RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 FASLGP48023 281 aa11.63□□□□□ -0.55
HSPG2-206ENST00000439717 CDKN1CP49918 316 aaPredicted RBP11.63□□□□□ -0.55
HSPG2-206ENST00000439717 CRADDP78560 199 aa11.63□□□□□ -0.55
HSPG2-206ENST00000439717 B4GALNT1Q00973 533 aa11.63□□□□□ -0.55
HSPG2-206ENST00000439717 INSM1Q01101 510 aaPredicted RBP11.63□□□□□ -0.55
HSPG2-206ENST00000439717 CKAP4Q07065 602 aaKnown RBP11.63□□□□□ -0.55
HSPG2-206ENST00000439717 KIR2DS5Q14953 304 aa11.63□□□□□ -0.55
HSPG2-206ENST00000439717 MORF4L2Q15014 288 aa11.63□□□□□ -0.55
HSPG2-206ENST00000439717 DBN1Q16643 649 aa11.63□□□□□ -0.55
HSPG2-206ENST00000439717 PLA2G4EQ3MJ16 856 aa11.63□□□□□ -0.55
HSPG2-206ENST00000439717 FASTKD1Q53R41 847 aaKnown RBP11.63□□□□□ -0.55
HSPG2-206ENST00000439717 AARS2Q5JTZ9 985 aaKnown RBP11.63□□□□□ -0.55
HSPG2-206ENST00000439717 PERM1Q5SV97 790 aa11.63□□□□□ -0.55
HSPG2-206ENST00000439717 FNBP1LQ5T0N5 605 aa11.63□□□□□ -0.55
HSPG2-206ENST00000439717 AGAP9Q5VTM2 703 aa11.63□□□□□ -0.55
HSPG2-206ENST00000439717 IZUMO3Q5VZ72 239 aa11.63□□□□□ -0.55
HSPG2-206ENST00000439717 IYDQ6PHW0 289 aa11.63□□□□□ -0.55
HSPG2-206ENST00000439717 WASH2PQ6VEQ5 465 aa11.63□□□□□ -0.55
HSPG2-206ENST00000439717 PACS1Q6VY07 963 aa11.63□□□□□ -0.55
HSPG2-206ENST00000439717 MAATS1Q7Z4T9 603 aa11.63□□□□□ -0.55
HSPG2-206ENST00000439717 PIANPQ8IYJ0 282 aa11.63□□□□□ -0.55
HSPG2-206ENST00000439717 SFRP1Q8N474 314 aa11.63□□□□□ -0.55
HSPG2-206ENST00000439717 AVL9Q8NBF6 648 aa11.63□□□□□ -0.55
HSPG2-206ENST00000439717 OR6P1Q8NGX9 317 aa11.63□□□□□ -0.55
HSPG2-206ENST00000439717 CCDC74AQ96AQ1 378 aa11.63□□□□□ -0.55
HSPG2-206ENST00000439717 SGF29Q96ES7 293 aa11.63□□□□□ -0.55
HSPG2-206ENST00000439717 KRT12Q99456 494 aa11.63□□□□□ -0.55
HSPG2-206ENST00000439717 CCDC3Q9BQI4 270 aa11.63□□□□□ -0.55
HSPG2-206ENST00000439717 SCNM1Q9BWG6 230 aa11.63□□□□□ -0.55
HSPG2-206ENST00000439717 ABCG4Q9H172 646 aa11.63□□□□□ -0.55
HSPG2-206ENST00000439717 OSGEPL1Q9H4B0 414 aa11.63□□□□□ -0.55
HSPG2-206ENST00000439717 WASH6PQ9NQA3 447 aa11.63□□□□□ -0.55
HSPG2-206ENST00000439717 SAMD15Q9P1V8 674 aa11.63□□□□□ -0.55
HSPG2-206ENST00000439717 LRIT1Q9P2V4 623 aa11.63□□□□□ -0.55
HSPG2-206ENST00000439717 CDC23Q9UJX2 597 aa11.63□□□□□ -0.55
HSPG2-206ENST00000439717 ANAPC5Q9UJX4 755 aa11.63□□□□□ -0.55
HSPG2-206ENST00000439717 RNF215Q9Y6U7 377 aa11.63□□□□□ -0.55
HSPG2-206ENST00000439717 PLXNB3Q9ULL4 1909 aa11.62□□□□□ -0.55
HSPG2-206ENST00000439717 C17orf113A0A1B0GUU1 675 aa11.62□□□□□ -0.55
HSPG2-206ENST00000439717 FAM237BA0A1B0GVD1 139 aa11.62□□□□□ -0.55
HSPG2-206ENST00000439717 FAM187AA6NFU0 413 aa11.62□□□□□ -0.55
HSPG2-206ENST00000439717 MGAT4DA6NG13 374 aa11.62□□□□□ -0.55
HSPG2-206ENST00000439717 RHPN2P1A8MT19 583 aa11.62□□□□□ -0.55
HSPG2-206ENST00000439717 F8W8V4 182 aa11.62□□□□□ -0.55
HSPG2-206ENST00000439717 GOLGA8MH3BSY2 632 aa11.62□□□□□ -0.55
HSPG2-206ENST00000439717 QSOX1O00391 747 aa11.62□□□□□ -0.55
HSPG2-206ENST00000439717 TTI1O43156 1089 aa11.62□□□□□ -0.55
HSPG2-206ENST00000439717 SGTAO43765 313 aa11.62□□□□□ -0.55
HSPG2-206ENST00000439717 SNX2O60749 519 aa11.62□□□□□ -0.55
HSPG2-206ENST00000439717 TCEA3O75764 348 aa11.62□□□□□ -0.55
HSPG2-206ENST00000439717 EML2O95834 649 aa11.62□□□□□ -0.55
HSPG2-206ENST00000439717 TOP3BO95985 862 aaKnown RBP11.62□□□□□ -0.55
HSPG2-206ENST00000439717 GSTM1P09488 218 aa11.62□□□□□ -0.55
HSPG2-206ENST00000439717 PRSS56P0CW18 603 aa11.62□□□□□ -0.55
HSPG2-206ENST00000439717 PAMP19021 973 aa11.62□□□□□ -0.55
HSPG2-206ENST00000439717 NMBRP28336 390 aa11.62□□□□□ -0.55
HSPG2-206ENST00000439717 GPR3P46089 330 aa11.62□□□□□ -0.55
HSPG2-206ENST00000439717 PRLHRP49683 370 aa11.62□□□□□ -0.55
HSPG2-206ENST00000439717 MAZP56270 477 aaKnown RBP11.62□□□□□ -0.55
HSPG2-206ENST00000439717 GSTM4Q03013 218 aa11.62□□□□□ -0.55
HSPG2-206ENST00000439717 BIRC2Q13490 618 aa11.62□□□□□ -0.55
HSPG2-206ENST00000439717 TUBB2AQ13885 445 aa11.62□□□□□ -0.55
HSPG2-206ENST00000439717 NR1D2Q14995 579 aa11.62□□□□□ -0.55
HSPG2-206ENST00000439717 HES3Q5TGS1 186 aa11.62□□□□□ -0.55
HSPG2-206ENST00000439717 CDCP2Q5VXM1 449 aa11.62□□□□□ -0.55
HSPG2-206ENST00000439717 CASC4Q6P4E1 433 aa11.62□□□□□ -0.55
HSPG2-206ENST00000439717 ABRAXAS1Q6UWZ7 409 aa11.62□□□□□ -0.55
HSPG2-206ENST00000439717 DET1Q7L5Y6 550 aa11.62□□□□□ -0.55
HSPG2-206ENST00000439717 ZNF438Q7Z4V0 828 aa11.62□□□□□ -0.55
HSPG2-206ENST00000439717 SLC9B2Q86UD5 537 aa11.62□□□□□ -0.55
HSPG2-206ENST00000439717 SFTPA2Q8IWL1 248 aa11.62□□□□□ -0.55
HSPG2-206ENST00000439717 MPP5Q8N3R9 675 aa11.62□□□□□ -0.55
HSPG2-206ENST00000439717 OR2L2Q8NH16 312 aa11.62□□□□□ -0.55
HSPG2-206ENST00000439717 SLC37A2Q8TED4 501 aa11.62□□□□□ -0.55
HSPG2-206ENST00000439717 TUBB2BQ9BVA1 445 aa11.62□□□□□ -0.55
HSPG2-206ENST00000439717 STN1Q9H668 368 aaKnown RBP11.62□□□□□ -0.55
HSPG2-206ENST00000439717 VPS37BQ9H9H4 285 aa11.62□□□□□ -0.55
HSPG2-206ENST00000439717 CATSPERZQ9NTU4 200 aa11.62□□□□□ -0.55
HSPG2-206ENST00000439717 KLK13Q9UKR3 277 aa11.62□□□□□ -0.55
HSPG2-206ENST00000439717 CLCA2Q9UQC9 943 aa11.62□□□□□ -0.55
HSPG2-206ENST00000439717 DNAJC16Q9Y2G8 782 aa11.62□□□□□ -0.55
HSPG2-206ENST00000439717 MSRB2Q9Y3D2 182 aa11.62□□□□□ -0.55
HSPG2-206ENST00000439717 NTN3O00634 580 aaPredicted RBP11.61□□□□□ -0.55
HSPG2-206ENST00000439717 CD3EAPO15446 510 aaKnown RBP11.61□□□□□ -0.55
HSPG2-206ENST00000439717 URI1O94763 535 aaPredicted RBP11.61□□□□□ -0.55
HSPG2-206ENST00000439717 MT-CO3P00414 261 aa11.61□□□□□ -0.55
HSPG2-206ENST00000439717 JUPP14923 745 aa11.61□□□□□ -0.55
HSPG2-206ENST00000439717 XRCC1P18887 633 aaPredicted RBP11.61□□□□□ -0.55
HSPG2-206ENST00000439717 TTPAP49638 278 aa11.61□□□□□ -0.55
HSPG2-206ENST00000439717 C2orf54Q08AI8 447 aa11.61□□□□□ -0.55
HSPG2-206ENST00000439717 WHAMMP3Q1A5X7 153 aa11.61□□□□□ -0.55
HSPG2-206ENST00000439717 DNAJC21Q5F1R6 531 aaKnown RBP11.61□□□□□ -0.55
HSPG2-206ENST00000439717 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.61□□□□□ -0.55
HSPG2-206ENST00000439717 METRNLQ641Q3 311 aa11.61□□□□□ -0.55
HSPG2-206ENST00000439717 KIAA0930Q6ICG6 404 aaPredicted RBP11.61□□□□□ -0.55
HSPG2-206ENST00000439717 HIBCHQ6NVY1 386 aaPredicted RBP11.61□□□□□ -0.55
HSPG2-206ENST00000439717 CCNI2Q6ZMN8 369 aaPredicted RBP11.61□□□□□ -0.55
HSPG2-206ENST00000439717 TMEM135Q86UB9 458 aa11.61□□□□□ -0.55
HSPG2-206ENST00000439717 CCNJLQ8IV13 435 aa11.61□□□□□ -0.55
HSPG2-206ENST00000439717 BEND7Q8N7W2 519 aaPredicted RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms