RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 TRIP11Q15643 1979 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 A0A0G2JMP0 313 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 RPS6KA4O75676 772 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 JCHAINP01591 159 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 GLULP15104 373 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 HRH2P25021 359 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 KCNK10P57789 538 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 CYP4F2P78329 520 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 CYP4F3Q08477 520 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 CAPSQ13938 189 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 ZNF789Q5FWF6 425 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 EEF1DP3Q658K8 133 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 C8orf82Q6P1X6 216 aaPredicted RBP7.39□□□□□ -1.23
CPSF6-202ENST00000435070 BEND5Q7L4P6 421 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 FLAD1Q8NFF5 587 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 GTF2H4Q92759 462 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 ST6GAL2Q96JF0 529 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 Q96MT0 163 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 ZNF300Q96RE9 604 aaPredicted RBP7.39□□□□□ -1.23
CPSF6-202ENST00000435070 HBEGFQ99075 208 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 KCNS3Q9BQ31 491 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 MRPL57Q9BQC6 102 aaKnown RBP7.39□□□□□ -1.23
CPSF6-202ENST00000435070 TMX2Q9Y320 296 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 STYXL1Q9Y6J8 313 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 PSME4Q14997 1843 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 UPK1AO00322 258 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 CCL22O00626 93 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 B4GALT5O43286 388 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 AIREO43918 545 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 MED26O95402 600 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 CSF2P04141 144 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 FCHO2Q0JRZ9 810 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 CDK5R2Q13319 367 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 FXNQ16595 210 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 PPP1R26Q5T8A7 1209 aaPredicted RBP7.39□□□□□ -1.23
CPSF6-202ENST00000435070 FAM205BPQ63HN1 556 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 ENPP6Q6UWR7 440 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 MINDY1Q8N5J2 469 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 RNF149Q8NC42 400 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 OR52K2Q8NGK3 314 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 SPATA22Q8NHS9 363 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 CLEC4DQ8WXI8 215 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.39□□□□□ -1.231e-6■■■■■ 31.4
CPSF6-202ENST00000435070 MBOAT4Q96T53 435 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 LRRC4Q9HBW1 653 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 ABCD2Q9UBJ2 740 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 POLHQ9Y253 713 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 PCDHGA10Q9Y5H3 936 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 HCRTO43612 131 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 PTTG1O95997 202 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 HOXC6P09630 235 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 HSMCR30P0CW71 290 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 KCNC1P48547 511 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 ARMC4Q5T2S8 1044 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 HHIPL2Q6UWX4 724 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 BEST2Q8NFU1 509 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 BRSK1Q8TDC3 778 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 NSUN5Q96P11 429 aaKnown RBP7.39□□□□□ -1.23
CPSF6-202ENST00000435070 TBCBQ99426 244 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 TMLHEQ9NVH6 421 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 SIX4Q9UIU6 781 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 OR6C70A6NIJ9 312 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 PDHXO00330 501 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 ARHGAP33O14559 1287 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 FAM20BO75063 409 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 STBD1O95210 358 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 ADORA2BP29275 332 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 ISL1P61371 349 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 UFM1P61960 85 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 SLC6A3Q01959 620 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 ZNF181Q2M3W8 571 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 FAM98BQ52LJ0 330 aaKnown RBP7.39□□□□□ -1.23
CPSF6-202ENST00000435070 CES5AQ6NT32 575 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 PRMT9Q6P2P2 845 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 SLC26A9Q7LBE3 791 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 LACC1Q8IV20 430 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 C1orf127Q8N9H9 656 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 IPMKQ8NFU5 416 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 ROGDIQ9GZN7 287 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 JPH1Q9HDC5 661 aaPredicted RBP7.39□□□□□ -1.23
CPSF6-202ENST00000435070 TMEM39AQ9NV64 488 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 POLR3BQ9NW08 1133 aaPredicted RBP7.39□□□□□ -1.23
CPSF6-202ENST00000435070 FKBP14Q9NWM8 211 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 KLHL20Q9Y2M5 609 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 PCDHA9Q9Y5H5 950 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 DNAJC15Q9Y5T4 150 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 NUP214P35658 2090 aaPredicted RBP7.39□□□□□ -1.23
CPSF6-202ENST00000435070 FOCADQ5VW36 1801 aa7.39□□□□□ -1.23
CPSF6-202ENST00000435070 BCKDKO14874 412 aa7.38□□□□□ -1.23
CPSF6-202ENST00000435070 MDM4O15151 490 aa7.38□□□□□ -1.23
CPSF6-202ENST00000435070 SELPLGQ14242 412 aa7.38□□□□□ -1.23
CPSF6-202ENST00000435070 SOWAHAQ2M3V2 549 aa7.38□□□□□ -1.23
CPSF6-202ENST00000435070 SPANXN2Q5MJ10 180 aa7.38□□□□□ -1.23
CPSF6-202ENST00000435070 ZNF517Q6ZMY9 492 aaPredicted RBP7.38□□□□□ -1.23
CPSF6-202ENST00000435070 GLRX5Q86SX6 157 aa7.38□□□□□ -1.23
CPSF6-202ENST00000435070 AMIGO1Q86WK6 493 aa7.38□□□□□ -1.23
CPSF6-202ENST00000435070 FAM109AQ8N4B1 249 aa7.38□□□□□ -1.23
CPSF6-202ENST00000435070 DTWD1Q8N5C7 304 aa7.38□□□□□ -1.23
CPSF6-202ENST00000435070 PCNPQ8WW12 178 aaKnown RBP7.38□□□□□ -1.23
CPSF6-202ENST00000435070 KHSRPQ92945 711 aaKnown RBP eCLIP7.38□□□□□ -1.233e-7■■■□□ 15.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms