RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 EPSTI1Q96J88 318 aa10.8□□□□□ -0.68
RTN4-211ENST00000438462 C17orf62Q9BQA9 187 aa10.8□□□□□ -0.68
RTN4-211ENST00000438462 TLR10Q9BXR5 811 aa10.8□□□□□ -0.68
RTN4-211ENST00000438462 FANCEQ9HB96 536 aa10.8□□□□□ -0.68
RTN4-211ENST00000438462 ST7Q9NRC1 585 aa10.8□□□□□ -0.68
RTN4-211ENST00000438462 GPATCH2LQ9NWQ4 482 aa10.8□□□□□ -0.68
RTN4-211ENST00000438462 NDOR1Q9UHB4 597 aa10.8□□□□□ -0.68
RTN4-211ENST00000438462 CDC42EP3Q9UKI2 254 aa10.8□□□□□ -0.68
RTN4-211ENST00000438462 NPIPA1Q9UND3 350 aa10.8□□□□□ -0.68
RTN4-211ENST00000438462 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.8□□□□□ -0.683e-9■■■■■ 96.9
RTN4-211ENST00000438462 IGLV3-10A0A075B6K4 115 aa10.79□□□□□ -0.68
RTN4-211ENST00000438462 CNOT4O95628 575 aaKnown RBP10.79□□□□□ -0.68
RTN4-211ENST00000438462 MLYCDO95822 493 aa10.79□□□□□ -0.68
RTN4-211ENST00000438462 XRCC1P18887 633 aaPredicted RBP10.79□□□□□ -0.68
RTN4-211ENST00000438462 MX2P20592 715 aa10.79□□□□□ -0.68
RTN4-211ENST00000438462 SLC19A1P41440 591 aa10.79□□□□□ -0.68
RTN4-211ENST00000438462 OLIG2Q13516 323 aa10.79□□□□□ -0.68
RTN4-211ENST00000438462 GPR18Q14330 331 aa10.79□□□□□ -0.68
RTN4-211ENST00000438462 TAF5Q15542 800 aa10.79□□□□□ -0.68
RTN4-211ENST00000438462 CATSPEREQ5SY80 951 aa10.79□□□□□ -0.68
RTN4-211ENST00000438462 UBAP2Q5T6F2 1119 aaKnown RBP10.79□□□□□ -0.68
RTN4-211ENST00000438462 DENND2CQ68D51 928 aa10.79□□□□□ -0.68
RTN4-211ENST00000438462 USP45Q70EL2 814 aa10.79□□□□□ -0.68
RTN4-211ENST00000438462 OR1L3Q8NH93 324 aa10.79□□□□□ -0.68
RTN4-211ENST00000438462 RND1Q92730 232 aa10.79□□□□□ -0.68
RTN4-211ENST00000438462 HAS2Q92819 552 aa10.79□□□□□ -0.68
RTN4-211ENST00000438462 SEC16BQ96JE7 1060 aa10.79□□□□□ -0.68
RTN4-211ENST00000438462 CUEDC2Q9H467 287 aa10.79□□□□□ -0.68
RTN4-211ENST00000438462 SOHLH2Q9NX45 425 aa10.79□□□□□ -0.68
RTN4-211ENST00000438462 ANKRD12Q6UB98 2062 aa10.78□□□□□ -0.68
RTN4-211ENST00000438462 UBA6A0AVT1 1052 aaPredicted RBP10.78□□□□□ -0.68
RTN4-211ENST00000438462 MTA2O94776 668 aa10.78□□□□□ -0.68
RTN4-211ENST00000438462 PRAMEF1O95521 474 aa10.78□□□□□ -0.68
RTN4-211ENST00000438462 TEAD1P28347 426 aa10.78□□□□□ -0.68
RTN4-211ENST00000438462 ETV3P41162 512 aa10.78□□□□□ -0.68
RTN4-211ENST00000438462 ALDH6A1Q02252 535 aaKnown RBP10.78□□□□□ -0.68
RTN4-211ENST00000438462 PPP3CAQ08209 521 aa10.78□□□□□ -0.68
RTN4-211ENST00000438462 FLYWCH1Q4VC44 716 aa10.78□□□□□ -0.68
RTN4-211ENST00000438462 DNTTIP2Q5QJE6 756 aaKnown RBP10.78□□□□□ -0.68
RTN4-211ENST00000438462 TMTC4Q5T4D3 741 aa10.78□□□□□ -0.68
RTN4-211ENST00000438462 ARTNQ5T4W7 220 aa10.78□□□□□ -0.68
RTN4-211ENST00000438462 RRAGBQ5VZM2 374 aa10.78□□□□□ -0.68
RTN4-211ENST00000438462 TIGD7Q6NT04 549 aaPredicted RBP10.78□□□□□ -0.68
RTN4-211ENST00000438462 CD163Q86VB7 1156 aa10.78□□□□□ -0.68
RTN4-211ENST00000438462 CAMK1DQ8IU85 385 aa10.78□□□□□ -0.68
RTN4-211ENST00000438462 LZTR1Q8N653 840 aa10.78□□□□□ -0.68
RTN4-211ENST00000438462 SUN3Q8TAQ9 357 aa10.78□□□□□ -0.68
RTN4-211ENST00000438462 SEMA4DQ92854 862 aa10.78□□□□□ -0.68
RTN4-211ENST00000438462 DTD2Q96FN9 168 aa10.78□□□□□ -0.68
RTN4-211ENST00000438462 PTGFRNQ9P2B2 879 aa10.78□□□□□ -0.68
RTN4-211ENST00000438462 ZNF624Q9P2J8 865 aaPredicted RBP10.78□□□□□ -0.68
RTN4-211ENST00000438462 CGNQ9P2M7 1197 aaKnown RBP10.78□□□□□ -0.68
RTN4-211ENST00000438462 CDC23Q9UJX2 597 aa10.78□□□□□ -0.68
RTN4-211ENST00000438462 CDYLQ9Y232 598 aa10.78□□□□□ -0.68
RTN4-211ENST00000438462 ARID1AO14497 2285 aa10.78□□□□□ -0.68
RTN4-211ENST00000438462 SLC9B1P1A6NJY1 282 aa10.77□□□□□ -0.69
RTN4-211ENST00000438462 TMEM150CB9EJG8 249 aa10.77□□□□□ -0.69
RTN4-211ENST00000438462 MAPK13O15264 365 aa10.77□□□□□ -0.69
RTN4-211ENST00000438462 SRGAP2O75044 1071 aa10.77□□□□□ -0.69
RTN4-211ENST00000438462 ZBTB11O95625 1053 aaPredicted RBP10.77□□□□□ -0.69
RTN4-211ENST00000438462 SOD1P00441 154 aa10.77□□□□□ -0.69
RTN4-211ENST00000438462 CBSLP0DN79 551 aa10.77□□□□□ -0.69
RTN4-211ENST00000438462 MMP11P24347 488 aa10.77□□□□□ -0.69
RTN4-211ENST00000438462 CBSP35520 551 aa10.77□□□□□ -0.69
RTN4-211ENST00000438462 SOX11P35716 441 aa10.77□□□□□ -0.69
RTN4-211ENST00000438462 ETFBP38117 255 aa10.77□□□□□ -0.69
RTN4-211ENST00000438462 GPR1P46091 355 aa10.77□□□□□ -0.69
RTN4-211ENST00000438462 ADCY2Q08462 1091 aa10.77□□□□□ -0.69
RTN4-211ENST00000438462 CNGA3Q16281 694 aa10.77□□□□□ -0.69
RTN4-211ENST00000438462 TUBB8Q3ZCM7 444 aa10.77□□□□□ -0.69
RTN4-211ENST00000438462 TMEM211Q6ICI0 200 aa10.77□□□□□ -0.69
RTN4-211ENST00000438462 FGD2Q7Z6J4 655 aa10.77□□□□□ -0.69
RTN4-211ENST00000438462 PAQR7Q86WK9 346 aa10.77□□□□□ -0.69
RTN4-211ENST00000438462 PHYKPLQ8IUZ5 450 aa10.77□□□□□ -0.69
RTN4-211ENST00000438462 DEFB106AQ8N104 65 aa10.77□□□□□ -0.69
RTN4-211ENST00000438462 GHDCQ8N2G8 530 aa10.77□□□□□ -0.69
RTN4-211ENST00000438462 RPRMLQ8N4K4 120 aa10.77□□□□□ -0.69
RTN4-211ENST00000438462 SGMS2Q8NHU3 365 aa10.77□□□□□ -0.69
RTN4-211ENST00000438462 PERPQ96FX8 193 aa10.77□□□□□ -0.69
RTN4-211ENST00000438462 ZNF641Q96N77 438 aaPredicted RBP10.77□□□□□ -0.69
RTN4-211ENST00000438462 ZSWIM1Q9BR11 485 aa10.77□□□□□ -0.69
RTN4-211ENST00000438462 TRIM51Q9BSJ1 452 aa10.77□□□□□ -0.69
RTN4-211ENST00000438462 OSGEPL1Q9H4B0 414 aa10.77□□□□□ -0.69
RTN4-211ENST00000438462 YAE1D1Q9NRH1 226 aa10.77□□□□□ -0.69
RTN4-211ENST00000438462 LHX3Q9UBR4 397 aa10.77□□□□□ -0.69
RTN4-211ENST00000438462 CCDC39Q9UFE4 941 aa10.77□□□□□ -0.69
RTN4-211ENST00000438462 HPCAL4Q9UM19 191 aa10.77□□□□□ -0.69
RTN4-211ENST00000438462 MTMR6Q9Y217 621 aa10.77□□□□□ -0.69
RTN4-211ENST00000438462 SIK3Q9Y2K2 1263 aa10.77□□□□□ -0.69
RTN4-211ENST00000438462 ASB1Q9Y576 335 aa10.77□□□□□ -0.69
RTN4-211ENST00000438462 ZNF749O43361 778 aa10.76□□□□□ -0.69
RTN4-211ENST00000438462 ASNA1O43681 348 aa10.76□□□□□ -0.69
RTN4-211ENST00000438462 BUB1O43683 1085 aa10.76□□□□□ -0.69
RTN4-211ENST00000438462 ASMTLO95671 621 aa10.76□□□□□ -0.69
RTN4-211ENST00000438462 BRD2P25440 801 aaKnown RBP10.76□□□□□ -0.69
RTN4-211ENST00000438462 RPL34P49207 117 aaKnown RBP10.76□□□□□ -0.69
RTN4-211ENST00000438462 GRM3Q14832 879 aa10.76□□□□□ -0.69
RTN4-211ENST00000438462 AGAP9Q5VTM2 703 aa10.76□□□□□ -0.69
RTN4-211ENST00000438462 C1orf189Q5VU69 101 aa10.76□□□□□ -0.69
RTN4-211ENST00000438462 KIRREL2Q6UWL6 708 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms