RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 PDE9AO76083 593 aa2.91□□□□□ -1.94
HMGB1P31-201ENST00000437242 RTN3O95197 1032 aaPredicted RBP2.91□□□□□ -1.94
HMGB1P31-201ENST00000437242 DDX58O95786 925 aaKnown RBP2.91□□□□□ -1.94
HMGB1P31-201ENST00000437242 CD4P01730 458 aa2.91□□□□□ -1.94
HMGB1P31-201ENST00000437242 ATP1A3P13637 1013 aa2.91□□□□□ -1.94
HMGB1P31-201ENST00000437242 PSMA4P25789 261 aaKnown RBP2.91□□□□□ -1.94
HMGB1P31-201ENST00000437242 MAN1A1P33908 653 aa2.91□□□□□ -1.94
HMGB1P31-201ENST00000437242 ARCN1P48444 511 aaKnown RBP2.91□□□□□ -1.94
HMGB1P31-201ENST00000437242 MLLT10P55197 1068 aa2.91□□□□□ -1.94
HMGB1P31-201ENST00000437242 GEMIN4P57678 1058 aaKnown RBP2.91□□□□□ -1.94
HMGB1P31-201ENST00000437242 ACVR2BQ13705 512 aa2.91□□□□□ -1.94
HMGB1P31-201ENST00000437242 TXNDC8Q6A555 127 aa2.91□□□□□ -1.94
HMGB1P31-201ENST00000437242 QSOX2Q6ZRP7 698 aa2.91□□□□□ -1.94
HMGB1P31-201ENST00000437242 SH2D5Q6ZV89 423 aa2.91□□□□□ -1.94
HMGB1P31-201ENST00000437242 ANO5Q75V66 913 aa2.91□□□□□ -1.94
HMGB1P31-201ENST00000437242 MAP7D3Q8IWC1 876 aa2.91□□□□□ -1.94
HMGB1P31-201ENST00000437242 AMER3Q8N944 861 aa2.91□□□□□ -1.94
HMGB1P31-201ENST00000437242 RHBDF1Q96CC6 855 aa2.91□□□□□ -1.94
HMGB1P31-201ENST00000437242 MOCOSQ96EN8 888 aa2.91□□□□□ -1.94
HMGB1P31-201ENST00000437242 SENP5Q96HI0 755 aaPredicted RBP2.91□□□□□ -1.94
HMGB1P31-201ENST00000437242 SLC41A2Q96JW4 573 aa2.91□□□□□ -1.94
HMGB1P31-201ENST00000437242 TKTL2Q9H0I9 626 aa2.91□□□□□ -1.94
HMGB1P31-201ENST00000437242 PDCL3Q9H2J4 239 aa2.91□□□□□ -1.94
HMGB1P31-201ENST00000437242 SEBOXQ9HB31 216 aaPredicted RBP2.91□□□□□ -1.94
HMGB1P31-201ENST00000437242 IRAK4Q9NWZ3 460 aa2.91□□□□□ -1.94
HMGB1P31-201ENST00000437242 TAS2R10Q9NYW0 307 aa2.91□□□□□ -1.94
HMGB1P31-201ENST00000437242 KCND2Q9NZV8 630 aa2.91□□□□□ -1.94
HMGB1P31-201ENST00000437242 FBXL2Q9UKC9 423 aa2.91□□□□□ -1.94
HMGB1P31-201ENST00000437242 KIAA0586Q9BVV6 1533 aa2.91□□□□□ -1.94
HMGB1P31-201ENST00000437242 PTPRGP23470 1445 aa2.91□□□□□ -1.94
HMGB1P31-201ENST00000437242 WRNQ14191 1432 aaPredicted RBP eCLIP2.91□□□□□ -1.94
HMGB1P31-201ENST00000437242 IQGAP2Q13576 1575 aa2.91□□□□□ -1.94
HMGB1P31-201ENST00000437242 MED1Q15648 1581 aaPredicted RBP2.91□□□□□ -1.94
HMGB1P31-201ENST00000437242 KDM3AQ9Y4C1 1321 aa2.91□□□□□ -1.94
HMGB1P31-201ENST00000437242 UHRF1BP1LA0JNW5 1464 aa2.9□□□□□ -1.94
HMGB1P31-201ENST00000437242 WDR7Q9Y4E6 1490 aa2.9□□□□□ -1.94
HMGB1P31-201ENST00000437242 ARHGEF40Q8TER5 1519 aa2.9□□□□□ -1.95
HMGB1P31-201ENST00000437242 PREX1Q8TCU6 1659 aa2.9□□□□□ -1.95
HMGB1P31-201ENST00000437242 A0A1W2PPI3 338 aa2.9□□□□□ -1.95
HMGB1P31-201ENST00000437242 TTC36A6NLP5 189 aa2.9□□□□□ -1.95
HMGB1P31-201ENST00000437242 DUXAA6NLW8 204 aa2.9□□□□□ -1.95
HMGB1P31-201ENST00000437242 TAF4O00268 1085 aa2.9□□□□□ -1.95
HMGB1P31-201ENST00000437242 HS3ST1O14792 307 aa2.9□□□□□ -1.95
HMGB1P31-201ENST00000437242 TNFSF14O43557 240 aa2.9□□□□□ -1.95
HMGB1P31-201ENST00000437242 TBX18O95935 607 aa2.9□□□□□ -1.95
HMGB1P31-201ENST00000437242 TSHBP01222 138 aa2.9□□□□□ -1.95
HMGB1P31-201ENST00000437242 URODP06132 367 aa2.9□□□□□ -1.95
HMGB1P31-201ENST00000437242 COX7A2P14406 83 aa2.9□□□□□ -1.95
HMGB1P31-201ENST00000437242 GATA1P15976 413 aaPredicted RBP2.9□□□□□ -1.95
HMGB1P31-201ENST00000437242 TNFAIP3P21580 790 aa2.9□□□□□ -1.95
HMGB1P31-201ENST00000437242 CHMP24386 653 aa2.9□□□□□ -1.95
HMGB1P31-201ENST00000437242 NR2F2P24468 414 aa2.9□□□□□ -1.95
HMGB1P31-201ENST00000437242 EPHA8P29322 1005 aaPredicted RBP2.9□□□□□ -1.95
HMGB1P31-201ENST00000437242 ABCD1P33897 745 aa2.9□□□□□ -1.95
HMGB1P31-201ENST00000437242 GGT5P36269 586 aa2.9□□□□□ -1.95
HMGB1P31-201ENST00000437242 CASP2P42575 452 aa2.9□□□□□ -1.95
HMGB1P31-201ENST00000437242 CCR9P51686 369 aa2.9□□□□□ -1.95
HMGB1P31-201ENST00000437242 COG7P83436 770 aa2.9□□□□□ -1.95
HMGB1P31-201ENST00000437242 SIM2Q14190 667 aaPredicted RBP2.9□□□□□ -1.95
HMGB1P31-201ENST00000437242 KIR2DS3Q14952 304 aa2.9□□□□□ -1.95
HMGB1P31-201ENST00000437242 UGP2Q16851 508 aa2.9□□□□□ -1.95
HMGB1P31-201ENST00000437242 FFAR4Q5NUL3 377 aa2.9□□□□□ -1.95
HMGB1P31-201ENST00000437242 HYIQ5T013 277 aa2.9□□□□□ -1.95
HMGB1P31-201ENST00000437242 DCST1Q5T197 706 aa2.9□□□□□ -1.95
HMGB1P31-201ENST00000437242 SIGIRRQ6IA17 410 aa2.9□□□□□ -1.95
HMGB1P31-201ENST00000437242 SLC22A25Q6T423 547 aa2.9□□□□□ -1.95
HMGB1P31-201ENST00000437242 PQLC2Q6ZP29 291 aa2.9□□□□□ -1.95
HMGB1P31-201ENST00000437242 C1orf122Q6ZSJ8 110 aa2.9□□□□□ -1.95
HMGB1P31-201ENST00000437242 PIWIL4Q7Z3Z4 852 aaKnown RBP2.9□□□□□ -1.95
HMGB1P31-201ENST00000437242 BEST3Q8N1M1 668 aa2.9□□□□□ -1.95
HMGB1P31-201ENST00000437242 SAAL1Q96ER3 474 aa2.9□□□□□ -1.95
HMGB1P31-201ENST00000437242 ABHD8Q96I13 439 aa2.9□□□□□ -1.95
HMGB1P31-201ENST00000437242 NEUROD6Q96NK8 337 aa2.9□□□□□ -1.95
HMGB1P31-201ENST00000437242 NR1H4Q96RI1 486 aaPredicted RBP2.9□□□□□ -1.95
HMGB1P31-201ENST00000437242 IWS1Q96ST2 819 aa2.9□□□□□ -1.95
HMGB1P31-201ENST00000437242 LRMDAQ9H2I8 198 aa2.9□□□□□ -1.95
HMGB1P31-201ENST00000437242 OLA1Q9NTK5 396 aaKnown RBP2.9□□□□□ -1.95
HMGB1P31-201ENST00000437242 TCP11L1Q9NUJ3 509 aa2.9□□□□□ -1.95
HMGB1P31-201ENST00000437242 HSPB7Q9UBY9 170 aa2.9□□□□□ -1.95
HMGB1P31-201ENST00000437242 SARDHQ9UL12 918 aa2.9□□□□□ -1.95
HMGB1P31-201ENST00000437242 ZHX2Q9Y6X8 837 aa2.9□□□□□ -1.95
HMGB1P31-201ENST00000437242 UACAQ9BZF9 1416 aa2.9□□□□□ -1.95
HMGB1P31-201ENST00000437242 ABCA8O94911 1581 aa2.9□□□□□ -1.95
HMGB1P31-201ENST00000437242 TEX14Q8IWB6 1497 aa2.9□□□□□ -1.95
HMGB1P31-201ENST00000437242 MAGI3Q5TCQ9 1506 aa2.89□□□□□ -1.95
HMGB1P31-201ENST00000437242 A0A1W2PPH5 198 aa2.89□□□□□ -1.95
HMGB1P31-201ENST00000437242 A0A1W2PQM1 296 aa2.89□□□□□ -1.95
HMGB1P31-201ENST00000437242 OR5K3A6NET4 321 aa2.89□□□□□ -1.95
HMGB1P31-201ENST00000437242 VCYO14598 125 aa2.89□□□□□ -1.95
HMGB1P31-201ENST00000437242 SEC14L5O43304 696 aa2.89□□□□□ -1.95
HMGB1P31-201ENST00000437242 HSPA1AP0DMV8 641 aaKnown RBP2.89□□□□□ -1.95
HMGB1P31-201ENST00000437242 HSPA1BP0DMV9 641 aaKnown RBP2.89□□□□□ -1.95
HMGB1P31-201ENST00000437242 CEACAM1P13688 526 aa2.89□□□□□ -1.95
HMGB1P31-201ENST00000437242 GNAZP19086 355 aa2.89□□□□□ -1.95
HMGB1P31-201ENST00000437242 CAPN3P20807 821 aa2.89□□□□□ -1.95
HMGB1P31-201ENST00000437242 GABRB2P47870 512 aa2.89□□□□□ -1.95
HMGB1P31-201ENST00000437242 EIF5P55010 431 aaKnown RBP2.89□□□□□ -1.95
HMGB1P31-201ENST00000437242 EIF3BP55884 814 aaKnown RBP2.89□□□□□ -1.95
HMGB1P31-201ENST00000437242 CLDN20P56880 219 aa2.89□□□□□ -1.95
HMGB1P31-201ENST00000437242 UFM1P61960 85 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 174.9 ms