RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 SEMA3CQ99985 751 aa3.57□□□□□ -1.84
TRAPPC13-204ENST00000438419 NEURL2Q9BR09 285 aa3.57□□□□□ -1.84
TRAPPC13-204ENST00000438419 SYT17Q9BSW7 474 aa3.57□□□□□ -1.84
TRAPPC13-204ENST00000438419 APOL6Q9BWW8 343 aa3.57□□□□□ -1.84
TRAPPC13-204ENST00000438419 KRTAP2-2Q9BYT5 123 aa3.57□□□□□ -1.84
TRAPPC13-204ENST00000438419 KLHL4Q9C0H6 718 aa3.57□□□□□ -1.84
TRAPPC13-204ENST00000438419 HRH4Q9H3N8 390 aa3.57□□□□□ -1.84
TRAPPC13-204ENST00000438419 EVA1AQ9H8M9 152 aa3.57□□□□□ -1.84
TRAPPC13-204ENST00000438419 FKRPQ9H9S5 495 aa3.57□□□□□ -1.84
TRAPPC13-204ENST00000438419 KLHL1Q9NR64 748 aa3.57□□□□□ -1.84
TRAPPC13-204ENST00000438419 TRMT1Q9NXH9 659 aaKnown RBP3.57□□□□□ -1.84
TRAPPC13-204ENST00000438419 ARHGEF38Q9NXL2 777 aa3.57□□□□□ -1.84
TRAPPC13-204ENST00000438419 CPSF2Q9P2I0 782 aaKnown RBP3.57□□□□□ -1.84
TRAPPC13-204ENST00000438419 NFKBIL1Q9UBC1 381 aaPredicted RBP3.57□□□□□ -1.84
TRAPPC13-204ENST00000438419 DLGAP4Q9Y2H0 992 aa3.57□□□□□ -1.84
TRAPPC13-204ENST00000438419 PCDHAC2Q9Y5I4 1007 aa3.57□□□□□ -1.84
TRAPPC13-204ENST00000438419 FAM169AQ9Y6X4 670 aa3.57□□□□□ -1.84
TRAPPC13-204ENST00000438419 PASKQ96RG2 1323 aa3.56□□□□□ -1.84
TRAPPC13-204ENST00000438419 A0A1W2PP11 408 aa3.56□□□□□ -1.84
TRAPPC13-204ENST00000438419 OR2A25A4D2G3 310 aa3.56□□□□□ -1.84
TRAPPC13-204ENST00000438419 TMEM8BA6NDV4 472 aa3.56□□□□□ -1.84
TRAPPC13-204ENST00000438419 LRRC72A6NJI9 287 aa3.56□□□□□ -1.84
TRAPPC13-204ENST00000438419 PRAC2D3DTV9 90 aa3.56□□□□□ -1.84
TRAPPC13-204ENST00000438419 PRR23D1E9PI22 279 aaPredicted RBP3.56□□□□□ -1.84
TRAPPC13-204ENST00000438419 BUD23O43709 281 aaKnown RBP3.56□□□□□ -1.84
TRAPPC13-204ENST00000438419 MITFO75030 526 aaPredicted RBP3.56□□□□□ -1.84
TRAPPC13-204ENST00000438419 WDR1O75083 606 aa3.56□□□□□ -1.84
TRAPPC13-204ENST00000438419 KCNK5O95279 499 aa3.56□□□□□ -1.84
TRAPPC13-204ENST00000438419 FAM106CPP0CH98 169 aa3.56□□□□□ -1.84
TRAPPC13-204ENST00000438419 PRR23D2P0DMB1 279 aaPredicted RBP3.56□□□□□ -1.84
TRAPPC13-204ENST00000438419 CDH1P12830 882 aa3.56□□□□□ -1.84
TRAPPC13-204ENST00000438419 HLA-DOBP13765 273 aa3.56□□□□□ -1.84
TRAPPC13-204ENST00000438419 KCNA5P22460 613 aa3.56□□□□□ -1.84
TRAPPC13-204ENST00000438419 DGKAP23743 735 aa3.56□□□□□ -1.84
TRAPPC13-204ENST00000438419 LMAN1P49257 510 aa3.56□□□□□ -1.84
TRAPPC13-204ENST00000438419 HSD17B4P51659 736 aa3.56□□□□□ -1.84
TRAPPC13-204ENST00000438419 CTSCP53634 463 aa3.56□□□□□ -1.84
TRAPPC13-204ENST00000438419 ERVFC1-1P60608 527 aa3.56□□□□□ -1.84
TRAPPC13-204ENST00000438419 PLIN5Q00G26 463 aa3.56□□□□□ -1.84
TRAPPC13-204ENST00000438419 GTF2H2Q13888 395 aa3.56□□□□□ -1.84
TRAPPC13-204ENST00000438419 KCNC3Q14003 757 aa3.56□□□□□ -1.84
TRAPPC13-204ENST00000438419 IGSF11Q5DX21 431 aa3.56□□□□□ -1.84
TRAPPC13-204ENST00000438419 NAA16Q6N069 864 aaPredicted RBP3.56□□□□□ -1.84
TRAPPC13-204ENST00000438419 GTF2H2CQ6P1K8 395 aa3.56□□□□□ -1.84
TRAPPC13-204ENST00000438419 ASB18Q6ZVZ8 466 aa3.56□□□□□ -1.84
TRAPPC13-204ENST00000438419 PRPF39Q86UA1 669 aaKnown RBP3.56□□□□□ -1.84
TRAPPC13-204ENST00000438419 SCYL3Q8IZE3 742 aa3.56□□□□□ -1.84
TRAPPC13-204ENST00000438419 MUC20Q8N307 709 aaPredicted RBP3.56□□□□□ -1.84
TRAPPC13-204ENST00000438419 RASGEF1CQ8N431 466 aa3.56□□□□□ -1.84
TRAPPC13-204ENST00000438419 RFLNBQ8N5W9 214 aa3.56□□□□□ -1.84
TRAPPC13-204ENST00000438419 IL17RCQ8NAC3 791 aa3.56□□□□□ -1.84
TRAPPC13-204ENST00000438419 KCTD6Q8NC69 237 aa3.56□□□□□ -1.84
TRAPPC13-204ENST00000438419 BBS10Q8TAM1 723 aa3.56□□□□□ -1.84
TRAPPC13-204ENST00000438419 GSDMBQ8TAX9 411 aa3.56□□□□□ -1.84
TRAPPC13-204ENST00000438419 TMEM255BQ8WV15 326 aa3.56□□□□□ -1.84
TRAPPC13-204ENST00000438419 SLC44A1Q8WWI5 657 aa3.56□□□□□ -1.84
TRAPPC13-204ENST00000438419 LMLNQ96KR4 655 aa3.56□□□□□ -1.84
TRAPPC13-204ENST00000438419 TTC14Q96N46 770 aa3.56□□□□□ -1.84
TRAPPC13-204ENST00000438419 ABHD1Q96SE0 405 aa3.56□□□□□ -1.84
TRAPPC13-204ENST00000438419 PAFAH2Q99487 392 aa3.56□□□□□ -1.84
TRAPPC13-204ENST00000438419 ZNF556Q9HAH1 456 aa3.56□□□□□ -1.84
TRAPPC13-204ENST00000438419 GIMAP4Q9NUV9 329 aa3.56□□□□□ -1.84
TRAPPC13-204ENST00000438419 SEC63Q9UGP8 760 aaKnown RBP3.56□□□□□ -1.84
TRAPPC13-204ENST00000438419 OR2W1Q9Y3N9 320 aa3.56□□□□□ -1.84
TRAPPC13-204ENST00000438419 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.56□□□□□ -1.84
TRAPPC13-204ENST00000438419 DOCK7Q96N67 2140 aa3.55□□□□□ -1.84
TRAPPC13-204ENST00000438419 A0A1W2PS18 150 aa3.55□□□□□ -1.84
TRAPPC13-204ENST00000438419 ASPDHA6ND91 283 aa3.55□□□□□ -1.84
TRAPPC13-204ENST00000438419 OR5K3A6NET4 321 aa3.55□□□□□ -1.84
TRAPPC13-204ENST00000438419 TSPY2A6NKD2 308 aa3.55□□□□□ -1.84
TRAPPC13-204ENST00000438419 ANKRD66B4E2M5 251 aa3.55□□□□□ -1.84
TRAPPC13-204ENST00000438419 ZNHIT1O43257 154 aa3.55□□□□□ -1.84
TRAPPC13-204ENST00000438419 BUB3O43684 328 aa3.55□□□□□ -1.84
TRAPPC13-204ENST00000438419 KRT36O76013 467 aa3.55□□□□□ -1.84
TRAPPC13-204ENST00000438419 GH2P01242 217 aa3.55□□□□□ -1.84
TRAPPC13-204ENST00000438419 TSPY3P0CV98 308 aa3.55□□□□□ -1.84
TRAPPC13-204ENST00000438419 TSPY8P0CW00 308 aa3.55□□□□□ -1.84
TRAPPC13-204ENST00000438419 MMP9P14780 707 aa3.55□□□□□ -1.84
TRAPPC13-204ENST00000438419 ZNF23P17027 643 aa3.55□□□□□ -1.84
TRAPPC13-204ENST00000438419 IL11P20809 199 aa3.55□□□□□ -1.84
TRAPPC13-204ENST00000438419 AMPHP49418 695 aa3.55□□□□□ -1.84
TRAPPC13-204ENST00000438419 STAT2P52630 851 aa3.55□□□□□ -1.84
TRAPPC13-204ENST00000438419 TSPY1Q01534 308 aa3.55□□□□□ -1.84
TRAPPC13-204ENST00000438419 PCLAFQ15004 111 aa3.55□□□□□ -1.84
TRAPPC13-204ENST00000438419 CCDC96Q2M329 555 aa3.55□□□□□ -1.84
TRAPPC13-204ENST00000438419 GARNL3Q5VVW2 1013 aa3.55□□□□□ -1.84
TRAPPC13-204ENST00000438419 ZDHHC20Q5W0Z9 365 aa3.55□□□□□ -1.84
TRAPPC13-204ENST00000438419 PLEKHM3Q6ZWE6 761 aa3.55□□□□□ -1.84
TRAPPC13-204ENST00000438419 AACSQ86V21 672 aa3.55□□□□□ -1.84
TRAPPC13-204ENST00000438419 DNAAF5Q86Y56 855 aa3.55□□□□□ -1.84
TRAPPC13-204ENST00000438419 SLC5A8Q8N695 610 aa3.55□□□□□ -1.84
TRAPPC13-204ENST00000438419 AVL9Q8NBF6 648 aa3.55□□□□□ -1.84
TRAPPC13-204ENST00000438419 POC1AQ8NBT0 407 aa3.55□□□□□ -1.84
TRAPPC13-204ENST00000438419 PRPF31Q8WWY3 499 aaKnown RBP3.55□□□□□ -1.84
TRAPPC13-204ENST00000438419 RADILQ96JH8 1075 aa3.55□□□□□ -1.84
TRAPPC13-204ENST00000438419 GCNAQ96QF7 691 aa3.55□□□□□ -1.84
TRAPPC13-204ENST00000438419 AP1M1Q9BXS5 423 aa3.55□□□□□ -1.84
TRAPPC13-204ENST00000438419 CSTL1Q9H114 145 aa3.55□□□□□ -1.84
TRAPPC13-204ENST00000438419 RAD21L1Q9H4I0 556 aa3.55□□□□□ -1.84
TRAPPC13-204ENST00000438419 DNAJC18Q9H819 358 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms