RNA–Protein interactions for RNA: ENST00000437995.1

SURF1-202, Transcript of SURF1, cytochrome c oxidase assembly factor, humanhuman

TSL 5

Gene SURF1, Length 813 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF1-202ENST00000437995 DCUN1D1Q96GG9 259 aa19.19■□□□□ 0.66
SURF1-202ENST00000437995 MS4A14Q96JA4 679 aa19.19■□□□□ 0.66
SURF1-202ENST00000437995 NAP1L3Q99457 506 aaPredicted RBP19.19■□□□□ 0.66
SURF1-202ENST00000437995 FAM96AQ9H5X1 160 aa19.19■□□□□ 0.66
SURF1-202ENST00000437995 RDH14Q9HBH5 336 aa19.19■□□□□ 0.66
SURF1-202ENST00000437995 CASS4Q9NQ75 786 aa19.19■□□□□ 0.66
SURF1-202ENST00000437995 WASH6PQ9NQA3 447 aa19.19■□□□□ 0.66
SURF1-202ENST00000437995 EIF2B3Q9NR50 452 aaKnown RBP19.19■□□□□ 0.66
SURF1-202ENST00000437995 SCHIP1Q9P0W5 487 aaPredicted RBP19.19■□□□□ 0.66
SURF1-202ENST00000437995 PCDHGA8Q9Y5G5 932 aa19.19■□□□□ 0.66
SURF1-202ENST00000437995 ACACAQ13085 2346 aa19.19■□□□□ 0.66
SURF1-202ENST00000437995 KMT2BQ9UMN6 2715 aaPredicted RBP19.18■□□□□ 0.66
SURF1-202ENST00000437995 CACNA1BQ00975 2339 aa19.18■□□□□ 0.66
SURF1-202ENST00000437995 HEATR9A2RTY3 570 aa19.18■□□□□ 0.66
SURF1-202ENST00000437995 TLX3O43711 291 aaPredicted RBP19.18■□□□□ 0.66
SURF1-202ENST00000437995 RALBP11234 206 aa19.18■□□□□ 0.66
SURF1-202ENST00000437995 PSMA3P25788 255 aa19.18■□□□□ 0.66
SURF1-202ENST00000437995 UBE2IP63279 158 aaKnown RBP19.18■□□□□ 0.66
SURF1-202ENST00000437995 BASP1P80723 227 aaKnown RBP19.18■□□□□ 0.66
SURF1-202ENST00000437995 DMPKQ09013 629 aa19.18■□□□□ 0.66
SURF1-202ENST00000437995 SQSTM1Q13501 440 aa19.18■□□□□ 0.66
SURF1-202ENST00000437995 LAMB3Q13751 1172 aa19.18■□□□□ 0.66
SURF1-202ENST00000437995 SEPT7Q16181 437 aaKnown RBP19.18■□□□□ 0.66
SURF1-202ENST00000437995 SKIDA1Q1XH10 827 aa19.18■□□□□ 0.66
SURF1-202ENST00000437995 CCDC38Q502W7 563 aa19.18■□□□□ 0.66
SURF1-202ENST00000437995 ZRANB3Q5FWF4 1079 aa19.18■□□□□ 0.66
SURF1-202ENST00000437995 FNBP1LQ5T0N5 605 aa19.18■□□□□ 0.66
SURF1-202ENST00000437995 AGAP9Q5VTM2 703 aa19.18■□□□□ 0.66
SURF1-202ENST00000437995 IGF2-ASQ6U949 168 aa19.18■□□□□ 0.66
SURF1-202ENST00000437995 ABRAXAS1Q6UWZ7 409 aa19.18■□□□□ 0.66
SURF1-202ENST00000437995 DET1Q7L5Y6 550 aa19.18■□□□□ 0.66
SURF1-202ENST00000437995 SNIP1Q8TAD8 396 aaKnown RBP19.18■□□□□ 0.66
SURF1-202ENST00000437995 SGF29Q96ES7 293 aa19.18■□□□□ 0.66
SURF1-202ENST00000437995 PRR11Q96HE9 360 aaPredicted RBP19.18■□□□□ 0.66
SURF1-202ENST00000437995 CDKN2AIPNLQ96HQ2 116 aa19.18■□□□□ 0.66
SURF1-202ENST00000437995 ZNF578Q96N58 590 aaPredicted RBP19.18■□□□□ 0.66
SURF1-202ENST00000437995 OSBPL9Q96SU4 736 aa19.18■□□□□ 0.66
SURF1-202ENST00000437995 COPS8Q99627 209 aa19.18■□□□□ 0.66
SURF1-202ENST00000437995 NUDT22Q9BRQ3 303 aa19.18■□□□□ 0.66
SURF1-202ENST00000437995 LDHAL6BQ9BYZ2 381 aaPredicted RBP19.18■□□□□ 0.66
SURF1-202ENST00000437995 KIF26BQ2KJY2 2108 aa19.18■□□□□ 0.66
SURF1-202ENST00000437995 FREM2Q5SZK8 3169 aa19.17■□□□□ 0.66
SURF1-202ENST00000437995 TRBV5-4A0A0C4DH59 114 aa19.17■□□□□ 0.66
SURF1-202ENST00000437995 CCDC78A2IDD5 438 aa19.17■□□□□ 0.66
SURF1-202ENST00000437995 PMS2P1A4D2B8 440 aa19.17■□□□□ 0.66
SURF1-202ENST00000437995 CFAP99D6REC4 459 aa19.17■□□□□ 0.66
SURF1-202ENST00000437995 PGRMC1O00264 195 aaKnown RBP19.17■□□□□ 0.66
SURF1-202ENST00000437995 BRAFP15056 766 aa19.17■□□□□ 0.66
SURF1-202ENST00000437995 XRCC1P18887 633 aaPredicted RBP19.17■□□□□ 0.66
SURF1-202ENST00000437995 RPL10P27635 214 aaKnown RBP19.17■□□□□ 0.66
SURF1-202ENST00000437995 RBMS1P29558 406 aaKnown RBP19.17■□□□□ 0.66
SURF1-202ENST00000437995 CACNG1Q06432 222 aa19.17■□□□□ 0.66
SURF1-202ENST00000437995 BCL7AQ4VC05 210 aa19.17■□□□□ 0.66
SURF1-202ENST00000437995 PHF19Q5T6S3 580 aa19.17■□□□□ 0.66
SURF1-202ENST00000437995 NKAIN2Q5VXU1 208 aa19.17■□□□□ 0.66
SURF1-202ENST00000437995 FOXR1Q6PIV2 292 aa19.17■□□□□ 0.66
SURF1-202ENST00000437995 RAB11FIP2Q7L804 512 aa19.17■□□□□ 0.66
SURF1-202ENST00000437995 TRIM48Q8IWZ4 208 aa19.17■□□□□ 0.66
SURF1-202ENST00000437995 OR10G6Q8NH81 332 aa19.17■□□□□ 0.66
SURF1-202ENST00000437995 HEXDCQ8WVB3 486 aa19.17■□□□□ 0.66
SURF1-202ENST00000437995 FGF11Q92914 225 aa19.17■□□□□ 0.66
SURF1-202ENST00000437995 MAGOHBQ96A72 148 aaKnown RBP19.17■□□□□ 0.66
SURF1-202ENST00000437995 AHCYL2Q96HN2 611 aaKnown RBP19.17■□□□□ 0.66
SURF1-202ENST00000437995 RANBP9Q96S59 729 aa19.17■□□□□ 0.66
SURF1-202ENST00000437995 DPYSL5Q9BPU6 564 aa19.17■□□□□ 0.66
SURF1-202ENST00000437995 AP1M1Q9BXS5 423 aa19.17■□□□□ 0.66
SURF1-202ENST00000437995 SEMA6CQ9H3T2 930 aa19.17■□□□□ 0.66
SURF1-202ENST00000437995 ASCL3Q9NQ33 180 aa19.17■□□□□ 0.66
SURF1-202ENST00000437995 ZDHHC3Q9NYG2 299 aa19.17■□□□□ 0.66
SURF1-202ENST00000437995 KLHL33A6NCF5 533 aa19.16■□□□□ 0.66
SURF1-202ENST00000437995 USP27XA6NNY8 438 aa19.16■□□□□ 0.66
SURF1-202ENST00000437995 PLD2O14939 933 aa19.16■□□□□ 0.66
SURF1-202ENST00000437995 DUX1O43812 170 aa19.16■□□□□ 0.66
SURF1-202ENST00000437995 VIPP01282 170 aa19.16■□□□□ 0.66
SURF1-202ENST00000437995 ADRA1DP25100 572 aa19.16■□□□□ 0.66
SURF1-202ENST00000437995 ACRV1P26436 265 aa19.16■□□□□ 0.66
SURF1-202ENST00000437995 PBLDP30039 288 aaPredicted RBP19.16■□□□□ 0.66
SURF1-202ENST00000437995 CSF2RBP32927 897 aa19.16■□□□□ 0.66
SURF1-202ENST00000437995 SLC19A1P41440 591 aa19.16■□□□□ 0.66
SURF1-202ENST00000437995 MLLT3P42568 568 aaPredicted RBP19.16■□□□□ 0.66
SURF1-202ENST00000437995 PPM1FP49593 454 aaPredicted RBP19.16■□□□□ 0.66
SURF1-202ENST00000437995 CDKN1CP49918 316 aaPredicted RBP19.16■□□□□ 0.66
SURF1-202ENST00000437995 ARSDP51689 593 aa19.16■□□□□ 0.66
SURF1-202ENST00000437995 EPHA4P54764 986 aa19.16■□□□□ 0.66
SURF1-202ENST00000437995 DRG2P55039 364 aaKnown RBP19.16■□□□□ 0.66
SURF1-202ENST00000437995 ERVPABLB-1P60509 514 aa19.16■□□□□ 0.66
SURF1-202ENST00000437995 ZNF574Q6ZN55 896 aaPredicted RBP19.16■□□□□ 0.66
SURF1-202ENST00000437995 MICALCLQ6ZW33 695 aa19.16■□□□□ 0.66
SURF1-202ENST00000437995 TAS2R42Q7RTR8 314 aa19.16■□□□□ 0.66
SURF1-202ENST00000437995 SERPINA9Q86WD7 417 aa19.16■□□□□ 0.66
SURF1-202ENST00000437995 FBXO39Q8N4B4 442 aa19.16■□□□□ 0.66
SURF1-202ENST00000437995 BEND7Q8N7W2 519 aaPredicted RBP19.16■□□□□ 0.66
SURF1-202ENST00000437995 ACTRT1Q8TDG2 376 aa19.16■□□□□ 0.66
SURF1-202ENST00000437995 COG1Q8WTW3 980 aa19.16■□□□□ 0.66
SURF1-202ENST00000437995 TMEM159Q96B96 161 aa19.16■□□□□ 0.66
SURF1-202ENST00000437995 CCDC97Q96F63 343 aaPredicted RBP19.16■□□□□ 0.66
SURF1-202ENST00000437995 SLC46A1Q96NT5 459 aa19.16■□□□□ 0.66
SURF1-202ENST00000437995 ZMYND15Q9H091 742 aa19.16■□□□□ 0.66
SURF1-202ENST00000437995 UCK1Q9HA47 277 aa19.16■□□□□ 0.66
SURF1-202ENST00000437995 THSD1Q9NS62 852 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms