.25■■□□□ 1.31
VARS-217ENST00000440048 PRR11Q96HE9 360 aaPredicted RBP23.25■■□□□ 1.31
VARS-217ENST00000440048 OSBPL9Q96SU4 736 aa23.25■■□□□ 1.31
VARS-217ENST00000440048 SLC38A3Q99624 504 aa23.25■■□□□ 1.31
VARS-217ENST00000440048 NUDT22Q9BRQ3 303 aa23.25■■□□□ 1.31
VARS-217ENST00000440048 STRADBQ9C0K7 418 aa23.25■■□□□ 1.31
VARS-217ENST00000440048 STN1Q9H668 368 aaKnown RBP23.25■■□□□ 1.31
VARS-217ENST00000440048 CPNE7Q9UBL6 633 aa23.25■■□□□ 1.31
VARS-217ENST00000440048 DNMT3AQ9Y6K1 912 aaPredicted RBP23.25■■□□□ 1.31
VARS-217ENST00000440048 PDZK1P1A8MUH7 402 aa23.24■■□□□ 1.31
VARS-217ENST00000440048 KCNJ13O60928 360 aa23.24■■□□□ 1.31
VARS-217ENST00000440048 DXOO77932 396 aaKnown RBP23.24■■□□□ 1.31
VARS-217ENST00000440048 IDSP22304 550 aa23.24■■□□□ 1.31
VARS-217ENST00000440048 RPL10P27635 214 aaKnown RBP23.24■■□□□ 1.31
VARS-217ENST00000440048 CDKN1CP49918 316 aaPredicted RBP23.24■■□□□ 1.31
VARS-217ENST00000440048 UBE2IP63279 158 aaKnown RBP23.24■■□□□ 1.31
VARS-217ENST00000440048 CLPPQ16740 277 aaPredicted RBP23.24■■□□□ 1.31
VARS-217ENST00000440048 KCTD19Q17RG1 926 aaPredicted RBP23.24■■□□□ 1.31
VARS-217ENST00000440048 TBC1D25Q3MII6 688 aa23.24■■□□□ 1.31
VARS-217ENST00000440048 GPR33Q49SQ1 333 aa23.24■■□□□ 1.31
VARS-217ENST00000440048 ZRANB3Q5FWF4 1079 aa23.24■■□□□ 1.31
VARS-217ENST00000440048 FNBP1LQ5T0N5 605 aa23.24■■□□□ 1.31
VARS-217ENST00000440048 ABRAXAS1Q6UWZ7 409 aa23.24■■□□□ 1.31
VARS-217ENST00000440048 WASH2PQ6VEQ5 465 aa23.24■■□□□ 1.31
VARS-217ENST00000440048 LSMEM2Q8N112 164 aa23.24■■□□□ 1.31
VARS-217ENST00000440048 COG1Q8WTW3 980 aa23.24■■□□□ 1.31
VARS-217ENST00000440048 NAT14Q8WUY8 206 aa23.24■■□□□ 1.31
VARS-217ENST00000440048 SH3KBP1Q96B97 665 aa23.24■■□□□ 1.31
VARS-217ENST00000440048 CCDC97Q96F63 343 aaPredicted RBP23.24■■□□□ 1.31
VARS-217ENST00000440048 ZNF514Q96K75 400 aaPredicted RBP23.24■■□□□ 1.31
VARS-217ENST00000440048 AP1M1Q9BXS5 423 aa23.24■■□□□ 1.31
VARS-217ENST00000440048 SEMA6CQ9H3T2 930 aa23.24■■□□□ 1.31
VARS-217ENST00000440048 WASH6PQ9NQA3 447 aa23.24■■□□□ 1.31
VARS-217ENST00000440048 EIF2B3Q9NR50 452 aaKnown RBP23.24■■□□□ 1.31
VARS-217ENST00000440048 SMARCAL1Q9NZC9 954 aa23.24■■□□□ 1.31
VARS-217ENST00000440048 PCDHGA8Q9Y5G5 932 aa23.24■■□□□ 1.31
VARS-217ENST00000440048 ZFHX4Q86UP3 3567 aa23.23■■□□□ 1.31
VARS-217ENST00000440048 TRBV5-4A0A0C4DH59 114 aa23.23■■□□□ 1.31
VARS-217ENST00000440048 PRSS56P0CW18 603 aa23.23■■□□□ 1.31
VARS-217ENST00000440048 BRAFP15056 766 aa23.23■■□□□ 1.31
VARS-217ENST00000440048 XRCC1P18887 633 aaPredicted RBP23.23■■□□□ 1.31
VARS-217ENST00000440048 ARSDP51689 593 aa23.23■■□□□ 1.31
VARS-217ENST00000440048 DRG2P55039 364 aaKnown RBP23.23■■□□□ 1.31
VARS-217ENST00000440048 BASP1P80723 227 aaKnown RBP23.23■■□□□ 1.31
VARS-217ENST00000440048 DMPKQ09013 629 aa23.23■■□□□ 1.31
VARS-217ENST00000440048 SQSTM1Q13501 440 aa23.23■■□□□ 1.31
VARS-217ENST00000440048 SKIDA1Q1XH10 827 aa23.23■■□□□ 1.31
VARS-217ENST00000440048 AGAP9Q5VTM2 703 aa23.23■■□□□ 1.31
VARS-217ENST00000440048 TTC27Q6P3X3 843 aa23.23■■□□□ 1.31
VARS-217ENST00000440048 FOXR1Q6PIV2 292 aa23.23■■□□□ 1.31
VARS-217ENST00000440048 ZNF574Q6ZN55 896 aaPredicted RBP23.23■■□□□ 1.31
VARS-217ENST00000440048 BEND7Q8N7W2 519 aaPredicted RBP23.23■■□□□ 1.31
VARS-217ENST00000440048 AVL9Q8NBF6 648 aa23.23■■□□□ 1.31
VARS-217ENST00000440048 MAGOHBQ96A72 148 aaKnown RBP23.23■■□□□ 1.31
VARS-217ENST00000440048 DCUN1D1Q96GG9 259 aa23.23■■□□□ 1.31
VARS-217ENST00000440048 NAP1L3Q99457 506 aaPredicted RBP23.23■■□□□ 1.31
VARS-217ENST00000440048 COPS8Q99627 209 aa23.23■■□□□ 1.31
VARS-217ENST00000440048 ASCL3Q9NQ33 180 aa23.23■■□□□ 1.31
VARS-217ENST00000440048 ZNF624Q9P2J8 865 aaPredicted RBP23.23■■□□□ 1.31
VARS-217ENST00000440048 PIKFYVEQ9Y2I7 2098 aa23.22■■□□□ 1.31
VARS-217ENST00000440048 HEATR9A2RTY3 570 aa23.22■■□□□ 1.31
VARS-217ENST00000440048 PGRMC1O00264 195 aaKnown RBP23.22■■□□□ 1.31
VARS-217ENST00000440048 SGTAO43765 313 aa23.22■■□□□ 1.31
VARS-217ENST00000440048 RALBP11234 206 aa23.22■■□□□ 1.31
VARS-217ENST00000440048 HOXB3P14651 431 aaPredicted RBP23.22■■□□□ 1.31
VARS-217ENST00000440048 PBLDP30039 288 aaPredicted RBP23.22■■□□□ 1.31
VARS-217ENST00000440048 CSF2RBP32927 897 aa23.22■■□□□ 1.31
VARS-217ENST00000440048 SLC19A1P41440 591 aa23.22■■□□□ 1.31
VARS-217ENST00000440048 GPLD1P80108 840 aa23.22■■□□□ 1.31
VARS-217ENST00000440048 CFHR1Q03591 330 aa23.22■■□□□ 1.31
VARS-217ENST00000440048 LAMB3Q13751 1172 aa23.22■■□□□ 1.31
VARS-217ENST00000440048 BCL7AQ4VC05 210 aa23.22■■□□□ 1.31
VARS-217ENST00000440048 PHF19Q5T6S3 580 aa23.22■■□□□ 1.31
VARS-217ENST00000440048 IGF2-ASQ6U949 168 aa23.22■■□□□ 1.31
VARS-217ENST00000440048 FAM83HQ6ZRV2 1179 aaPredicted RBP23.22■■□□□ 1.31
VARS-217ENST00000440048 RAB11FIP2Q7L804 512 aa23.22■■□□□ 1.31
VARS-217ENST00000440048 SERPINA9Q86WD7 417 aa23.22■■□□□ 1.31
VARS-217ENST00000440048 HEXDCQ8WVB3 486 aa23.22■■□□□ 1.31
VARS-217ENST00000440048 FGF11Q92914 225 aa23.22■■□□□ 1.31
VARS-217ENST00000440048 ZNF578Q96N58 590 aaPredicted RBP23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms